Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:40:05 (3944146): wrapper (7.7.26015): starting
07:40:05 (3944146): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 07:40:05] Arguments: --nthreads 12
[2025-06-04 07:40:05] Threads: 12
[2025-06-04 07:40:05] Checking for CVMFS
[2025-06-04 07:40:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:40:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:40:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:40:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:40:05] 2.12.6.0 5109 31455 439700 146779 3 66 18925089 32935937 4952 16776704 0 124320332 99.669 110755341 32500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:40:05] CVMFS is ok
[2025-06-04 07:40:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:40:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:40:05] Further information can be found at the LHC@home message board.
[2025-06-04 07:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:40:05] Checking for apptainer binary...
[2025-06-04 07:40:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:40:05] Running /usr/bin/apptainer --version
[2025-06-04 07:40:05] apptainer version 1.4.1-1.el9
[2025-06-04 07:40:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:40:05] c6-2-29-2.aglt2.org
[2025-06-04 07:40:05] apptainer works
[2025-06-04 07:40:05] Set ATHENA_PROC_NUMBER=12
[2025-06-04 07:40:05] Set ATHENA_CORE_NUMBER=12
[2025-06-04 07:40:05] Starting ATLAS job with PandaID=6678363879
[2025-06-04 07:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:19:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:19:49]  is_altstaged=None
[2025-06-04 08:19:49]  is_tar=False
[2025-06-04 08:19:49]  lfn=log.45006595._053754.job.log.tgz.1
[2025-06-04 08:19:49]  mtime=0
[2025-06-04 08:19:49]  protocol_id=None
[2025-06-04 08:19:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:19:49]  replicas=None
[2025-06-04 08:19:49]  scope=mc23_13p6TeV
[2025-06-04 08:19:49]  status=None
[2025-06-04 08:19:49]  status_code=0
[2025-06-04 08:19:49]  storage_token=
[2025-06-04 08:19:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678363879/log.45006595._053754.job.log.tgz.1
[2025-06-04 08:19:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/5c/log.45006595._053754.job.log.tgz.1
[2025-06-04 08:19:49]  workdir=None
[2025-06-04 08:19:49] ]
[2025-06-04 08:19:49] 2025-06-04 12:19:31,858 | INFO     | transferring file log.45006595._053754.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678363879/log.45006595._053754.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:19:49] 2025-06-04 12:19:31,858 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678363879/log.45006595._053754.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053754.job
[2025-06-04 08:19:49] 2025-06-04 12:19:31,871 | INFO     | adding to output.list: log.45006595._053754.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/5c/log.45006595._053754.job.log.tg
[2025-06-04 08:19:49] 2025-06-04 12:19:31,872 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:19:49] 2025-06-04 12:19:31,872 | INFO     | summary of transferred files:
[2025-06-04 08:19:49] 2025-06-04 12:19:31,872 | INFO     |  -- lfn=log.45006595._053754.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:19:49] 2025-06-04 12:19:31,872 | INFO     | stage-out finished correctly
[2025-06-04 08:19:49] 2025-06-04 12:19:33,898 | INFO     | monitor loop #182: job 0:6678363879 is in state 'finished'
[2025-06-04 08:19:49] 2025-06-04 12:19:33,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:19:49] 2025-06-04 12:19:34,370 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:19:49] 2025-06-04 12:19:34,414 | INFO     | job 6678363879 has state=finished
[2025-06-04 08:19:49] 2025-06-04 12:19:34,415 | INFO     | preparing for final server update for job 6678363879 in state='finished'
[2025-06-04 08:19:49] 2025-06-04 12:19:34,415 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:19:49] 2025-06-04 12:19:34,415 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:19:49] 2025-06-04 12:19:34,415 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:19:49] 2025-06-04 12:19:34,416 | INFO     | job 6678363879 has finished - writing final server update
[2025-06-04 08:19:49] 2025-06-04 12:19:34,416 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:19:49] 2025-06-04 12:19:34,431 | INFO     | executing command: lscpu
[2025-06-04 08:19:49] 2025-06-04 12:19:34,481 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:19:49] 2025-06-04 12:19:36,401 | INFO     | monitor loop #183: job 0:6678363879 is in state 'finished'
[2025-06-04 08:19:49] 2025-06-04 12:19:36,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:19:49] 2025-06-04 12:19:36,968 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:19:49] 2025-06-04 12:19:36,968 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678363879/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:19:49] 2025-06-04 12:19:36,969 | INFO     | extracted standard info from prmon json
[2025-06-04 08:19:49] 2025-06-04 12:19:36,969 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:19:49] 2025-06-04 12:19:36,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:19:49] 2025-06-04 12:19:36,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:19:49] 2025-06-04 12:19:36,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:19:49] 2025-06-04 12:19:36,971 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:19:49] 2025-06-04 12:19:36,971 | INFO     | sum of square deviations: 10150888.0
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | sum of deviations: 4495672062.0
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | mean x: 1749038484.5
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | mean y: 2680414.625
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | -- intersect: -774619544767.0015
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | intersect: -774619544767.0015
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | chi2: 0.6088860589592076
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | -- intersect: -774619544767.0015
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | current memory leak: 442.88 B/s (using 32 data points, chi2=0.61)
[2025-06-04 08:19:49] 2025-06-04 12:19:36,972 | INFO     | ..............................
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . Timing measurements:
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . get job = 0 s
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . initial setup = 2 s
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . payload setup = 4 s
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . stage-in = 0 s
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . payload execution = 2336 s
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . stage-out = 0 s
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | . log creation = 0 s
[2025-06-04 08:19:49] 2025-06-04 12:19:36,973 | INFO     | ..............................
[2025-06-04 08:19:49] 2025-06-04 12:19:37,055 | INFO     | 
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | job summary report
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | --------------------------------------------------
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | PanDA job id: 6678363879
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | task id: 45006595
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | errors: (none)
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | pilot state: finished 
[2025-06-04 08:19:49] 2025-06-04 12:19:37,056 | INFO     | transexitcode: 0
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | exeerrorcode: 0
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | exeerrordiag: 
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | exitcode: 0
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | exitmsg: OK
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | cpuconsumptiontime: 20925 s
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | nevents: 400
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | neventsw: 0
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | pid: 3954900
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | pgrp: 3954900
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | corecount: 12
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | event service: False
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 2344: 2422645, 2345: 2422644, 2346: 2431641, 2348: 2431825, 2351: 2431995}
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | --------------------------------------------------
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | 
[2025-06-04 08:19:49] 2025-06-04 12:19:37,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:19:49] 2025-06-04 12:19:37,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | job 6678363879 has completed (purged errors)
[2025-06-04 08:19:49] 2025-06-04 12:19:37,072 | INFO     | overall cleanup function is called
[2025-06-04 08:19:49] 2025-06-04 12:19:38,050 | INFO     | PID=3947813 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 08:19:49] 2025-06-04 12:19:38,051 | INFO     | .. there are 8 such processes running
[2025-06-04 08:19:49] 2025-06-04 12:19:38,080 | INFO     | --- collectZombieJob: --- 10, [3954900]
[2025-06-04 08:19:49] 2025-06-04 12:19:38,080 | INFO     | zombie collector waiting for pid 3954900
[2025-06-04 08:19:49] 2025-06-04 12:19:38,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:19:49] 2025-06-04 12:19:38,080 | INFO     | collected zombie processes
[2025-06-04 08:19:49] 2025-06-04 12:19:38,080 | INFO     | will attempt to kill all subprocesses of pid=3954900
[2025-06-04 08:19:49] 2025-06-04 12:19:38,242 | INFO     | process IDs to be killed: [3954900] (in reverse order)
[2025-06-04 08:19:49] 2025-06-04 12:19:38,293 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:19:49] 2025-06-04 12:19:38,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:19:49] 2025-06-04 12:19:38,299 | INFO     | did not find any defunct processes belonging to 3954900
[2025-06-04 08:19:49] 2025-06-04 12:19:38,305 | INFO     | did not find any defunct processes belonging to 3954900
[2025-06-04 08:19:49] 2025-06-04 12:19:38,305 | INFO     | ready for new job
[2025-06-04 08:19:49] 2025-06-04 12:19:38,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:19:49] 2025-06-04 12:19:38,306 | INFO     | **************************************
[2025-06-04 08:19:49] 2025-06-04 12:19:38,306 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:19:49] 2025-06-04 12:19:38,306 | INFO     | **************************************
[2025-06-04 08:19:49] 2025-06-04 12:19:38,306 | INFO     | 
[2025-06-04 08:19:49] 2025-06-04 12:19:38,320 | INFO     | architecture information:
[2025-06-04 08:19:49] 2025-06-04 12:19:38,320 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:19:49] 2025-06-04 12:19:38,330 | INFO     | cat /etc/os-release:
[2025-06-04 08:19:49] NAME="CentOS Linux"
[2025-06-04 08:19:49] VERSION="7 (Core)"
[2025-06-04 08:19:49] ID="centos"
[2025-06-04 08:19:49] ID_LIKE="rhel fedora"
[2025-06-04 08:19:49] VERSION_ID="7"
[2025-06-04 08:19:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:19:49] ANSI_COLOR="0;31"
[2025-06-04 08:19:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:19:49] HOME_URL="https://www.centos.org/"
[2025-06-04 08:19:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:19:49] 
[2025-06-04 08:19:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:19:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:19:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:19:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:19:49] 
[2025-06-04 08:19:49] 2025-06-04 12:19:38,330 | INFO     | **************************************
[2025-06-04 08:19:49] 2025-06-04 12:19:38,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:19:49] 2025-06-04 12:19:38,844 | INFO     | sufficient remaining disk space (76258738176 B)
[2025-06-04 08:19:49] 2025-06-04 12:19:38,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:19:49] 2025-06-04 12:19:38,844 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:19:49] 2025-06-04 12:19:38,844 | INFO     | update_server=False
[2025-06-04 08:19:49] 2025-06-04 12:19:38,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:19:49] 2025-06-04 12:19:38,845 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:19:49] 2025-06-04 12:19:38,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:19:49] 2025-06-04 12:19:38,845 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:19:49] 2025-06-04 12:19:38,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:19:49] 2025-06-04 12:19:38,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:19:49] 2025-06-04 12:19:38,905 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:19:49] 2025-06-04 12:19:38,905 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:19:49] 2025-06-04 12:19:38,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:19:49] 2025-06-04 12:19:38,905 | INFO     | will abort loop
[2025-06-04 08:19:49] 2025-06-04 12:19:39,124 | INFO     | all data control threads have been joined
[2025-06-04 08:19:49] 2025-06-04 12:19:39,510 | INFO     | all payload control threads have been joined
[2025-06-04 08:19:49] 2025-06-04 12:19:39,830 | INFO     | all job control threads have been joined
[2025-06-04 08:19:49] 2025-06-04 12:19:39,850 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:39,851 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:39,911 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:39,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:19:49] 2025-06-04 12:19:40,045 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,130 | INFO     | [data] control thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,304 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:19:49] 2025-06-04 12:19:40,452 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,460 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,515 | INFO     | [payload] control thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,529 | INFO     | [job] validate thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,761 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:40,836 | INFO     | [job] control thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:41,056 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:41,934 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:44,426 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:19:49] 2025-06-04 12:19:44,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706782390080)>', '<ExcThread(monitor, started 139706142545664)>']
[2025-06-04 08:19:49] 2025-06-04 12:19:44,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:19:49] 2025-06-04 12:19:44,877 | INFO     | [monitor] control thread has ended
[2025-06-04 08:19:49] 2025-06-04 12:19:49,732 | INFO     | all workflow threads have been joined
[2025-06-04 08:19:49] 2025-06-04 12:19:49,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:19:49] 2025-06-04 12:19:49,733 | INFO     | traces error code: 0
[2025-06-04 08:19:49] 2025-06-04 12:19:49,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:19:49] 2025-06-04 12:19:49,872 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:19:49] 2025-06-04 12:19:49,874 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:19:49] 2025-06-04 12:19:49,876 [wrapper] pilotpid: 3947813
[2025-06-04 08:19:49] 2025-06-04 12:19:49,878 [wrapper] Pilot exit status: 0
[2025-06-04 08:19:49] 2025-06-04 12:19:49,885 [wrapper] pandaids: 6678363879
[2025-06-04 08:19:49] 2025-06-04 12:19:49,919 [wrapper] cleanup supervisor_pilot 4028113 3947814
[2025-06-04 08:19:49] 2025-06-04 12:19:49,921 [wrapper] Test setup, not cleaning
[2025-06-04 08:19:49] 2025-06-04 12:19:49,922 [wrapper] apfmon messages muted
[2025-06-04 08:19:49] 2025-06-04 12:19:49,925 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:19:49] 2025-06-04 12:19:49,926 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:19:49]  *** Error codes and diagnostics ***
[2025-06-04 08:19:49]     "exeErrorCode": 0,
[2025-06-04 08:19:49]     "exeErrorDiag": "",
[2025-06-04 08:19:49]     "pilotErrorCode": 0,
[2025-06-04 08:19:49]     "pilotErrorDiag": "",
[2025-06-04 08:19:49]  *** Listing of results directory ***
[2025-06-04 08:19:49] total 394768
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:57 queuedata.json
[2025-06-04 08:19:49] -rwx------. 1 boincer umatlas     37140 Jun  4 01:57 runpilot2-wrapper.sh
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:19:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:40 run_atlas
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:40 job.xml
[2025-06-04 08:19:49] -rw-r--r--. 2 boincer umatlas 216561468 Jun  4 07:40 EVNT.45006593._002151.pool.root.1
[2025-06-04 08:19:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:40 start_atlas.sh
[2025-06-04 08:19:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:40 shared
[2025-06-04 08:19:49] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 07:40 input.tar.gz
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:40 boinc_lockfile
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:40 pandaJob.out
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas    986812 Jun  4 07:40 agis_schedconf.cvmfs.json
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:19:49] drwx------. 4 boincer umatlas      4096 Jun  4 07:40 pilot3
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 08:10 init_data.xml
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas        95 Jun  4 08:18 pilot_heartbeat.json
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:19 boinc_task_state.xml
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas 182627527 Jun  4 08:19 HITS.45006595._053754.pool.root.1
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas      1034 Jun  4 08:19 memory_monitor_summary.json
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas    350007 Jun  4 08:19 log.45006595._053754.job.log.tgz.1
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:19 boinc_mmap_file
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:19 wrapper_checkpoint.txt
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas      7716 Jun  4 08:19 heartbeat.json
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas      4662 Jun  4 08:19 pilotlog.txt
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas    261776 Jun  4 08:19 log.45006595._053754.job.log.1
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas       357 Jun  4 08:19 output.list
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:19 runtime_log
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas    634880 Jun  4 08:19 result.tar.gz
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 08:19 runtime_log.err
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas       650 Jun  4 08:19 AWFODmnIwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmApaKDmakQKQm.diag
[2025-06-04 08:19:49] -rw-r--r--. 1 boincer umatlas     21496 Jun  4 08:19 stderr.txt
[2025-06-04 08:19:49] HITS file was successfully produced:
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas 182627527 Jun  4 08:19 shared/HITS.pool.root.1
[2025-06-04 08:19:49]  *** Contents of shared directory: ***
[2025-06-04 08:19:49] total 390976
[2025-06-04 08:19:49] -rw-r--r--. 2 boincer umatlas 216561468 Jun  4 07:40 ATLAS.root_0
[2025-06-04 08:19:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:40 start_atlas.sh
[2025-06-04 08:19:49] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 07:40 input.tar.gz
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas 182627527 Jun  4 08:19 HITS.pool.root.1
[2025-06-04 08:19:49] -rw-------. 1 boincer umatlas    634880 Jun  4 08:19 result.tar.gz
08:19:51 (3944146): run_atlas exited; CPU time 20961.825379
08:19:51 (3944146): called boinc_finish(0)

</stderr_txt>
]]>

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