Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:50:57 (31616): wrapper (7.7.26015): starting
06:50:57 (31616): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:50:57] Arguments: --nthreads 12
[2025-06-04 06:50:57] Threads: 12
[2025-06-04 06:50:57] Checking for CVMFS
[2025-06-04 06:50:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:50:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:50:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:50:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:50:58] 2.11.2.0 2913 35584 85476 146777 3 58 18563213 20275201 1 130560 0 15969866 99.983 6407123 7710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:50:58] CVMFS is ok
[2025-06-04 06:50:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:50:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:50:58] Further information can be found at the LHC@home message board.
[2025-06-04 06:50:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:50:58] Checking for apptainer binary...
[2025-06-04 06:50:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:50:58] Running /usr/bin/apptainer --version
[2025-06-04 06:50:58] apptainer version 1.3.2-1.el7
[2025-06-04 06:50:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:50:59] c-205-6.aglt2.org
[2025-06-04 06:50:59] apptainer works
[2025-06-04 06:50:59] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:50:59] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:50:59] Starting ATLAS job with PandaID=6679231604
[2025-06-04 06:50:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:58:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:58:31]  is_altstaged=None
[2025-06-04 07:58:31]  is_tar=False
[2025-06-04 07:58:31]  lfn=log.45006595._056032.job.log.tgz.1
[2025-06-04 07:58:31]  mtime=0
[2025-06-04 07:58:31]  protocol_id=None
[2025-06-04 07:58:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:58:31]  replicas=None
[2025-06-04 07:58:31]  scope=mc23_13p6TeV
[2025-06-04 07:58:31]  status=None
[2025-06-04 07:58:31]  status_code=0
[2025-06-04 07:58:31]  storage_token=
[2025-06-04 07:58:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679231604/log.45006595._056032.job.log.tgz.1
[2025-06-04 07:58:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/fb/log.45006595._056032.job.log.tgz.1
[2025-06-04 07:58:31]  workdir=None
[2025-06-04 07:58:31] ]
[2025-06-04 07:58:31] 2025-06-04 11:58:02,048 | INFO     | transferring file log.45006595._056032.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679231604/log.45006595._056032.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:58:31] 2025-06-04 11:58:02,048 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679231604/log.45006595._056032.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056032.job
[2025-06-04 07:58:31] 2025-06-04 11:58:02,071 | INFO     | adding to output.list: log.45006595._056032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/fb/log.45006595._056032.job.log.tg
[2025-06-04 07:58:31] 2025-06-04 11:58:02,072 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:58:31] 2025-06-04 11:58:02,072 | INFO     | summary of transferred files:
[2025-06-04 07:58:31] 2025-06-04 11:58:02,072 | INFO     |  -- lfn=log.45006595._056032.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:58:31] 2025-06-04 11:58:02,072 | INFO     | stage-out finished correctly
[2025-06-04 07:58:31] 2025-06-04 11:58:03,276 | INFO     | PID=2977 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 07:58:31] 2025-06-04 11:58:03,412 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:58:31] 2025-06-04 11:58:05,588 | INFO     | job 6679231604 has state=finished
[2025-06-04 07:58:31] 2025-06-04 11:58:05,588 | INFO     | preparing for final server update for job 6679231604 in state='finished'
[2025-06-04 07:58:31] 2025-06-04 11:58:05,589 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:58:31] 2025-06-04 11:58:05,589 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:58:31] 2025-06-04 11:58:05,589 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:58:31] 2025-06-04 11:58:05,590 | INFO     | job 6679231604 has finished - writing final server update
[2025-06-04 07:58:31] 2025-06-04 11:58:05,590 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:58:31] 2025-06-04 11:58:05,591 | INFO     | executing command: lscpu
[2025-06-04 07:58:31] 2025-06-04 11:58:05,619 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:58:31] 2025-06-04 11:58:06,282 | INFO     | 4016s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 07:58:31] 2025-06-04 11:58:06,591 | WARNING  | process 9406 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:58:31] 2025-06-04 11:58:06,591 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679231604/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:58:31] 2025-06-04 11:58:06,682 | INFO     | number of running child processes to parent process 9406: 1
[2025-06-04 07:58:31] 2025-06-04 11:58:06,682 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:58:31] 2025-06-04 11:58:09,185 | INFO     | monitor loop #300: job 0:6679231604 is in state 'finished'
[2025-06-04 07:58:31] 2025-06-04 11:58:09,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:58:31] 2025-06-04 11:58:10,503 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 07:58:31] 2025-06-04 11:58:10,504 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679231604/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:58:31] 2025-06-04 11:58:10,504 | INFO     | extracted standard info from prmon json
[2025-06-04 07:58:31] 2025-06-04 11:58:10,505 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:58:31] 2025-06-04 11:58:10,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:58:31] 2025-06-04 11:58:10,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:58:31] 2025-06-04 11:58:10,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:58:31] 2025-06-04 11:58:10,508 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:58:31] 2025-06-04 11:58:10,508 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 07:58:31] 2025-06-04 11:58:10,508 | INFO     | sum of deviations: -1653182716.0
[2025-06-04 07:58:31] 2025-06-04 11:58:10,509 | INFO     | mean x: 1749036377.0
[2025-06-04 07:58:31] 2025-06-04 11:58:10,509 | INFO     | mean y: 2685655.474576271
[2025-06-04 07:58:31] 2025-06-04 11:58:10,509 | INFO     | -- intersect: 45418804606.16702
[2025-06-04 07:58:31] 2025-06-04 11:58:10,509 | INFO     | intersect: 45418804606.16702
[2025-06-04 07:58:31] 2025-06-04 11:58:10,509 | INFO     | chi2: 0.07403226176472553
[2025-06-04 07:58:31] 2025-06-04 11:58:10,509 | INFO     | -- intersect: 45418804606.16702
[2025-06-04 07:58:31] 2025-06-04 11:58:10,509 | INFO     | current memory leak: -25.97 B/s (using 59 data points, chi2=0.07)
[2025-06-04 07:58:31] 2025-06-04 11:58:10,510 | INFO     | ..............................
[2025-06-04 07:58:31] 2025-06-04 11:58:10,510 | INFO     | . Timing measurements:
[2025-06-04 07:58:31] 2025-06-04 11:58:10,510 | INFO     | . get job = 0 s
[2025-06-04 07:58:31] 2025-06-04 11:58:10,510 | INFO     | . initial setup = 2 s
[2025-06-04 07:58:31] 2025-06-04 11:58:10,510 | INFO     | . payload setup = 9 s
[2025-06-04 07:58:31] 2025-06-04 11:58:10,510 | INFO     | . stage-in = 0 s
[2025-06-04 07:58:31] 2025-06-04 11:58:10,510 | INFO     | . payload execution = 3979 s
[2025-06-04 07:58:31] 2025-06-04 11:58:10,511 | INFO     | . stage-out = 0 s
[2025-06-04 07:58:31] 2025-06-04 11:58:10,511 | INFO     | . log creation = 0 s
[2025-06-04 07:58:31] 2025-06-04 11:58:10,511 | INFO     | ..............................
[2025-06-04 07:58:31] 2025-06-04 11:58:11,045 | INFO     | 
[2025-06-04 07:58:31] 2025-06-04 11:58:11,045 | INFO     | job summary report
[2025-06-04 07:58:31] 2025-06-04 11:58:11,046 | INFO     | --------------------------------------------------
[2025-06-04 07:58:31] 2025-06-04 11:58:11,046 | INFO     | PanDA job id: 6679231604
[2025-06-04 07:58:31] 2025-06-04 11:58:11,046 | INFO     | task id: 45006595
[2025-06-04 07:58:31] 2025-06-04 11:58:11,046 | INFO     | errors: (none)
[2025-06-04 07:58:31] 2025-06-04 11:58:11,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:58:31] 2025-06-04 11:58:11,046 | INFO     | pilot state: finished 
[2025-06-04 07:58:31] 2025-06-04 11:58:11,047 | INFO     | transexitcode: 0
[2025-06-04 07:58:31] 2025-06-04 11:58:11,047 | INFO     | exeerrorcode: 0
[2025-06-04 07:58:31] 2025-06-04 11:58:11,047 | INFO     | exeerrordiag: 
[2025-06-04 07:58:31] 2025-06-04 11:58:11,047 | INFO     | exitcode: 0
[2025-06-04 07:58:31] 2025-06-04 11:58:11,047 | INFO     | exitmsg: OK
[2025-06-04 07:58:31] 2025-06-04 11:58:11,047 | INFO     | cpuconsumptiontime: 41378 s
[2025-06-04 07:58:31] 2025-06-04 11:58:11,048 | INFO     | nevents: 400
[2025-06-04 07:58:31] 2025-06-04 11:58:11,048 | INFO     | neventsw: 0
[2025-06-04 07:58:31] 2025-06-04 11:58:11,048 | INFO     | pid: 9406
[2025-06-04 07:58:31] 2025-06-04 11:58:11,048 | INFO     | pgrp: 9406
[2025-06-04 07:58:31] 2025-06-04 11:58:11,048 | INFO     | corecount: 12
[2025-06-04 07:58:31] 2025-06-04 11:58:11,048 | INFO     | event service: False
[2025-06-04 07:58:31] 2025-06-04 11:58:11,048 | INFO     | sizes: {0: 2405134, 5: 2405340, 11: 2405396, 3992: 2431074, 3994: 2440015, 3996: 2440071, 4003: 2440369}
[2025-06-04 07:58:31] 2025-06-04 11:58:11,049 | INFO     | --------------------------------------------------
[2025-06-04 07:58:31] 2025-06-04 11:58:11,049 | INFO     | 
[2025-06-04 07:58:31] 2025-06-04 11:58:11,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:58:31] 2025-06-04 11:58:11,072 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,073 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,073 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,075 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:58:31] 2025-06-04 11:58:11,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,076 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:58:31] 2025-06-04 11:58:11,076 | INFO     | job 6679231604 has completed (purged errors)
[2025-06-04 07:58:31] 2025-06-04 11:58:11,076 | INFO     | overall cleanup function is called
[2025-06-04 07:58:31] 2025-06-04 11:58:12,084 | INFO     | --- collectZombieJob: --- 10, [9406]
[2025-06-04 07:58:31] 2025-06-04 11:58:12,084 | INFO     | zombie collector waiting for pid 9406
[2025-06-04 07:58:31] 2025-06-04 11:58:12,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:58:31] 2025-06-04 11:58:12,085 | INFO     | collected zombie processes
[2025-06-04 07:58:31] 2025-06-04 11:58:12,085 | INFO     | will attempt to kill all subprocesses of pid=9406
[2025-06-04 07:58:31] 2025-06-04 11:58:12,173 | INFO     | process IDs to be killed: [9406] (in reverse order)
[2025-06-04 07:58:31] 2025-06-04 11:58:12,222 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:58:31] 2025-06-04 11:58:12,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:58:31] 2025-06-04 11:58:12,227 | INFO     | did not find any defunct processes belonging to 9406
[2025-06-04 07:58:31] 2025-06-04 11:58:12,230 | INFO     | did not find any defunct processes belonging to 9406
[2025-06-04 07:58:31] 2025-06-04 11:58:12,230 | INFO     | ready for new job
[2025-06-04 07:58:31] 2025-06-04 11:58:12,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:58:31] 2025-06-04 11:58:12,231 | INFO     | **************************************
[2025-06-04 07:58:31] 2025-06-04 11:58:12,231 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:58:31] 2025-06-04 11:58:12,231 | INFO     | **************************************
[2025-06-04 07:58:31] 2025-06-04 11:58:12,231 | INFO     | 
[2025-06-04 07:58:31] 2025-06-04 11:58:12,232 | INFO     | architecture information:
[2025-06-04 07:58:31] 2025-06-04 11:58:12,232 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:58:31] 2025-06-04 11:58:12,247 | INFO     | cat /etc/os-release:
[2025-06-04 07:58:31] NAME="CentOS Linux"
[2025-06-04 07:58:31] VERSION="7 (Core)"
[2025-06-04 07:58:31] ID="centos"
[2025-06-04 07:58:31] ID_LIKE="rhel fedora"
[2025-06-04 07:58:31] VERSION_ID="7"
[2025-06-04 07:58:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:58:31] ANSI_COLOR="0;31"
[2025-06-04 07:58:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:58:31] HOME_URL="https://www.centos.org/"
[2025-06-04 07:58:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:58:31] 
[2025-06-04 07:58:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:58:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:58:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:58:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:58:31] 
[2025-06-04 07:58:31] 2025-06-04 11:58:12,247 | INFO     | **************************************
[2025-06-04 07:58:31] 2025-06-04 11:58:12,750 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:58:31] 2025-06-04 11:58:12,766 | INFO     | sufficient remaining disk space (29425139712 B)
[2025-06-04 07:58:31] 2025-06-04 11:58:12,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:58:31] 2025-06-04 11:58:12,767 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:58:31] 2025-06-04 11:58:12,767 | INFO     | update_server=False
[2025-06-04 07:58:31] 2025-06-04 11:58:12,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:58:31] 2025-06-04 11:58:12,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:58:31] 2025-06-04 11:58:12,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:58:31] 2025-06-04 11:58:12,768 | INFO     | aborting loop
[2025-06-04 07:58:31] 2025-06-04 11:58:13,029 | INFO     | all data control threads have been joined
[2025-06-04 07:58:31] 2025-06-04 11:58:13,302 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:58:31] 2025-06-04 11:58:13,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:58:31] 2025-06-04 11:58:13,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:58:31] 2025-06-04 11:58:13,549 | INFO     | all payload control threads have been joined
[2025-06-04 07:58:31] 2025-06-04 11:58:13,769 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:13,772 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:13,787 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:13,793 | INFO     | [job] validate thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:13,906 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:14,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:58:31] 2025-06-04 11:58:14,034 | INFO     | [data] control thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:14,139 | INFO     | all job control threads have been joined
[2025-06-04 07:58:31] 2025-06-04 11:58:14,209 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:14,467 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:14,478 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:14,555 | INFO     | [payload] control thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:14,771 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:14,802 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:15,142 | INFO     | [job] control thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:15,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:58:31] 2025-06-04 11:58:16,612 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:18,009 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:23,647 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:58:31] 2025-06-04 11:58:24,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:58:31] 2025-06-04 11:58:26,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228497717056)>', '<ExcThread(monitor, started 140227905570560)>']
[2025-06-04 07:58:31] 2025-06-04 11:58:26,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:58:31] 2025-06-04 11:58:26,365 | INFO     | [monitor] control thread has ended
[2025-06-04 07:58:31] 2025-06-04 11:58:31,123 | INFO     | all workflow threads have been joined
[2025-06-04 07:58:31] 2025-06-04 11:58:31,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:58:31] 2025-06-04 11:58:31,123 | INFO     | traces error code: 0
[2025-06-04 07:58:31] 2025-06-04 11:58:31,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:58:31] 2025-06-04 11:58:31,209 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:58:31] 2025-06-04 11:58:31,213 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:58:31] 2025-06-04 11:58:31,216 [wrapper] pilotpid: 2977
[2025-06-04 07:58:31] 2025-06-04 11:58:31,220 [wrapper] Pilot exit status: 0
[2025-06-04 07:58:31] 2025-06-04 11:58:31,235 [wrapper] pandaids: 6679231604
[2025-06-04 07:58:31] 2025-06-04 11:58:31,275 [wrapper] cleanup supervisor_pilot 22900 2978
[2025-06-04 07:58:31] 2025-06-04 11:58:31,279 [wrapper] Test setup, not cleaning
[2025-06-04 07:58:31] 2025-06-04 11:58:31,283 [wrapper] apfmon messages muted
[2025-06-04 07:58:31] 2025-06-04 11:58:31,286 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:58:31] 2025-06-04 11:58:31,290 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:58:31]  *** Error codes and diagnostics ***
[2025-06-04 07:58:31]     "exeErrorCode": 0,
[2025-06-04 07:58:31]     "exeErrorDiag": "",
[2025-06-04 07:58:31]     "pilotErrorCode": 0,
[2025-06-04 07:58:31]     "pilotErrorDiag": "",
[2025-06-04 07:58:31]  *** Listing of results directory ***
[2025-06-04 07:58:31] total 386688
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 07:58:31] -rwx------ 1 boincer umatlas     37140 Jun  4 04:56 runpilot2-wrapper.sh
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:56 queuedata.json
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:58:31] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:50 run_atlas
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:50 job.xml
[2025-06-04 07:58:31] -rw-r--r-- 2 boincer umatlas 212985600 Jun  4 06:50 EVNT.45006593._001258.pool.root.1
[2025-06-04 07:58:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:50 start_atlas.sh
[2025-06-04 07:58:31] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:50 shared
[2025-06-04 07:58:31] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:50 input.tar.gz
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:50 boinc_lockfile
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:50 pandaJob.out
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas    986812 Jun  4 06:51 agis_schedconf.cvmfs.json
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas   1603667 Jun  4 06:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:58:31] drwx------ 4 boincer umatlas      4096 Jun  4 06:51 pilot3
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas 177661787 Jun  4 07:57 HITS.45006595._056032.pool.root.1
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:57 boinc_task_state.xml
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas      1048 Jun  4 07:57 memory_monitor_summary.json
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas    352602 Jun  4 07:58 log.45006595._056032.job.log.tgz.1
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas        95 Jun  4 07:58 pilot_heartbeat.json
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 07:58 init_data.xml
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:58 boinc_mmap_file
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:58 wrapper_checkpoint.txt
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas      7748 Jun  4 07:58 heartbeat.json
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas      4425 Jun  4 07:58 pilotlog.txt
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas    389801 Jun  4 07:58 log.45006595._056032.job.log.1
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas       357 Jun  4 07:58 output.list
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:58 runtime_log
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas    757760 Jun  4 07:58 result.tar.gz
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas       658 Jun  4 07:58 rRIKDm45yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKrnKDmbqYXmm.diag
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 07:58 runtime_log.err
[2025-06-04 07:58:31] -rw-r--r-- 1 boincer umatlas     21454 Jun  4 07:58 stderr.txt
[2025-06-04 07:58:31] HITS file was successfully produced:
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas 177661787 Jun  4 07:57 shared/HITS.pool.root.1
[2025-06-04 07:58:31]  *** Contents of shared directory: ***
[2025-06-04 07:58:31] total 382760
[2025-06-04 07:58:31] -rw-r--r-- 2 boincer umatlas 212985600 Jun  4 06:50 ATLAS.root_0
[2025-06-04 07:58:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:50 start_atlas.sh
[2025-06-04 07:58:31] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:50 input.tar.gz
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas 177661787 Jun  4 07:57 HITS.pool.root.1
[2025-06-04 07:58:31] -rw------- 1 boincer umatlas    757760 Jun  4 07:58 result.tar.gz
07:58:32 (31616): run_atlas exited; CPU time 41351.314968
07:58:32 (31616): called boinc_finish(0)

</stderr_txt>
]]>

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