Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:14:31 (2185740): wrapper (7.7.26015): starting
00:14:31 (2185740): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 00:14:31] Arguments: --nthreads 3
[2025-06-05 00:14:31] Threads: 3
[2025-06-05 00:14:31] Checking for CVMFS
[2025-06-05 00:14:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:14:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:14:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:14:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:14:31] 2.9.2.0 1307714 3031 68144 146797 2 55 29467032 36864001 0 130560 0 2357459 99.991 756020 38098 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 00:14:31] CVMFS is ok
[2025-06-05 00:14:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:14:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:14:31] Further information can be found at the LHC@home message board.
[2025-06-05 00:14:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:14:31] Checking for apptainer binary...
[2025-06-05 00:14:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:14:31] Running /usr/bin/apptainer --version
[2025-06-05 00:14:31] apptainer version 1.3.6-6.1
[2025-06-05 00:14:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:14:32] thA325a
[2025-06-05 00:14:32] apptainer works
[2025-06-05 00:14:32] Set ATHENA_PROC_NUMBER=3
[2025-06-05 00:14:32] Set ATHENA_CORE_NUMBER=3
[2025-06-05 00:14:32] Starting ATLAS job with PandaID=6678364650
[2025-06-05 00:14:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:36:33]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:36:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:36:33]  replicas=None
[2025-06-05 01:36:33]  scope=mc23_13p6TeV
[2025-06-05 01:36:33]  status=None
[2025-06-05 01:36:33]  status_code=0
[2025-06-05 01:36:33]  storage_token=
[2025-06-05 01:36:33]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678364650/log.45006595._054134.job.log.tgz.1
[2025-06-05 01:36:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/f4/log.45006595._054134.job.log.tgz.1
[2025-06-05 01:36:33]  workdir=None
[2025-06-05 01:36:33] ]
[2025-06-05 01:36:33] 2025-06-04 23:35:59,468 | INFO     | transferring file log.45006595._054134.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678364650/log.45006595._054134.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 01:36:33] 2025-06-04 23:35:59,468 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678364650/log.45006595._054134.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0541
[2025-06-05 01:36:33] 2025-06-04 23:35:59,481 | INFO     | adding to output.list: log.45006595._054134.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/f4/log.45006595._054134.job.log.tg
[2025-06-05 01:36:33] 2025-06-04 23:35:59,481 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:36:33] 2025-06-04 23:35:59,481 | INFO     | summary of transferred files:
[2025-06-05 01:36:33] 2025-06-04 23:35:59,481 | INFO     |  -- lfn=log.45006595._054134.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:36:33] 2025-06-04 23:35:59,481 | INFO     | stage-out finished correctly
[2025-06-05 01:36:33] 2025-06-04 23:36:01,310 | INFO     | monitor loop #377: job 0:6678364650 is in state 'finished'
[2025-06-05 01:36:33] 2025-06-04 23:36:01,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:36:33] 2025-06-04 23:36:01,607 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:36:33] 2025-06-04 23:36:03,814 | INFO     | monitor loop #378: job 0:6678364650 is in state 'finished'
[2025-06-05 01:36:33] 2025-06-04 23:36:03,814 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:36:33] 2025-06-04 23:36:03,929 | INFO     | job 6678364650 has state=finished
[2025-06-05 01:36:33] 2025-06-04 23:36:03,929 | INFO     | preparing for final server update for job 6678364650 in state='finished'
[2025-06-05 01:36:33] 2025-06-04 23:36:04,508 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-05 01:36:33] 2025-06-04 23:36:04,509 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:36:33] 2025-06-04 23:36:04,509 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:36:33] 2025-06-04 23:36:04,510 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:36:33] 2025-06-04 23:36:04,510 | INFO     | job 6678364650 has finished - writing final server update
[2025-06-05 01:36:33] 2025-06-04 23:36:04,510 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:36:33] 2025-06-04 23:36:04,511 | INFO     | executing command: lscpu
[2025-06-05 01:36:33] 2025-06-04 23:36:04,524 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:36:33] 2025-06-04 23:36:06,317 | INFO     | monitor loop #379: job 0:6678364650 is in state 'finished'
[2025-06-05 01:36:33] 2025-06-04 23:36:06,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:36:33] 2025-06-04 23:36:08,821 | INFO     | monitor loop #380: job 0:6678364650 is in state 'finished'
[2025-06-05 01:36:33] 2025-06-04 23:36:08,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:36:33] 2025-06-04 23:36:09,283 | INFO     | PID=2189382 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:36:33] 2025-06-04 23:36:11,325 | INFO     | monitor loop #381: job 0:6678364650 is in state 'finished'
[2025-06-05 01:36:33] 2025-06-04 23:36:11,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:36:33] 2025-06-04 23:36:12,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:36:33] 2025-06-04 23:36:12,396 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678364650/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:36:33] 2025-06-04 23:36:12,396 | INFO     | extracted standard info from prmon json
[2025-06-05 01:36:33] 2025-06-04 23:36:12,396 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:36:33] 2025-06-04 23:36:12,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:36:33] 2025-06-04 23:36:12,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:36:33] 2025-06-04 23:36:12,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | sum of square deviations: 120605052.0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | sum of deviations: -7965852323.0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | mean x: 1749077812.0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | mean y: 2517663.3561643837
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | -- intersect: 115527492121.5402
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | intersect: 115527492121.5402
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | chi2: 0.062041705987442464
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | -- intersect: 115527492121.5402
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | current memory leak: -66.05 B/s (using 73 data points, chi2=0.06)
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | ..............................
[2025-06-05 01:36:33] 2025-06-04 23:36:12,397 | INFO     | . Timing measurements:
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | . get job = 0 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | . initial setup = 1 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | . payload setup = 7 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | . stage-in = 0 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | . payload execution = 4847 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | . stage-out = 0 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | . log creation = 0 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,398 | INFO     | ..............................
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | 
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | job summary report
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | --------------------------------------------------
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | PanDA job id: 6678364650
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | task id: 45006595
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | errors: (none)
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | pilot state: finished 
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | transexitcode: 0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | exeerrorcode: 0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | exeerrordiag: 
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | exitcode: 0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,459 | INFO     | exitmsg: OK
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | cpuconsumptiontime: 13981 s
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | nevents: 400
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | neventsw: 0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | pid: 2195871
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | pgrp: 2195871
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | corecount: 3
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | event service: False
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | sizes: {0: 2397339, 5: 2397545, 10: 2397601, 4858: 2423794, 4859: 2432769, 4861: 2432825, 4872: 2433123}
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | --------------------------------------------------
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | 
[2025-06-05 01:36:33] 2025-06-04 23:36:12,460 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 01:36:33] 2025-06-04 23:36:12,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:36:33] 2025-06-04 23:36:12,475 | INFO     | job 6678364650 has completed (purged errors)
[2025-06-05 01:36:33] 2025-06-04 23:36:12,476 | INFO     | overall cleanup function is called
[2025-06-05 01:36:33] 2025-06-04 23:36:13,482 | INFO     | --- collectZombieJob: --- 10, [2195871]
[2025-06-05 01:36:33] 2025-06-04 23:36:13,483 | INFO     | zombie collector waiting for pid 2195871
[2025-06-05 01:36:33] 2025-06-04 23:36:13,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:36:33] 2025-06-04 23:36:13,483 | INFO     | collected zombie processes
[2025-06-05 01:36:33] 2025-06-04 23:36:13,483 | INFO     | will attempt to kill all subprocesses of pid=2195871
[2025-06-05 01:36:33] 2025-06-04 23:36:13,523 | INFO     | process IDs to be killed: [2195871] (in reverse order)
[2025-06-05 01:36:33] 2025-06-04 23:36:13,548 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:36:33] 2025-06-04 23:36:13,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:36:33] 2025-06-04 23:36:13,549 | INFO     | did not find any defunct processes belonging to 2195871
[2025-06-05 01:36:33] 2025-06-04 23:36:13,550 | INFO     | did not find any defunct processes belonging to 2195871
[2025-06-05 01:36:33] 2025-06-04 23:36:13,550 | INFO     | ready for new job
[2025-06-05 01:36:33] 2025-06-04 23:36:13,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:36:33] 2025-06-04 23:36:13,550 | INFO     | **************************************
[2025-06-05 01:36:33] 2025-06-04 23:36:13,550 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:36:33] 2025-06-04 23:36:13,550 | INFO     | **************************************
[2025-06-05 01:36:33] 2025-06-04 23:36:13,550 | INFO     | 
[2025-06-05 01:36:33] 2025-06-04 23:36:13,551 | INFO     | architecture information:
[2025-06-05 01:36:33] 2025-06-04 23:36:13,551 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:36:33] 2025-06-04 23:36:13,561 | INFO     | cat /etc/os-release:
[2025-06-05 01:36:33] NAME="CentOS Linux"
[2025-06-05 01:36:33] VERSION="7 (Core)"
[2025-06-05 01:36:33] ID="centos"
[2025-06-05 01:36:33] ID_LIKE="rhel fedora"
[2025-06-05 01:36:33] VERSION_ID="7"
[2025-06-05 01:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:36:33] ANSI_COLOR="0;31"
[2025-06-05 01:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:36:33] HOME_URL="https://www.centos.org/"
[2025-06-05 01:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:36:33] 
[2025-06-05 01:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:36:33] 
[2025-06-05 01:36:33] 2025-06-04 23:36:13,562 | INFO     | **************************************
[2025-06-05 01:36:33] 2025-06-04 23:36:14,063 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 01:36:33] 2025-06-04 23:36:14,077 | INFO     | sufficient remaining disk space (828914008064 B)
[2025-06-05 01:36:33] 2025-06-04 23:36:14,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:36:33] 2025-06-04 23:36:14,077 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:36:33] 2025-06-04 23:36:14,077 | INFO     | update_server=False
[2025-06-05 01:36:33] 2025-06-04 23:36:14,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:36:33] 2025-06-04 23:36:14,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:36:33] 2025-06-04 23:36:14,078 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:36:33] 2025-06-04 23:36:14,078 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:36:33] 2025-06-04 23:36:14,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:36:33] 2025-06-04 23:36:14,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:36:33] 2025-06-04 23:36:14,306 | INFO     | all job control threads have been joined
[2025-06-05 01:36:33] 2025-06-04 23:36:14,477 | INFO     | all payload control threads have been joined
[2025-06-05 01:36:33] 2025-06-04 23:36:14,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:36:33] 2025-06-04 23:36:14,835 | INFO     | aborting loop
[2025-06-05 01:36:33] 2025-06-04 23:36:15,027 | INFO     | all data control threads have been joined
[2025-06-05 01:36:33] 2025-06-04 23:36:15,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:36:33] 2025-06-04 23:36:15,083 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,084 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,281 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,311 | INFO     | [job] control thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,483 | INFO     | [payload] control thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,506 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,781 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,841 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:15,971 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:16,033 | INFO     | [data] control thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:16,388 | INFO     | [job] validate thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:16,392 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:16,553 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:16,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:36:33] 2025-06-04 23:36:17,043 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:20,660 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:24,454 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:36:33] 2025-06-04 23:36:25,460 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:36:33] 2025-06-04 23:36:27,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688644798272)>', '<ExcThread(monitor, started 140688020727552)>']
[2025-06-05 01:36:33] 2025-06-04 23:36:28,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:36:33] 2025-06-04 23:36:28,155 | INFO     | [monitor] control thread has ended
[2025-06-05 01:36:33] 2025-06-04 23:36:32,353 | INFO     | all workflow threads have been joined
[2025-06-05 01:36:33] 2025-06-04 23:36:32,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:36:33] 2025-06-04 23:36:32,355 | INFO     | traces error code: 0
[2025-06-05 01:36:33] 2025-06-04 23:36:32,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:36:33] 2025-06-04 23:36:32,406 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:36:33] 2025-06-04 23:36:32,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:36:33] 2025-06-04 23:36:32,412 [wrapper] pilotpid: 2189382
[2025-06-05 01:36:33] 2025-06-04 23:36:32,414 [wrapper] Pilot exit status: 0
[2025-06-05 01:36:33] 2025-06-04 23:36:32,422 [wrapper] pandaids: 6678364650
[2025-06-05 01:36:33] 2025-06-04 23:36:32,438 [wrapper] cleanup supervisor_pilot 2207873 2189383
[2025-06-05 01:36:33] 2025-06-04 23:36:32,441 [wrapper] Test setup, not cleaning
[2025-06-05 01:36:33] 2025-06-04 23:36:32,445 [wrapper] apfmon messages muted
[2025-06-05 01:36:33] 2025-06-04 23:36:32,447 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:36:33] 2025-06-04 23:36:32,449 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:36:33]  *** Error codes and diagnostics ***
[2025-06-05 01:36:33]     "exeErrorCode": 0,
[2025-06-05 01:36:33]     "exeErrorDiag": "",
[2025-06-05 01:36:33]     "pilotErrorCode": 0,
[2025-06-05 01:36:33]     "pilotErrorDiag": "",
[2025-06-05 01:36:33]  *** Listing of results directory ***
[2025-06-05 01:36:33] total 388184
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:27 queuedata.json
[2025-06-05 01:36:33] -rwx------ 1 boinc boinc     37140 Jun  4 08:27 runpilot2-wrapper.sh
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:36:33] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:14 run_atlas
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:14 job.xml
[2025-06-05 01:36:33] -rw-r--r-- 2 boinc boinc 216673213 Jun  5 00:14 EVNT.45006593._002167.pool.root.1
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc      6680 Jun  5 00:14 init_data.xml
[2025-06-05 01:36:33] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:14 shared
[2025-06-05 01:36:33] -rw-r--r-- 2 boinc boinc    508881 Jun  5 00:14 input.tar.gz
[2025-06-05 01:36:33] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:14 start_atlas.sh
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:14 boinc_lockfile
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc      2522 Jun  5 00:14 pandaJob.out
[2025-06-05 01:36:33] -rw------- 1 boinc boinc    987032 Jun  5 00:14 agis_schedconf.cvmfs.json
[2025-06-05 01:36:33] -rw------- 1 boinc boinc   1598969 Jun  5 00:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:36:33] drwx------ 4 boinc boinc      4096 Jun  5 00:14 pilot3
[2025-06-05 01:36:33] -rw------- 1 boinc boinc 175615589 Jun  5 01:35 HITS.45006595._054134.pool.root.1
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:35 boinc_task_state.xml
[2025-06-05 01:36:33] -rw------- 1 boinc boinc      1012 Jun  5 01:35 memory_monitor_summary.json
[2025-06-05 01:36:33] -rw------- 1 boinc boinc    213458 Jun  5 01:35 log.45006595._054134.job.log.tgz.1
[2025-06-05 01:36:33] -rw------- 1 boinc boinc        95 Jun  5 01:36 pilot_heartbeat.json
[2025-06-05 01:36:33] -rw------- 1 boinc boinc      7646 Jun  5 01:36 heartbeat.json
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:36 boinc_mmap_file
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:36 wrapper_checkpoint.txt
[2025-06-05 01:36:33] -rw------- 1 boinc boinc      4552 Jun  5 01:36 pilotlog.txt
[2025-06-05 01:36:33] -rw------- 1 boinc boinc    476641 Jun  5 01:36 log.45006595._054134.job.log.1
[2025-06-05 01:36:33] -rw------- 1 boinc boinc       357 Jun  5 01:36 output.list
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:36 runtime_log
[2025-06-05 01:36:33] -rw------- 1 boinc boinc    706560 Jun  5 01:36 result.tar.gz
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc      8738 Jun  5 01:36 runtime_log.err
[2025-06-05 01:36:33] -rw------- 1 boinc boinc       659 Jun  5 01:36 cFGMDm1lwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwTnKDmShhSSm.diag
[2025-06-05 01:36:33] -rw-r--r-- 1 boinc boinc     21916 Jun  5 01:36 stderr.txt
[2025-06-05 01:36:33] HITS file was successfully produced:
[2025-06-05 01:36:33] -rw------- 1 boinc boinc 175615589 Jun  5 01:35 shared/HITS.pool.root.1
[2025-06-05 01:36:33]  *** Contents of shared directory: ***
[2025-06-05 01:36:33] total 384312
[2025-06-05 01:36:33] -rw-r--r-- 2 boinc boinc 216673213 Jun  5 00:14 ATLAS.root_0
[2025-06-05 01:36:33] -rw-r--r-- 2 boinc boinc    508881 Jun  5 00:14 input.tar.gz
[2025-06-05 01:36:33] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:14 start_atlas.sh
[2025-06-05 01:36:33] -rw------- 1 boinc boinc 175615589 Jun  5 01:35 HITS.pool.root.1
[2025-06-05 01:36:33] -rw------- 1 boinc boinc    706560 Jun  5 01:36 result.tar.gz
01:36:34 (2185740): run_atlas exited; CPU time 14004.458675
01:36:34 (2185740): called boinc_finish(0)

</stderr_txt>
]]>

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