Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:56:47 (3557262): wrapper (7.7.26015): starting
03:56:47 (3557262): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 03:56:47] Arguments: --nthreads 12
[2025-06-04 03:56:47] Threads: 12
[2025-06-04 03:56:47] Checking for CVMFS
[2025-06-04 03:56:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:56:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:56:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:56:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:56:47] 2.11.5.0 2578 50802 219180 146777 1 339 27163643 45568001 20892 130560 0 431706142 99.783 300159093 20948 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 03:56:47] CVMFS is ok
[2025-06-04 03:56:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:56:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:56:47] Further information can be found at the LHC@home message board.
[2025-06-04 03:56:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:56:47] Checking for apptainer binary...
[2025-06-04 03:56:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:56:47] Running /usr/bin/apptainer --version
[2025-06-04 03:56:47] apptainer version 1.4.0-1.el9
[2025-06-04 03:56:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:56:48] wns0111.triumf.lcg
[2025-06-04 03:56:48] apptainer works
[2025-06-04 03:56:48] Set ATHENA_PROC_NUMBER=12
[2025-06-04 03:56:48] Set ATHENA_CORE_NUMBER=12
[2025-06-04 03:56:48] Starting ATLAS job with PandaID=6679374939
[2025-06-04 03:56:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:00:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | WARNING  | found no stored workdir sizes
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | WARNING  | wrong length of table data, x=[1749034648.0], y=[1577.0] (must be same and length>=4)
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | ..............................
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . Timing measurements:
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . get job = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . initial setup = 3 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . payload setup = 6 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . stage-in = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . payload execution = 22 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . stage-out = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . log creation = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | ..............................
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:00:04] 2025-06-04 10:59:51,952 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679374939/pilotlog.txt
[2025-06-04 04:00:04] 2025-06-04 10:59:51,967 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 04:00:04] - Log from pilotlog.txt -
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | INFO     | extracted standard info from prmon json
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | WARNING  | found no stored workdir sizes
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | WARNING  | wrong length of table data, x=[1749034648.0], y=[1577.0] (must be same and length>=4)
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | ..............................
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . Timing measurements:
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . get job = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . initial setup = 3 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . payload setup = 6 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . stage-in = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . payload execution = 22 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . stage-out = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . log creation = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | ..............................
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:00:04] 2025-06-04 10:59:51,952 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679374939/pilotlog.txt
[2025-06-04 04:00:04] 2025-06-04 10:59:51,967 | WARNING  | 
[2025-06-04 04:00:04] [begin log extracts]
[2025-06-04 04:00:04] - Log from pilotlog.txt -
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | INFO     | extracted standard info from prmon json
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:00:04] 2025-06-04 10:59:51,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | WARNING  | found no stored workdir sizes
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:00:04] 2025-06-04 10:59:51,950 | WARNING  | wrong length of table data, x=[1749034648.0], y=[1577.0] (must be same and length>=4)
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | ..............................
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . Timing measurements:
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . get job = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . initial setup = 3 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . payload setup = 6 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . stage-in = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . payload execution = 22 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . stage-out = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | . log creation = 0 s
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | ..............................
[2025-06-04 04:00:04] 2025-06-04 10:59:51,951 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:00:04] 2025-06-04 10:59:51,952 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679374939/pilotlog.txt
[2025-06-04 04:00:04] [end log extracts]
[2025-06-04 04:00:04] 2025-06-04 10:59:51,968 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 04:00:04] 2025-06-04 10:59:51,969 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | 
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | job summary report
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | --------------------------------------------------
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | PanDA job id: 6679374939
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | task id: 45006595
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 03:57:40,727 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | pilot state: failed 
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | transexitcode: 65
[2025-06-04 04:00:04] 2025-06-04 10:59:52,122 | INFO     | exeerrorcode: 65
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | exitcode: 65
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | cpuconsumptiontime: 21 s
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | nevents: 0
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | neventsw: 0
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | pid: 3569035
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | pgrp: 3569035
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | corecount: 12
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | event service: False
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | sizes: {0: 2405131, 5: 2405337, 11: 2405393, 32: 2428626, 33: 2432861, 35: 2432917, 155: 2433187}
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | --------------------------------------------------
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | 
[2025-06-04 04:00:04] 2025-06-04 10:59:52,123 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 04:00:04] 2025-06-04 10:59:52,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:00:04] 2025-06-04 10:59:52,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:00:04] 2025-06-04 10:59:52,154 | INFO     | job 6679374939 has completed (purged errors)
[2025-06-04 04:00:04] 2025-06-04 10:59:52,155 | INFO     | overall cleanup function is called
[2025-06-04 04:00:04] 2025-06-04 10:59:53,160 | INFO     | --- collectZombieJob: --- 10, [3569035]
[2025-06-04 04:00:04] 2025-06-04 10:59:53,160 | INFO     | zombie collector waiting for pid 3569035
[2025-06-04 04:00:04] 2025-06-04 10:59:53,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:00:04] 2025-06-04 10:59:53,161 | INFO     | collected zombie processes
[2025-06-04 04:00:04] 2025-06-04 10:59:53,161 | INFO     | will attempt to kill all subprocesses of pid=3569035
[2025-06-04 04:00:04] 2025-06-04 10:59:53,426 | INFO     | process IDs to be killed: [3569035] (in reverse order)
[2025-06-04 04:00:04] 2025-06-04 10:59:53,525 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:00:04] 2025-06-04 10:59:53,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:00:04] 2025-06-04 10:59:53,539 | INFO     | did not find any defunct processes belonging to 3569035
[2025-06-04 04:00:04] 2025-06-04 10:59:53,549 | INFO     | did not find any defunct processes belonging to 3569035
[2025-06-04 04:00:04] 2025-06-04 10:59:53,550 | INFO     | ready for new job
[2025-06-04 04:00:04] 2025-06-04 10:59:53,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:00:04] 2025-06-04 10:59:53,552 | INFO     | **************************************
[2025-06-04 04:00:04] 2025-06-04 10:59:53,552 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:00:04] 2025-06-04 10:59:53,552 | INFO     | **************************************
[2025-06-04 04:00:04] 2025-06-04 10:59:53,552 | INFO     | 
[2025-06-04 04:00:04] 2025-06-04 10:59:53,554 | INFO     | architecture information:
[2025-06-04 04:00:04] 2025-06-04 10:59:53,555 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:00:04] 2025-06-04 10:59:53,571 | INFO     | cat /etc/os-release:
[2025-06-04 04:00:04] NAME="CentOS Linux"
[2025-06-04 04:00:04] VERSION="7 (Core)"
[2025-06-04 04:00:04] ID="centos"
[2025-06-04 04:00:04] ID_LIKE="rhel fedora"
[2025-06-04 04:00:04] VERSION_ID="7"
[2025-06-04 04:00:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:00:04] ANSI_COLOR="0;31"
[2025-06-04 04:00:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:00:04] HOME_URL="https://www.centos.org/"
[2025-06-04 04:00:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:00:04] 
[2025-06-04 04:00:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:00:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:00:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:00:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:00:04] 
[2025-06-04 04:00:04] 2025-06-04 10:59:53,571 | INFO     | **************************************
[2025-06-04 04:00:04] 2025-06-04 10:59:54,075 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 04:00:04] 2025-06-04 10:59:54,095 | INFO     | sufficient remaining disk space (1832682258432 B)
[2025-06-04 04:00:04] 2025-06-04 10:59:54,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:00:04] 2025-06-04 10:59:54,096 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:00:04] 2025-06-04 10:59:54,096 | INFO     | update_server=False
[2025-06-04 04:00:04] 2025-06-04 10:59:54,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:00:04] 2025-06-04 10:59:54,096 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:00:04] 2025-06-04 10:59:54,097 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:00:04] 2025-06-04 10:59:54,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:00:04] 2025-06-04 10:59:54,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:00:04] 2025-06-04 10:59:54,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:00:04] 2025-06-04 10:59:54,217 | INFO     | aborting loop
[2025-06-04 04:00:04] 2025-06-04 10:59:54,724 | INFO     | all job control threads have been joined
[2025-06-04 04:00:04] 2025-06-04 10:59:55,059 | INFO     | all data control threads have been joined
[2025-06-04 04:00:04] 2025-06-04 10:59:55,101 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:55,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:00:04] 2025-06-04 10:59:55,222 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:55,321 | INFO     | all payload control threads have been joined
[2025-06-04 04:00:04] 2025-06-04 10:59:55,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:00:04] 2025-06-04 10:59:55,347 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:55,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:55,730 | INFO     | [job] control thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:55,890 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:55,947 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:56,065 | INFO     | [data] control thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:56,245 | INFO     | [job] validate thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:56,327 | INFO     | [payload] control thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:56,428 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:56,592 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:56,621 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:57,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:00:04] 2025-06-04 10:59:57,170 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:58,065 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:59,350 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:00:04] 2025-06-04 10:59:59,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174044657472)>', '<ExcThread(monitor, started 140173237024512)>']
[2025-06-04 04:00:04] 2025-06-04 11:00:00,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:00:04] 2025-06-04 11:00:00,132 | INFO     | [monitor] control thread has ended
[2025-06-04 04:00:04] 2025-06-04 11:00:04,552 | INFO     | all workflow threads have been joined
[2025-06-04 04:00:04] 2025-06-04 11:00:04,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:00:04] 2025-06-04 11:00:04,553 | INFO     | traces error code: 0
[2025-06-04 04:00:04] 2025-06-04 11:00:04,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:00:04] 2025-06-04 11:00:04,712 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:00:04] 2025-06-04 11:00:04,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:00:04] 2025-06-04 11:00:04,720 [wrapper] pilotpid: 3562706
[2025-06-04 04:00:04] 2025-06-04 11:00:04,722 [wrapper] Pilot exit status: 0
[2025-06-04 04:00:04] 2025-06-04 11:00:04,734 [wrapper] pandaids: 6679374939
[2025-06-04 04:00:04] 2025-06-04 11:00:04,803 [wrapper] cleanup supervisor_pilot 3562712 3562707
[2025-06-04 04:00:04] 2025-06-04 11:00:04,807 [wrapper] Test setup, not cleaning
[2025-06-04 04:00:04] 2025-06-04 11:00:04,811 [wrapper] apfmon messages muted
[2025-06-04 04:00:04] 2025-06-04 11:00:04,814 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:00:04] 2025-06-04 11:00:04,817 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:00:04]  *** Error codes and diagnostics ***
[2025-06-04 04:00:04]     "exeErrorCode": 65,
[2025-06-04 04:00:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:00:04]     "pilotErrorCode": 1305,
[2025-06-04 04:00:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:00:04]  *** Listing of results directory ***
[2025-06-04 04:00:04] total 214260
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:46 pilot3.tar.gz
[2025-06-04 04:00:04] -rwx------. 1 boinc boinc     37140 Jun  4 02:01 runpilot2-wrapper.sh
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:01 queuedata.json
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:00:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:56 run_atlas
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:56 job.xml
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc      6597 Jun  4 03:56 init_data.xml
[2025-06-04 04:00:04] -rw-r--r--. 2 boinc boinc 215382471 Jun  4 03:56 EVNT.45006593._001096.pool.root.1
[2025-06-04 04:00:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:56 start_atlas.sh
[2025-06-04 04:00:04] drwxrwx--x. 2 boinc boinc      4096 Jun  4 03:56 shared
[2025-06-04 04:00:04] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:56 input.tar.gz
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:56 boinc_lockfile
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc      2525 Jun  4 03:56 pandaJob.out
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc    986812 Jun  4 03:56 agis_schedconf.cvmfs.json
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc   1603667 Jun  4 03:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:00:04] drwx------. 4 boinc boinc      4096 Jun  4 03:57 pilot3
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc       522 Jun  4 03:57 boinc_task_state.xml
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc       981 Jun  4 03:57 memory_monitor_summary.json
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc     20241 Jun  4 03:57 log.45006595._056229.job.log.tgz.1
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc        95 Jun  4 03:58 pilot_heartbeat.json
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc      8347 Jun  4 03:59 heartbeat.json
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:00 boinc_mmap_file
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc      4475 Jun  4 04:00 pilotlog.txt
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc        22 Jun  4 04:00 wrapper_checkpoint.txt
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc     73600 Jun  4 04:00 log.45006595._056229.job.log.1
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc       188 Jun  4 04:00 output.list
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:00 runtime_log
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc    112640 Jun  4 04:00 result.tar.gz
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc      8484 Jun  4 04:00 runtime_log.err
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc       648 Jun  4 04:00 CmLKDmZBzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaunKDmcJmBCo.diag
[2025-06-04 04:00:04] -rw-r--r--. 1 boinc boinc     21482 Jun  4 04:00 stderr.txt
[2025-06-04 04:00:04] No HITS result produced
[2025-06-04 04:00:04]  *** Contents of shared directory: ***
[2025-06-04 04:00:04] total 210968
[2025-06-04 04:00:04] -rw-r--r--. 2 boinc boinc 215382471 Jun  4 03:56 ATLAS.root_0
[2025-06-04 04:00:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:56 start_atlas.sh
[2025-06-04 04:00:04] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:56 input.tar.gz
[2025-06-04 04:00:04] -rw-------. 1 boinc boinc    112640 Jun  4 04:00 result.tar.gz
04:00:06 (3557262): run_atlas exited; CPU time 25.755711
04:00:06 (3557262): called boinc_finish(0)

</stderr_txt>
]]>

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