Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:43:25 (3681985): wrapper (7.7.26015): starting
12:43:25 (3681985): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 12:43:25] Arguments: --nthreads 4
[2025-06-04 12:43:25] Threads: 4
[2025-06-04 12:43:25] Checking for CVMFS
[2025-06-04 12:43:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:43:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:43:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:43:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:43:26] 2.12.7.0 963705 1210 56104 146779 0 187 3508514 4096001 6419 130560 0 7345663 99.998 316326 1544 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-06-04 12:43:26] CVMFS is ok
[2025-06-04 12:43:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:43:26] Checking for apptainer binary...
[2025-06-04 12:43:26] apptainer is not installed, using version from CVMFS
[2025-06-04 12:43:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:43:26] senture-z10pe-l
[2025-06-04 12:43:26] apptainer works
[2025-06-04 12:43:26] Set ATHENA_PROC_NUMBER=4
[2025-06-04 12:43:26] Set ATHENA_CORE_NUMBER=4
[2025-06-04 12:43:26] Starting ATLAS job with PandaID=6679371135
[2025-06-04 12:43:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:03:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:03:07] 2025-06-04 15:02:52,167 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6679371135/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,167 | INFO     | extracted standard info from prmon json
[2025-06-04 16:03:07] 2025-06-04 15:02:52,168 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:03:07] 2025-06-04 15:02:52,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:03:07] 2025-06-04 15:02:52,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:03:07] 2025-06-04 15:02:52,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:03:07] 2025-06-04 15:02:52,172 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:03:07] 2025-06-04 15:02:52,172 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,173 | INFO     | sum of deviations: -23157324043.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,173 | INFO     | mean x: 1749043387.5
[2025-06-04 16:03:07] 2025-06-04 15:02:52,173 | INFO     | mean y: 2321263.397959184
[2025-06-04 16:03:07] 2025-06-04 15:02:52,173 | INFO     | -- intersect: 17350489409.49922
[2025-06-04 16:03:07] 2025-06-04 15:02:52,173 | INFO     | intersect: 17350489409.49922
[2025-06-04 16:03:07] 2025-06-04 15:02:52,174 | INFO     | chi2: 1.9721653282021774
[2025-06-04 16:03:07] 2025-06-04 15:02:52,174 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,175 | INFO     | sum of deviations: -10495023403.999998
[2025-06-04 16:03:07] 2025-06-04 15:02:52,175 | INFO     | mean x: 1749043235.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,175 | INFO     | mean y: 2332131.4659685865
[2025-06-04 16:03:07] 2025-06-04 15:02:52,175 | INFO     | -- intersect: 8498387529.887255
[2025-06-04 16:03:07] 2025-06-04 15:02:52,175 | INFO     | intersect: 8498387529.887255
[2025-06-04 16:03:07] 2025-06-04 15:02:52,176 | INFO     | chi2: 1.1802277518801465
[2025-06-04 16:03:07] 2025-06-04 15:02:52,176 | INFO     | current chi2=1.1802277518801465 (change=40.15573973425239 %)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,176 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 16:03:07] 2025-06-04 15:02:52,177 | INFO     | sum of deviations: -10179899813.499998
[2025-06-04 16:03:07] 2025-06-04 15:02:52,177 | INFO     | mean x: 1749043082.5
[2025-06-04 16:03:07] 2025-06-04 15:02:52,177 | INFO     | mean y: 2332422.2419354836
[2025-06-04 16:03:07] 2025-06-04 15:02:52,177 | INFO     | -- intersect: 8925916253.377232
[2025-06-04 16:03:07] 2025-06-04 15:02:52,177 | INFO     | intersect: 8925916253.377232
[2025-06-04 16:03:07] 2025-06-04 15:02:52,178 | INFO     | chi2: 1.179054907267925
[2025-06-04 16:03:07] 2025-06-04 15:02:52,178 | INFO     | current chi2=1.179054907267925 (change=0.0993744309395421 %)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,178 | INFO     | right removable region: 185
[2025-06-04 16:03:07] 2025-06-04 15:02:52,178 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,179 | INFO     | sum of deviations: -38802113359.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,179 | INFO     | mean x: 1749043540.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,179 | INFO     | mean y: 2334672.952879581
[2025-06-04 16:03:07] 2025-06-04 15:02:52,179 | INFO     | -- intersect: 31413885602.46806
[2025-06-04 16:03:07] 2025-06-04 15:02:52,179 | INFO     | intersect: 31413885602.46806
[2025-06-04 16:03:07] 2025-06-04 15:02:52,180 | INFO     | chi2: 0.9206993390386154
[2025-06-04 16:03:07] 2025-06-04 15:02:52,180 | INFO     | current chi2=0.9206993390386154 (change=53.31530648711266 %)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,180 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 16:03:07] 2025-06-04 15:02:52,181 | INFO     | sum of deviations: -34415753876.5
[2025-06-04 16:03:07] 2025-06-04 15:02:52,181 | INFO     | mean x: 1749043692.5
[2025-06-04 16:03:07] 2025-06-04 15:02:52,181 | INFO     | mean y: 2330622.446236559
[2025-06-04 16:03:07] 2025-06-04 15:02:52,181 | INFO     | -- intersect: 30170797656.903957
[2025-06-04 16:03:07] 2025-06-04 15:02:52,181 | INFO     | intersect: 30170797656.903957
[2025-06-04 16:03:07] 2025-06-04 15:02:52,182 | INFO     | chi2: 0.9166188806274336
[2025-06-04 16:03:07] 2025-06-04 15:02:52,182 | INFO     | current chi2=0.9166188806274336 (change=0.4431911958840599 %)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,182 | INFO     | left removable region: 20
[2025-06-04 16:03:07] 2025-06-04 15:02:52,182 | INFO     | sum of square deviations: 1392881930.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,183 | INFO     | sum of deviations: -12779456080.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,183 | INFO     | mean x: 1749043662.0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,183 | INFO     | mean y: 2333245.4484848483
[2025-06-04 16:03:07] 2025-06-04 15:02:52,183 | INFO     | -- intersect: 16049512966.224506
[2025-06-04 16:03:07] 2025-06-04 15:02:52,183 | INFO     | intersect: 16049512966.224506
[2025-06-04 16:03:07] 2025-06-04 15:02:52,184 | INFO     | chi2: 0.08283508975140642
[2025-06-04 16:03:07] 2025-06-04 15:02:52,184 | INFO     | -- intersect: 16049512966.224506
[2025-06-04 16:03:07] 2025-06-04 15:02:52,184 | INFO     | current memory leak: -9.17 B/s (using 165 data points, chi2=0.08)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | ..............................
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . Timing measurements:
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . get job = 0 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . initial setup = 1 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . payload setup = 5 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . stage-in = 0 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . payload execution = 11924 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . stage-out = 1 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | . log creation = 0 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,185 | INFO     | ..............................
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | 
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | job summary report
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | --------------------------------------------------
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | PanDA job id: 6679371135
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | task id: 44871837
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | errors: (none)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | pilot state: finished 
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | transexitcode: 0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | exeerrorcode: 0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,687 | INFO     | exeerrordiag: 
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | exitcode: 0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | exitmsg: OK
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | cpuconsumptiontime: 46225 s
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | nevents: 400
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | neventsw: 0
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | pid: 3692749
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | pgrp: 3692749
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | corecount: 4
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | event service: False
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | sizes: {0: 2397394, 1: 2397394, 4: 2397628, 11: 2397656, 11933: 2426904, 11936: 2436043, 11942: 2436157}
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | --------------------------------------------------
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | 
[2025-06-04 16:03:07] 2025-06-04 15:02:52,688 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-06-04 16:03:07] 2025-06-04 15:02:52,719 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | job 6679371135 has completed (purged errors)
[2025-06-04 16:03:07] 2025-06-04 15:02:52,721 | INFO     | overall cleanup function is called
[2025-06-04 16:03:07] 2025-06-04 15:02:53,729 | INFO     | --- collectZombieJob: --- 10, [3692749]
[2025-06-04 16:03:07] 2025-06-04 15:02:53,729 | INFO     | zombie collector waiting for pid 3692749
[2025-06-04 16:03:07] 2025-06-04 15:02:53,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:03:07] 2025-06-04 15:02:53,730 | INFO     | collected zombie processes
[2025-06-04 16:03:07] 2025-06-04 15:02:53,730 | INFO     | will attempt to kill all subprocesses of pid=3692749
[2025-06-04 16:03:07] 2025-06-04 15:02:54,012 | INFO     | process IDs to be killed: [3692749] (in reverse order)
[2025-06-04 16:03:07] 2025-06-04 15:02:54,151 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:03:07] 2025-06-04 15:02:54,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:03:07] 2025-06-04 15:02:54,160 | INFO     | did not find any defunct processes belonging to 3692749
[2025-06-04 16:03:07] 2025-06-04 15:02:54,168 | INFO     | did not find any defunct processes belonging to 3692749
[2025-06-04 16:03:07] 2025-06-04 15:02:54,168 | INFO     | ready for new job
[2025-06-04 16:03:07] 2025-06-04 15:02:54,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:03:07] 2025-06-04 15:02:54,170 | INFO     | **************************************
[2025-06-04 16:03:07] 2025-06-04 15:02:54,170 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:03:07] 2025-06-04 15:02:54,170 | INFO     | **************************************
[2025-06-04 16:03:07] 2025-06-04 15:02:54,170 | INFO     | 
[2025-06-04 16:03:07] 2025-06-04 15:02:54,173 | INFO     | pilot is running in a VM
[2025-06-04 16:03:07] 2025-06-04 15:02:54,173 | INFO     | architecture information:
[2025-06-04 16:03:07] 2025-06-04 15:02:54,174 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:03:07] 2025-06-04 15:02:54,191 | INFO     | cat /etc/os-release:
[2025-06-04 16:03:07] NAME="CentOS Linux"
[2025-06-04 16:03:07] VERSION="7 (Core)"
[2025-06-04 16:03:07] ID="centos"
[2025-06-04 16:03:07] ID_LIKE="rhel fedora"
[2025-06-04 16:03:07] VERSION_ID="7"
[2025-06-04 16:03:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:03:07] ANSI_COLOR="0;31"
[2025-06-04 16:03:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:03:07] HOME_URL="https://www.centos.org/"
[2025-06-04 16:03:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:03:07] 
[2025-06-04 16:03:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:03:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:03:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:03:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:03:07] 
[2025-06-04 16:03:07] 2025-06-04 15:02:54,192 | INFO     | **************************************
[2025-06-04 16:03:07] 2025-06-04 15:02:54,695 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-06-04 16:03:07] 2025-06-04 15:02:54,715 | INFO     | sufficient remaining disk space (111174221824 B)
[2025-06-04 16:03:07] 2025-06-04 15:02:54,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:03:07] 2025-06-04 15:02:54,716 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:03:07] 2025-06-04 15:02:54,716 | INFO     | update_server=False
[2025-06-04 16:03:07] 2025-06-04 15:02:54,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:03:07] 2025-06-04 15:02:54,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:03:07] 2025-06-04 15:02:54,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:03:07] 2025-06-04 15:02:54,717 | INFO     | aborting loop
[2025-06-04 16:03:07] 2025-06-04 15:02:54,739 | INFO     | all data control threads have been joined
[2025-06-04 16:03:07] 2025-06-04 15:02:55,025 | INFO     | all job control threads have been joined
[2025-06-04 16:03:07] 2025-06-04 15:02:55,400 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:03:07] 2025-06-04 15:02:55,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:03:07] 2025-06-04 15:02:55,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:03:07] 2025-06-04 15:02:55,721 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:55,722 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:55,743 | INFO     | [data] control thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,010 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,025 | INFO     | [job] control thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,145 | INFO     | all payload control threads have been joined
[2025-06-04 16:03:07] 2025-06-04 15:02:56,150 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,305 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,444 | INFO     | [job] validate thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,575 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:03:07] 2025-06-04 15:02:56,722 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,781 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:56,890 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:57,150 | INFO     | [payload] control thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:02:57,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:03:07] 2025-06-04 15:02:58,283 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:03:00,595 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:03:07] 2025-06-04 15:03:02,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133105480881984)>', '<ExcThread(monitor, started 133104584877824)>']
[2025-06-04 16:03:07] 2025-06-04 15:03:03,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:03:07] 2025-06-04 15:03:03,426 | INFO     | [monitor] control thread has ended
[2025-06-04 16:03:07] 2025-06-04 15:03:07,538 | INFO     | all workflow threads have been joined
[2025-06-04 16:03:07] 2025-06-04 15:03:07,538 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:03:07] 2025-06-04 15:03:07,538 | INFO     | traces error code: 0
[2025-06-04 16:03:07] 2025-06-04 15:03:07,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:03:07] 2025-06-04 15:03:07,697 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:03:07] 2025-06-04 15:03:07,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:03:07] 2025-06-04 15:03:07,705 [wrapper] pilotpid: 3685847
[2025-06-04 16:03:07] 2025-06-04 15:03:07,708 [wrapper] Pilot exit status: 0
[2025-06-04 16:03:07] 2025-06-04 15:03:07,721 [wrapper] pandaids: 6679371135
[2025-06-04 16:03:07] 2025-06-04 15:03:07,791 [wrapper] cleanup supervisor_pilot 4177309 3685848
[2025-06-04 16:03:07] 2025-06-04 15:03:07,795 [wrapper] Test setup, not cleaning
[2025-06-04 16:03:07] 2025-06-04 15:03:07,811 [wrapper] apfmon messages muted
[2025-06-04 16:03:07] 2025-06-04 15:03:07,821 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:03:07] 2025-06-04 15:03:07,826 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:03:07]  *** Error codes and diagnostics ***
[2025-06-04 16:03:07]     "exeErrorCode": 0,
[2025-06-04 16:03:07]     "exeErrorDiag": "",
[2025-06-04 16:03:07]     "pilotErrorCode": 0,
[2025-06-04 16:03:07]     "pilotErrorDiag": "",
[2025-06-04 16:03:07]  *** Listing of results directory ***
[2025-06-04 16:03:07] total 420316
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc    495897 Jun  4 09:46 pilot3.tar.gz
[2025-06-04 16:03:07] -rwx------ 1 boinc boinc     37140 Jun  4 10:01 runpilot2-wrapper.sh
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:01 queuedata.json
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:03:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:43 run_atlas
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:43 job.xml
[2025-06-04 16:03:07] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:43 shared
[2025-06-04 16:03:07] -rw-r--r-- 2 boinc boinc    508881 Jun  4 12:43 input.tar.gz
[2025-06-04 16:03:07] -rw-r--r-- 2 boinc boinc 223591491 Jun  4 12:43 EVNT.44871834._000844.pool.root.1
[2025-06-04 16:03:07] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:43 start_atlas.sh
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:43 boinc_lockfile
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc      2556 Jun  4 12:43 pandaJob.out
[2025-06-04 16:03:07] -rw------- 1 boinc boinc    986812 Jun  4 12:43 agis_schedconf.cvmfs.json
[2025-06-04 16:03:07] drwx------ 4 boinc boinc      4096 Jun  4 12:43 pilot3
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc      6668 Jun  4 13:25 init_data.xml
[2025-06-04 16:03:07] -rw------- 1 boinc boinc 200169575 Jun  4 16:02 HITS.44871837._102175.pool.root.1
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc       531 Jun  4 16:02 boinc_task_state.xml
[2025-06-04 16:03:07] -rw------- 1 boinc boinc        95 Jun  4 16:02 pilot_heartbeat.json
[2025-06-04 16:03:07] -rw------- 1 boinc boinc      1031 Jun  4 16:02 memory_monitor_summary.json
[2025-06-04 16:03:07] -rw------- 1 boinc boinc   1598969 Jun  4 16:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:03:07] -rw------- 1 boinc boinc    299369 Jun  4 16:02 log.44871837._102175.job.log.tgz.1
[2025-06-04 16:03:07] -rw------- 1 boinc boinc      7686 Jun  4 16:02 heartbeat.json
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:03 boinc_mmap_file
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc        28 Jun  4 16:03 wrapper_checkpoint.txt
[2025-06-04 16:03:07] -rw------- 1 boinc boinc      4423 Jun  4 16:03 pilotlog.txt
[2025-06-04 16:03:07] -rw------- 1 boinc boinc   1103201 Jun  4 16:03 log.44871837._102175.job.log.1
[2025-06-04 16:03:07] -rw------- 1 boinc boinc       357 Jun  4 16:03 output.list
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:03 runtime_log
[2025-06-04 16:03:07] -rw------- 1 boinc boinc   1423360 Jun  4 16:03 result.tar.gz
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc      8749 Jun  4 16:03 runtime_log.err
[2025-06-04 16:03:07] -rw------- 1 boinc boinc       652 Jun  4 16:03 KoIODmYBzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQunKDmDh2qSo.diag
[2025-06-04 16:03:07] -rw-r--r-- 1 boinc boinc     20516 Jun  4 16:03 stderr.txt
[2025-06-04 16:03:07] HITS file was successfully produced:
[2025-06-04 16:03:07] -rw------- 1 boinc boinc 200169575 Jun  4 16:02 shared/HITS.pool.root.1
[2025-06-04 16:03:07]  *** Contents of shared directory: ***
[2025-06-04 16:03:07] total 415748
[2025-06-04 16:03:07] -rw-r--r-- 2 boinc boinc    508881 Jun  4 12:43 input.tar.gz
[2025-06-04 16:03:07] -rw-r--r-- 2 boinc boinc 223591491 Jun  4 12:43 ATLAS.root_0
[2025-06-04 16:03:07] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:43 start_atlas.sh
[2025-06-04 16:03:07] -rw------- 1 boinc boinc 200169575 Jun  4 16:02 HITS.pool.root.1
[2025-06-04 16:03:07] -rw------- 1 boinc boinc   1423360 Jun  4 16:03 result.tar.gz
16:03:09 (3681985): run_atlas exited; CPU time 46628.051429
16:03:09 (3681985): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN