Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:45 (207876): wrapper (7.7.26015): starting
06:56:45 (207876): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 06:56:45] Arguments: --nthreads 9
[2025-06-04 06:56:45] Threads: 9
[2025-06-04 06:56:45] Checking for CVMFS
[2025-06-04 06:56:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:56:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:56:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:56:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:56:45] 2.11.2.0 22099 12276 260096 146777 0 203 12210916 18432000 4337 130560 0 51812995 98.941 97829767 37781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:56:45] CVMFS is ok
[2025-06-04 06:56:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:56:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:56:45] Further information can be found at the LHC@home message board.
[2025-06-04 06:56:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:56:45] Checking for apptainer binary...
[2025-06-04 06:56:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:56:45] Running /usr/bin/apptainer --version
[2025-06-04 06:56:45] apptainer version 1.3.2-1.el7
[2025-06-04 06:56:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:56:46] c-210-33-1.aglt2.org
[2025-06-04 06:56:46] apptainer works
[2025-06-04 06:56:46] Set ATHENA_PROC_NUMBER=9
[2025-06-04 06:56:46] Set ATHENA_CORE_NUMBER=9
[2025-06-04 06:56:46] Starting ATLAS job with PandaID=6679293647
[2025-06-04 06:56:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:40:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:40:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:40:08]  is_altstaged=None
[2025-06-04 07:40:08]  is_tar=False
[2025-06-04 07:40:08]  lfn=log.45006595._056115.job.log.tgz.1
[2025-06-04 07:40:08]  mtime=0
[2025-06-04 07:40:08]  protocol_id=None
[2025-06-04 07:40:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:40:08]  replicas=None
[2025-06-04 07:40:08]  scope=mc23_13p6TeV
[2025-06-04 07:40:08]  status=None
[2025-06-04 07:40:08]  status_code=0
[2025-06-04 07:40:08]  storage_token=
[2025-06-04 07:40:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679293647/log.45006595._056115.job.log.tgz.1
[2025-06-04 07:40:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/77/log.45006595._056115.job.log.tgz.1
[2025-06-04 07:40:08]  workdir=None
[2025-06-04 07:40:08] ]
[2025-06-04 07:40:08] 2025-06-04 11:39:49,773 | INFO     | transferring file log.45006595._056115.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679293647/log.45006595._056115.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:40:08] 2025-06-04 11:39:49,774 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679293647/log.45006595._056115.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056115.job
[2025-06-04 07:40:08] 2025-06-04 11:39:49,801 | INFO     | adding to output.list: log.45006595._056115.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/77/log.45006595._056115.job.log.tg
[2025-06-04 07:40:08] 2025-06-04 11:39:49,802 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:40:08] 2025-06-04 11:39:49,802 | INFO     | summary of transferred files:
[2025-06-04 07:40:08] 2025-06-04 11:39:49,802 | INFO     |  -- lfn=log.45006595._056115.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:40:08] 2025-06-04 11:39:49,802 | INFO     | stage-out finished correctly
[2025-06-04 07:40:08] 2025-06-04 11:39:51,380 | INFO     | monitor loop #198: job 0:6679293647 is in state 'finished'
[2025-06-04 07:40:08] 2025-06-04 11:39:51,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:40:08] 2025-06-04 11:39:52,550 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:40:08] 2025-06-04 11:39:52,640 | INFO     | job 6679293647 has state=finished
[2025-06-04 07:40:08] 2025-06-04 11:39:52,641 | INFO     | preparing for final server update for job 6679293647 in state='finished'
[2025-06-04 07:40:08] 2025-06-04 11:39:52,762 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 07:40:08] 2025-06-04 11:39:52,762 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:40:08] 2025-06-04 11:39:52,763 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:40:08] 2025-06-04 11:39:52,763 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:40:08] 2025-06-04 11:39:52,763 | INFO     | job 6679293647 has finished - writing final server update
[2025-06-04 07:40:08] 2025-06-04 11:39:52,763 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:40:08] 2025-06-04 11:39:52,766 | INFO     | executing command: lscpu
[2025-06-04 07:40:08] 2025-06-04 11:39:52,840 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:40:08] 2025-06-04 11:39:53,883 | INFO     | monitor loop #199: job 0:6679293647 is in state 'finished'
[2025-06-04 07:40:08] 2025-06-04 11:39:53,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:40:08] 2025-06-04 11:39:55,318 | INFO     | PID=211464 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 07:40:08] 2025-06-04 11:39:55,318 | INFO     | .. there are 10 such processes running
[2025-06-04 07:40:08] 2025-06-04 11:39:55,829 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:40:08] 2025-06-04 11:39:55,829 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679293647/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:40:08] 2025-06-04 11:39:55,830 | INFO     | extracted standard info from prmon json
[2025-06-04 07:40:08] 2025-06-04 11:39:55,830 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:40:08] 2025-06-04 11:39:55,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:40:08] 2025-06-04 11:39:55,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:40:08] 2025-06-04 11:39:55,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | sum of square deviations: 13283970.0
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | sum of deviations: -63811611.99999999
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | mean x: 1749035979.0
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | mean y: 2534224.8571428573
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | -- intersect: 8404300057.359635
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | intersect: 8404300057.359635
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | chi2: 0.002434795800229641
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | -- intersect: 8404300057.359635
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | current memory leak: -4.80 B/s (using 35 data points, chi2=0.00)
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | ..............................
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | . Timing measurements:
[2025-06-04 07:40:08] 2025-06-04 11:39:55,831 | INFO     | . get job = 0 s
[2025-06-04 07:40:08] 2025-06-04 11:39:55,832 | INFO     | . initial setup = 2 s
[2025-06-04 07:40:08] 2025-06-04 11:39:55,832 | INFO     | . payload setup = 5 s
[2025-06-04 07:40:08] 2025-06-04 11:39:55,832 | INFO     | . stage-in = 0 s
[2025-06-04 07:40:08] 2025-06-04 11:39:55,832 | INFO     | . payload execution = 2549 s
[2025-06-04 07:40:08] 2025-06-04 11:39:55,832 | INFO     | . stage-out = 0 s
[2025-06-04 07:40:08] 2025-06-04 11:39:55,832 | INFO     | . log creation = 0 s
[2025-06-04 07:40:08] 2025-06-04 11:39:55,832 | INFO     | ..............................
[2025-06-04 07:40:08] 2025-06-04 11:39:56,272 | INFO     | 
[2025-06-04 07:40:08] 2025-06-04 11:39:56,272 | INFO     | job summary report
[2025-06-04 07:40:08] 2025-06-04 11:39:56,272 | INFO     | --------------------------------------------------
[2025-06-04 07:40:08] 2025-06-04 11:39:56,272 | INFO     | PanDA job id: 6679293647
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | task id: 45006595
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | errors: (none)
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | pilot state: finished 
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | transexitcode: 0
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | exeerrorcode: 0
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | exeerrordiag: 
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | exitcode: 0
[2025-06-04 07:40:08] 2025-06-04 11:39:56,273 | INFO     | exitmsg: OK
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | cpuconsumptiontime: 20450 s
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | nevents: 400
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | neventsw: 0
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | pid: 218097
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | pgrp: 218097
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | corecount: 9
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | event service: False
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | sizes: {0: 2405134, 3: 2405340, 11: 2405368, 2558: 2430579, 2559: 2430578, 2561: 2439575, 2564: 2439759, 2567: 2439929}
[2025-06-04 07:40:08] 2025-06-04 11:39:56,274 | INFO     | --------------------------------------------------
[2025-06-04 07:40:08] 2025-06-04 11:39:56,275 | INFO     | 
[2025-06-04 07:40:08] 2025-06-04 11:39:56,275 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:40:08] 2025-06-04 11:39:56,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:40:08] 2025-06-04 11:39:56,299 | INFO     | job 6679293647 has completed (purged errors)
[2025-06-04 07:40:08] 2025-06-04 11:39:56,299 | INFO     | overall cleanup function is called
[2025-06-04 07:40:08] 2025-06-04 11:39:57,309 | INFO     | --- collectZombieJob: --- 10, [218097]
[2025-06-04 07:40:08] 2025-06-04 11:39:57,310 | INFO     | zombie collector waiting for pid 218097
[2025-06-04 07:40:08] 2025-06-04 11:39:57,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:40:08] 2025-06-04 11:39:57,310 | INFO     | collected zombie processes
[2025-06-04 07:40:08] 2025-06-04 11:39:57,310 | INFO     | will attempt to kill all subprocesses of pid=218097
[2025-06-04 07:40:08] 2025-06-04 11:39:57,500 | INFO     | process IDs to be killed: [218097] (in reverse order)
[2025-06-04 07:40:08] 2025-06-04 11:39:57,618 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:40:08] 2025-06-04 11:39:57,619 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:40:08] 2025-06-04 11:39:57,629 | INFO     | did not find any defunct processes belonging to 218097
[2025-06-04 07:40:08] 2025-06-04 11:39:57,637 | INFO     | did not find any defunct processes belonging to 218097
[2025-06-04 07:40:08] 2025-06-04 11:39:57,637 | INFO     | ready for new job
[2025-06-04 07:40:08] 2025-06-04 11:39:57,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:40:08] 2025-06-04 11:39:57,639 | INFO     | **************************************
[2025-06-04 07:40:08] 2025-06-04 11:39:57,639 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:40:08] 2025-06-04 11:39:57,639 | INFO     | **************************************
[2025-06-04 07:40:08] 2025-06-04 11:39:57,640 | INFO     | 
[2025-06-04 07:40:08] 2025-06-04 11:39:57,645 | INFO     | architecture information:
[2025-06-04 07:40:08] 2025-06-04 11:39:57,646 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:40:08] 2025-06-04 11:39:57,664 | INFO     | cat /etc/os-release:
[2025-06-04 07:40:08] NAME="CentOS Linux"
[2025-06-04 07:40:08] VERSION="7 (Core)"
[2025-06-04 07:40:08] ID="centos"
[2025-06-04 07:40:08] ID_LIKE="rhel fedora"
[2025-06-04 07:40:08] VERSION_ID="7"
[2025-06-04 07:40:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:40:08] ANSI_COLOR="0;31"
[2025-06-04 07:40:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:40:08] HOME_URL="https://www.centos.org/"
[2025-06-04 07:40:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:40:08] 
[2025-06-04 07:40:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:40:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:40:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:40:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:40:08] 
[2025-06-04 07:40:08] 2025-06-04 11:39:57,665 | INFO     | **************************************
[2025-06-04 07:40:08] 2025-06-04 11:39:58,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:40:08] 2025-06-04 11:39:58,191 | INFO     | sufficient remaining disk space (56013881344 B)
[2025-06-04 07:40:08] 2025-06-04 11:39:58,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:40:08] 2025-06-04 11:39:58,191 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:40:08] 2025-06-04 11:39:58,192 | INFO     | update_server=False
[2025-06-04 07:40:08] 2025-06-04 11:39:58,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:40:08] 2025-06-04 11:39:58,192 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:40:08] 2025-06-04 11:39:58,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:40:08] 2025-06-04 11:39:58,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:40:08] 2025-06-04 11:39:58,193 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:40:08] 2025-06-04 11:39:58,194 | INFO     | aborting loop
[2025-06-04 07:40:08] 2025-06-04 11:39:58,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:40:08] 2025-06-04 11:39:58,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:40:08] 2025-06-04 11:39:58,475 | INFO     | all payload control threads have been joined
[2025-06-04 07:40:08] 2025-06-04 11:39:58,630 | INFO     | all data control threads have been joined
[2025-06-04 07:40:08] 2025-06-04 11:39:58,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:40:08] 2025-06-04 11:39:58,827 | INFO     | all job control threads have been joined
[2025-06-04 07:40:08] 2025-06-04 11:39:59,196 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:39:59,200 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:39:59,376 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:39:59,481 | INFO     | [payload] control thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:39:59,636 | INFO     | [data] control thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:39:59,833 | INFO     | [job] control thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:39:59,895 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:39:59,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:00,196 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:00,320 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:00,361 | INFO     | [job] validate thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:00,416 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:00,553 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:00,617 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:00,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:40:08] 2025-06-04 11:40:01,899 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:02,653 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:40:08] 2025-06-04 11:40:03,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334787446592)>', '<ExcThread(monitor, started 140334222796544)>']
[2025-06-04 07:40:08] 2025-06-04 11:40:03,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:40:08] 2025-06-04 11:40:03,220 | INFO     | [monitor] control thread has ended
[2025-06-04 07:40:08] 2025-06-04 11:40:08,070 | INFO     | all workflow threads have been joined
[2025-06-04 07:40:08] 2025-06-04 11:40:08,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:40:08] 2025-06-04 11:40:08,071 | INFO     | traces error code: 0
[2025-06-04 07:40:08] 2025-06-04 11:40:08,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:40:08] 2025-06-04 11:40:08,185 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:40:08] 2025-06-04 11:40:08,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:40:08] 2025-06-04 11:40:08,193 [wrapper] pilotpid: 211464
[2025-06-04 07:40:08] 2025-06-04 11:40:08,197 [wrapper] Pilot exit status: 0
[2025-06-04 07:40:08] 2025-06-04 11:40:08,211 [wrapper] pandaids: 6679293647
[2025-06-04 07:40:08] 2025-06-04 11:40:08,280 [wrapper] cleanup supervisor_pilot 250805 211465
[2025-06-04 07:40:08] 2025-06-04 11:40:08,283 [wrapper] Test setup, not cleaning
[2025-06-04 07:40:08] 2025-06-04 11:40:08,286 [wrapper] apfmon messages muted
[2025-06-04 07:40:08] 2025-06-04 11:40:08,288 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:40:08] 2025-06-04 11:40:08,291 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:40:08]  *** Error codes and diagnostics ***
[2025-06-04 07:40:08]     "exeErrorCode": 0,
[2025-06-04 07:40:08]     "exeErrorDiag": "",
[2025-06-04 07:40:08]     "pilotErrorCode": 0,
[2025-06-04 07:40:08]     "pilotErrorDiag": "",
[2025-06-04 07:40:08]  *** Listing of results directory ***
[2025-06-04 07:40:08] total 390028
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:56 queuedata.json
[2025-06-04 07:40:08] -rwx------ 1 boincer umatlas     37140 Jun  4 04:57 runpilot2-wrapper.sh
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:40:08] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:56 run_atlas
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:56 job.xml
[2025-06-04 07:40:08] -rw-r--r-- 2 boincer umatlas 216945017 Jun  4 06:56 EVNT.45006593._001777.pool.root.1
[2025-06-04 07:40:08] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:56 start_atlas.sh
[2025-06-04 07:40:08] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:56 shared
[2025-06-04 07:40:08] -rw-r--r-- 2 boincer umatlas    508887 Jun  4 06:56 input.tar.gz
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:56 boinc_lockfile
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:56 pandaJob.out
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas    986812 Jun  4 06:56 agis_schedconf.cvmfs.json
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas   1603667 Jun  4 06:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:40:08] drwx------ 4 boincer umatlas      4096 Jun  4 06:56 pilot3
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 07:27 init_data.xml
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas        95 Jun  4 07:39 pilot_heartbeat.json
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas 177438401 Jun  4 07:39 HITS.45006595._056115.pool.root.1
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:39 boinc_task_state.xml
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas      1045 Jun  4 07:39 memory_monitor_summary.json
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas    301685 Jun  4 07:39 log.45006595._056115.job.log.tgz.1
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas      7727 Jun  4 07:39 heartbeat.json
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:39 boinc_mmap_file
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:39 wrapper_checkpoint.txt
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas      4476 Jun  4 07:40 pilotlog.txt
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas    280607 Jun  4 07:40 log.45006595._056115.job.log.1
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas       357 Jun  4 07:40 output.list
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:40 runtime_log
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas    604160 Jun  4 07:40 result.tar.gz
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 07:40 runtime_log.err
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas       657 Jun  4 07:40 4puMDmU7yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgsnKDmMIaVsn.diag
[2025-06-04 07:40:08] -rw-r--r-- 1 boincer umatlas     21455 Jun  4 07:40 stderr.txt
[2025-06-04 07:40:08] HITS file was successfully produced:
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas 177438401 Jun  4 07:39 shared/HITS.pool.root.1
[2025-06-04 07:40:08]  *** Contents of shared directory: ***
[2025-06-04 07:40:08] total 386260
[2025-06-04 07:40:08] -rw-r--r-- 2 boincer umatlas 216945017 Jun  4 06:56 ATLAS.root_0
[2025-06-04 07:40:08] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:56 start_atlas.sh
[2025-06-04 07:40:08] -rw-r--r-- 2 boincer umatlas    508887 Jun  4 06:56 input.tar.gz
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas 177438401 Jun  4 07:39 HITS.pool.root.1
[2025-06-04 07:40:08] -rw------- 1 boincer umatlas    604160 Jun  4 07:40 result.tar.gz
07:40:09 (207876): run_atlas exited; CPU time 20430.524342
07:40:09 (207876): called boinc_finish(0)

</stderr_txt>
]]>

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