Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:57:23 (1426018): wrapper (7.7.26015): starting
06:57:23 (1426018): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:57:23] Arguments: --nthreads 8
[2025-06-04 06:57:23] Threads: 8
[2025-06-04 06:57:23] Checking for CVMFS
[2025-06-04 06:57:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:57:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:57:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:57:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:57:23] 2.12.6.0 311205 23202 554192 146777 0 678 31864763 40960000 13852 16776704 1 126078228 99.726 88336562 24931 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:57:23] CVMFS is ok
[2025-06-04 06:57:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:57:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:57:23] Further information can be found at the LHC@home message board.
[2025-06-04 06:57:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:57:23] Checking for apptainer binary...
[2025-06-04 06:57:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:57:23] Running /usr/bin/apptainer --version
[2025-06-04 06:57:23] apptainer version 1.4.1-1.el9
[2025-06-04 06:57:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:57:24] c7-10-13.aglt2.org
[2025-06-04 06:57:24] apptainer works
[2025-06-04 06:57:24] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:57:24] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:57:24] Starting ATLAS job with PandaID=6678364403
[2025-06-04 06:57:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:01:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:01:05]  is_altstaged=None
[2025-06-04 08:01:05]  is_tar=False
[2025-06-04 08:01:05]  lfn=log.45006595._053903.job.log.tgz.1
[2025-06-04 08:01:05]  mtime=0
[2025-06-04 08:01:05]  protocol_id=None
[2025-06-04 08:01:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:01:05]  replicas=None
[2025-06-04 08:01:05]  scope=mc23_13p6TeV
[2025-06-04 08:01:05]  status=None
[2025-06-04 08:01:05]  status_code=0
[2025-06-04 08:01:05]  storage_token=
[2025-06-04 08:01:05]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678364403/log.45006595._053903.job.log.tgz.1
[2025-06-04 08:01:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/f9/log.45006595._053903.job.log.tgz.1
[2025-06-04 08:01:05]  workdir=None
[2025-06-04 08:01:05] ]
[2025-06-04 08:01:05] 2025-06-04 12:00:38,933 | INFO     | transferring file log.45006595._053903.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678364403/log.45006595._053903.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:01:05] 2025-06-04 12:00:38,933 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678364403/log.45006595._053903.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._053903.job
[2025-06-04 08:01:05] 2025-06-04 12:00:38,947 | INFO     | adding to output.list: log.45006595._053903.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/f9/log.45006595._053903.job.log.tg
[2025-06-04 08:01:05] 2025-06-04 12:00:38,948 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:01:05] 2025-06-04 12:00:38,948 | INFO     | summary of transferred files:
[2025-06-04 08:01:05] 2025-06-04 12:00:38,948 | INFO     |  -- lfn=log.45006595._053903.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:01:05] 2025-06-04 12:00:38,948 | INFO     | stage-out finished correctly
[2025-06-04 08:01:05] 2025-06-04 12:00:39,257 | INFO     | monitor loop #282: job 0:6678364403 is in state 'finished'
[2025-06-04 08:01:05] 2025-06-04 12:00:39,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:05] 2025-06-04 12:00:39,628 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:01:05] 2025-06-04 12:00:41,760 | INFO     | monitor loop #283: job 0:6678364403 is in state 'finished'
[2025-06-04 08:01:05] 2025-06-04 12:00:41,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:05] 2025-06-04 12:00:42,403 | INFO     | job 6678364403 has state=finished
[2025-06-04 08:01:05] 2025-06-04 12:00:42,403 | INFO     | preparing for final server update for job 6678364403 in state='finished'
[2025-06-04 08:01:05] 2025-06-04 12:00:42,404 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:01:05] 2025-06-04 12:00:42,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:01:05] 2025-06-04 12:00:42,404 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:01:05] 2025-06-04 12:00:42,404 | INFO     | job 6678364403 has finished - writing final server update
[2025-06-04 08:01:05] 2025-06-04 12:00:42,404 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:01:05] 2025-06-04 12:00:42,420 | INFO     | executing command: lscpu
[2025-06-04 08:01:05] 2025-06-04 12:00:42,501 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:01:05] 2025-06-04 12:00:44,265 | INFO     | monitor loop #284: job 0:6678364403 is in state 'finished'
[2025-06-04 08:01:05] 2025-06-04 12:00:44,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:05] 2025-06-04 12:00:45,927 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:01:05] 2025-06-04 12:00:45,928 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678364403/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:01:05] 2025-06-04 12:00:45,928 | INFO     | extracted standard info from prmon json
[2025-06-04 08:01:05] 2025-06-04 12:00:45,929 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:01:05] 2025-06-04 12:00:45,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:01:05] 2025-06-04 12:00:45,929 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:01:05] 2025-06-04 12:00:45,929 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:01:05] 2025-06-04 12:00:45,930 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | sum of deviations: 4806423935.0
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | mean x: 1749036633.0
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | mean y: 2151599.7818181817
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | -- intersect: -163001779833.47055
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | intersect: -163001779833.47055
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | chi2: 0.7717081363378963
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | -- intersect: -163001779833.47055
[2025-06-04 08:01:05] 2025-06-04 12:00:45,931 | INFO     | current memory leak: 93.20 B/s (using 55 data points, chi2=0.77)
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | ..............................
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . Timing measurements:
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . get job = 0 s
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . initial setup = 2 s
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . payload setup = 6 s
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . stage-in = 0 s
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . payload execution = 3758 s
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . stage-out = 0 s
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | . log creation = 0 s
[2025-06-04 08:01:05] 2025-06-04 12:00:45,932 | INFO     | ..............................
[2025-06-04 08:01:05] 2025-06-04 12:00:46,010 | INFO     | 
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | job summary report
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | --------------------------------------------------
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | PanDA job id: 6678364403
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | task id: 45006595
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | errors: (none)
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | pilot state: finished 
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | transexitcode: 0
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | exeerrorcode: 0
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | exeerrordiag: 
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | exitcode: 0
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | exitmsg: OK
[2025-06-04 08:01:05] 2025-06-04 12:00:46,011 | INFO     | cpuconsumptiontime: 25260 s
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | nevents: 400
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | neventsw: 0
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | pid: 1436215
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | pgrp: 1436215
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | corecount: 8
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | event service: False
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | sizes: {0: 2404356, 1: 2405212, 6: 2405418, 12: 2405446, 3768: 2431212, 3769: 2440153, 3770: 2440337, 3776: 2440507}
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | --------------------------------------------------
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | 
[2025-06-04 08:01:05] 2025-06-04 12:00:46,012 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:01:05] 2025-06-04 12:00:46,032 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,032 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,032 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,034 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:01:05] 2025-06-04 12:00:46,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,035 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:01:05] 2025-06-04 12:00:46,035 | INFO     | job 6678364403 has completed (purged errors)
[2025-06-04 08:01:05] 2025-06-04 12:00:46,035 | INFO     | overall cleanup function is called
[2025-06-04 08:01:05] 2025-06-04 12:00:47,040 | INFO     | --- collectZombieJob: --- 10, [1436215]
[2025-06-04 08:01:05] 2025-06-04 12:00:47,040 | INFO     | zombie collector waiting for pid 1436215
[2025-06-04 08:01:05] 2025-06-04 12:00:47,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:01:05] 2025-06-04 12:00:47,041 | INFO     | collected zombie processes
[2025-06-04 08:01:05] 2025-06-04 12:00:47,041 | INFO     | will attempt to kill all subprocesses of pid=1436215
[2025-06-04 08:01:05] 2025-06-04 12:00:47,340 | INFO     | process IDs to be killed: [1436215] (in reverse order)
[2025-06-04 08:01:05] 2025-06-04 12:00:47,454 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:01:05] 2025-06-04 12:00:47,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:01:05] 2025-06-04 12:00:47,469 | INFO     | did not find any defunct processes belonging to 1436215
[2025-06-04 08:01:05] 2025-06-04 12:00:47,483 | INFO     | did not find any defunct processes belonging to 1436215
[2025-06-04 08:01:05] 2025-06-04 12:00:47,484 | INFO     | ready for new job
[2025-06-04 08:01:05] 2025-06-04 12:00:47,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:01:05] 2025-06-04 12:00:47,485 | INFO     | **************************************
[2025-06-04 08:01:05] 2025-06-04 12:00:47,485 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:01:05] 2025-06-04 12:00:47,485 | INFO     | **************************************
[2025-06-04 08:01:05] 2025-06-04 12:00:47,485 | INFO     | 
[2025-06-04 08:01:05] 2025-06-04 12:00:47,500 | INFO     | architecture information:
[2025-06-04 08:01:05] 2025-06-04 12:00:47,500 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:01:05] 2025-06-04 12:00:47,520 | INFO     | cat /etc/os-release:
[2025-06-04 08:01:05] NAME="CentOS Linux"
[2025-06-04 08:01:05] VERSION="7 (Core)"
[2025-06-04 08:01:05] ID="centos"
[2025-06-04 08:01:05] ID_LIKE="rhel fedora"
[2025-06-04 08:01:05] VERSION_ID="7"
[2025-06-04 08:01:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:01:05] ANSI_COLOR="0;31"
[2025-06-04 08:01:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:01:05] HOME_URL="https://www.centos.org/"
[2025-06-04 08:01:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:01:05] 
[2025-06-04 08:01:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:01:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:01:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:01:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:01:05] 
[2025-06-04 08:01:05] 2025-06-04 12:00:47,521 | INFO     | **************************************
[2025-06-04 08:01:05] 2025-06-04 12:00:48,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:01:05] 2025-06-04 12:00:48,047 | INFO     | sufficient remaining disk space (86039855104 B)
[2025-06-04 08:01:05] 2025-06-04 12:00:48,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:01:05] 2025-06-04 12:00:48,048 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:01:05] 2025-06-04 12:00:48,048 | INFO     | update_server=False
[2025-06-04 08:01:05] 2025-06-04 12:00:48,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:01:05] 2025-06-04 12:00:48,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:05] 2025-06-04 12:00:48,049 | INFO     | aborting loop
[2025-06-04 08:01:05] 2025-06-04 12:00:48,089 | INFO     | PID=1429718 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 08:01:05] 2025-06-04 12:00:48,090 | INFO     | .. there are 24 such processes running
[2025-06-04 08:01:05] 2025-06-04 12:00:48,090 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:01:05] 2025-06-04 12:00:48,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:01:05] 2025-06-04 12:00:48,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:01:05] 2025-06-04 12:00:48,438 | INFO     | all data control threads have been joined
[2025-06-04 08:01:05] 2025-06-04 12:00:48,737 | INFO     | all job control threads have been joined
[2025-06-04 08:01:05] 2025-06-04 12:00:49,054 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:49,054 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:49,440 | INFO     | all payload control threads have been joined
[2025-06-04 08:01:05] 2025-06-04 12:00:49,444 | INFO     | [data] control thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:49,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:01:05] 2025-06-04 12:00:49,640 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:49,711 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:49,743 | INFO     | [job] control thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:49,810 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:50,065 | INFO     | [job] validate thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:50,066 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:50,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:01:05] 2025-06-04 12:00:50,412 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:50,445 | INFO     | [payload] control thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:50,617 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:51,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:05] 2025-06-04 12:00:51,520 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:52,027 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:54,215 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:58,409 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:01:05] 2025-06-04 12:00:59,414 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:01:05] 2025-06-04 12:00:59,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876628612928)>', '<ExcThread(monitor, started 139875986687744)>']
[2025-06-04 08:01:05] 2025-06-04 12:01:00,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:01:05] 2025-06-04 12:01:00,140 | INFO     | [monitor] control thread has ended
[2025-06-04 08:01:05] 2025-06-04 12:01:05,004 | INFO     | all workflow threads have been joined
[2025-06-04 08:01:05] 2025-06-04 12:01:05,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:01:05] 2025-06-04 12:01:05,005 | INFO     | traces error code: 0
[2025-06-04 08:01:05] 2025-06-04 12:01:05,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:01:05] 2025-06-04 12:01:05,129 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:01:05] 2025-06-04 12:01:05,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:01:05] 2025-06-04 12:01:05,135 [wrapper] pilotpid: 1429718
[2025-06-04 08:01:05] 2025-06-04 12:01:05,137 [wrapper] Pilot exit status: 0
[2025-06-04 08:01:05] 2025-06-04 12:01:05,148 [wrapper] pandaids: 6678364403
[2025-06-04 08:01:05] 2025-06-04 12:01:05,229 [wrapper] cleanup supervisor_pilot 1588136 1429719
[2025-06-04 08:01:05] 2025-06-04 12:01:05,233 [wrapper] Test setup, not cleaning
[2025-06-04 08:01:05] 2025-06-04 12:01:05,236 [wrapper] apfmon messages muted
[2025-06-04 08:01:05] 2025-06-04 12:01:05,240 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:01:05] 2025-06-04 12:01:05,243 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:01:05]  *** Error codes and diagnostics ***
[2025-06-04 08:01:05]     "exeErrorCode": 0,
[2025-06-04 08:01:05]     "exeErrorDiag": "",
[2025-06-04 08:01:05]     "pilotErrorCode": 0,
[2025-06-04 08:01:05]     "pilotErrorDiag": "",
[2025-06-04 08:01:05]  *** Listing of results directory ***
[2025-06-04 08:01:05] total 387552
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:18 queuedata.json
[2025-06-04 08:01:05] -rwx------. 1 boincer umatlas     37140 Jun  4 02:20 runpilot2-wrapper.sh
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:01:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:57 run_atlas
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:57 job.xml
[2025-06-04 08:01:05] -rw-r--r--. 2 boincer umatlas 213800995 Jun  4 06:57 EVNT.45006593._002157.pool.root.1
[2025-06-04 08:01:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:57 start_atlas.sh
[2025-06-04 08:01:05] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:57 shared
[2025-06-04 08:01:05] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 06:57 input.tar.gz
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:57 boinc_lockfile
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:57 pandaJob.out
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas    986812 Jun  4 06:57 agis_schedconf.cvmfs.json
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:01:05] drwx------. 4 boincer umatlas      4096 Jun  4 06:57 pilot3
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 07:58 init_data.xml
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:00 boinc_task_state.xml
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas 177839046 Jun  4 08:00 HITS.45006595._053903.pool.root.1
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas      1022 Jun  4 08:00 memory_monitor_summary.json
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas    305370 Jun  4 08:00 log.45006595._053903.job.log.tgz.1
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas      7681 Jun  4 08:00 heartbeat.json
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas        95 Jun  4 08:00 pilot_heartbeat.json
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:01 boinc_mmap_file
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas      4821 Jun  4 08:01 pilotlog.txt
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas    383539 Jun  4 08:01 log.45006595._053903.job.log.1
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas       357 Jun  4 08:01 output.list
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:01 wrapper_checkpoint.txt
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:01 runtime_log
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas    706560 Jun  4 08:01 result.tar.gz
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 08:01 runtime_log.err
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas       651 Jun  4 08:01 Ix9NDmpfwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGSnKDmKa5PAn.diag
[2025-06-04 08:01:05] -rw-r--r--. 1 boincer umatlas     21475 Jun  4 08:01 stderr.txt
[2025-06-04 08:01:05] HITS file was successfully produced:
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas 177839046 Jun  4 08:00 shared/HITS.pool.root.1
[2025-06-04 08:01:05]  *** Contents of shared directory: ***
[2025-06-04 08:01:05] total 383680
[2025-06-04 08:01:05] -rw-r--r--. 2 boincer umatlas 213800995 Jun  4 06:57 ATLAS.root_0
[2025-06-04 08:01:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:57 start_atlas.sh
[2025-06-04 08:01:05] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 06:57 input.tar.gz
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas 177839046 Jun  4 08:00 HITS.pool.root.1
[2025-06-04 08:01:05] -rw-------. 1 boincer umatlas    706560 Jun  4 08:01 result.tar.gz
08:01:07 (1426018): run_atlas exited; CPU time 25296.095731
08:01:07 (1426018): called boinc_finish(0)

</stderr_txt>
]]>

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