Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:47:10 (31351): wrapper (7.7.26015): starting
06:47:10 (31351): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 06:47:10] Arguments: --nthreads 10
[2025-06-04 06:47:10] Threads: 10
[2025-06-04 06:47:10] Checking for CVMFS
[2025-06-04 06:47:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:47:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:47:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:47:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:47:11] 2.11.2.0 21125 93879 247032 146777 2 74 17445071 18432000 2737 130560 0 192863599 98.515 611238808 38139 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:47:11] CVMFS is ok
[2025-06-04 06:47:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:47:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:47:11] Further information can be found at the LHC@home message board.
[2025-06-04 06:47:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:47:11] Checking for apptainer binary...
[2025-06-04 06:47:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:47:11] Running /usr/bin/apptainer --version
[2025-06-04 06:47:11] apptainer version 1.3.2-1.el7
[2025-06-04 06:47:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:47:12] c-210-30.aglt2.org
[2025-06-04 06:47:12] apptainer works
[2025-06-04 06:47:12] Set ATHENA_PROC_NUMBER=10
[2025-06-04 06:47:12] Set ATHENA_CORE_NUMBER=10
[2025-06-04 06:47:12] Starting ATLAS job with PandaID=6679158334
[2025-06-04 06:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:52:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:52:56]  mtime=0
[2025-06-04 07:52:56]  protocol_id=None
[2025-06-04 07:52:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:52:56]  replicas=None
[2025-06-04 07:52:56]  scope=mc23_13p6TeV
[2025-06-04 07:52:56]  status=None
[2025-06-04 07:52:56]  status_code=0
[2025-06-04 07:52:56]  storage_token=
[2025-06-04 07:52:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679158334/log.45006595._055918.job.log.tgz.1
[2025-06-04 07:52:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/cf/log.45006595._055918.job.log.tgz.1
[2025-06-04 07:52:56]  workdir=None
[2025-06-04 07:52:56] ]
[2025-06-04 07:52:56] 2025-06-04 11:52:29,809 | INFO     | transferring file log.45006595._055918.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679158334/log.45006595._055918.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:52:56] 2025-06-04 11:52:29,809 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679158334/log.45006595._055918.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055918.job
[2025-06-04 07:52:56] 2025-06-04 11:52:29,831 | INFO     | adding to output.list: log.45006595._055918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/cf/log.45006595._055918.job.log.tg
[2025-06-04 07:52:56] 2025-06-04 11:52:29,832 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:52:56] 2025-06-04 11:52:29,832 | INFO     | summary of transferred files:
[2025-06-04 07:52:56] 2025-06-04 11:52:29,832 | INFO     |  -- lfn=log.45006595._055918.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:52:56] 2025-06-04 11:52:29,832 | INFO     | stage-out finished correctly
[2025-06-04 07:52:56] 2025-06-04 11:52:30,018 | WARNING  | process 846 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:52:56] 2025-06-04 11:52:30,018 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679158334/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:52:56] 2025-06-04 11:52:30,162 | INFO     | number of running child processes to parent process 846: 1
[2025-06-04 07:52:56] 2025-06-04 11:52:30,162 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:52:56] 2025-06-04 11:52:32,274 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:52:56] 2025-06-04 11:52:32,663 | INFO     | monitor loop #298: job 0:6679158334 is in state 'finished'
[2025-06-04 07:52:56] 2025-06-04 11:52:32,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:52:56] 2025-06-04 11:52:32,872 | INFO     | job 6679158334 has state=finished
[2025-06-04 07:52:56] 2025-06-04 11:52:32,872 | INFO     | preparing for final server update for job 6679158334 in state='finished'
[2025-06-04 07:52:56] 2025-06-04 11:52:32,943 | INFO     | PID=34983 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 07:52:56] 2025-06-04 11:52:32,943 | INFO     | .. there are 7 such processes running
[2025-06-04 07:52:56] 2025-06-04 11:52:32,959 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 07:52:56] 2025-06-04 11:52:32,960 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:52:56] 2025-06-04 11:52:32,960 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:52:56] 2025-06-04 11:52:32,960 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:52:56] 2025-06-04 11:52:32,960 | INFO     | job 6679158334 has finished - writing final server update
[2025-06-04 07:52:56] 2025-06-04 11:52:32,961 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:52:56] 2025-06-04 11:52:32,964 | INFO     | executing command: lscpu
[2025-06-04 07:52:56] 2025-06-04 11:52:33,012 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:52:56] 2025-06-04 11:52:35,166 | INFO     | monitor loop #299: job 0:6679158334 is in state 'finished'
[2025-06-04 07:52:56] 2025-06-04 11:52:35,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:52:56] 2025-06-04 11:52:36,814 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:52:56] 2025-06-04 11:52:36,814 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679158334/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:52:56] 2025-06-04 11:52:36,814 | INFO     | extracted standard info from prmon json
[2025-06-04 07:52:56] 2025-06-04 11:52:36,814 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:52:56] 2025-06-04 11:52:36,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:52:56] 2025-06-04 11:52:36,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:52:56] 2025-06-04 11:52:36,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | sum of deviations: -2053212785.9999995
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | mean x: 1749036080.0
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | mean y: 2596425.3859649124
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | -- intersect: 62557798058.8585
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | intersect: 62557798058.8585
[2025-06-04 07:52:56] 2025-06-04 11:52:36,816 | INFO     | chi2: 0.012855559087960221
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | -- intersect: 62557798058.8585
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | current memory leak: -35.77 B/s (using 57 data points, chi2=0.01)
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | ..............................
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . Timing measurements:
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . get job = 0 s
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . initial setup = 2 s
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . payload setup = 6 s
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . stage-in = 0 s
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . payload execution = 3882 s
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . stage-out = 0 s
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | . log creation = 0 s
[2025-06-04 07:52:56] 2025-06-04 11:52:36,817 | INFO     | ..............................
[2025-06-04 07:52:56] 2025-06-04 11:52:37,192 | INFO     | 
[2025-06-04 07:52:56] 2025-06-04 11:52:37,193 | INFO     | job summary report
[2025-06-04 07:52:56] 2025-06-04 11:52:37,193 | INFO     | --------------------------------------------------
[2025-06-04 07:52:56] 2025-06-04 11:52:37,193 | INFO     | PanDA job id: 6679158334
[2025-06-04 07:52:56] 2025-06-04 11:52:37,193 | INFO     | task id: 45006595
[2025-06-04 07:52:56] 2025-06-04 11:52:37,193 | INFO     | errors: (none)
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | pilot state: finished 
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | transexitcode: 0
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | exeerrorcode: 0
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | exeerrordiag: 
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | exitcode: 0
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | exitmsg: OK
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | cpuconsumptiontime: 36147 s
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | nevents: 400
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | neventsw: 0
[2025-06-04 07:52:56] 2025-06-04 11:52:37,194 | INFO     | pid: 846
[2025-06-04 07:52:56] 2025-06-04 11:52:37,195 | INFO     | pgrp: 846
[2025-06-04 07:52:56] 2025-06-04 11:52:37,195 | INFO     | corecount: 10
[2025-06-04 07:52:56] 2025-06-04 11:52:37,195 | INFO     | event service: False
[2025-06-04 07:52:56] 2025-06-04 11:52:37,195 | INFO     | sizes: {0: 2404907, 1: 2405162, 4: 2405368, 11: 2405396, 3892: 2431185, 3893: 2440126, 3896: 2440310, 3900: 2440480}
[2025-06-04 07:52:56] 2025-06-04 11:52:37,195 | INFO     | --------------------------------------------------
[2025-06-04 07:52:56] 2025-06-04 11:52:37,195 | INFO     | 
[2025-06-04 07:52:56] 2025-06-04 11:52:37,195 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:52:56] 2025-06-04 11:52:37,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:52:56] 2025-06-04 11:52:37,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:52:56] 2025-06-04 11:52:37,223 | INFO     | job 6679158334 has completed (purged errors)
[2025-06-04 07:52:56] 2025-06-04 11:52:37,223 | INFO     | overall cleanup function is called
[2025-06-04 07:52:56] 2025-06-04 11:52:38,231 | INFO     | --- collectZombieJob: --- 10, [846]
[2025-06-04 07:52:56] 2025-06-04 11:52:38,231 | INFO     | zombie collector waiting for pid 846
[2025-06-04 07:52:56] 2025-06-04 11:52:38,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:52:56] 2025-06-04 11:52:38,231 | INFO     | collected zombie processes
[2025-06-04 07:52:56] 2025-06-04 11:52:38,231 | INFO     | will attempt to kill all subprocesses of pid=846
[2025-06-04 07:52:56] 2025-06-04 11:52:38,325 | INFO     | process IDs to be killed: [846] (in reverse order)
[2025-06-04 07:52:56] 2025-06-04 11:52:38,398 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:52:56] 2025-06-04 11:52:38,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:52:56] 2025-06-04 11:52:38,402 | INFO     | did not find any defunct processes belonging to 846
[2025-06-04 07:52:56] 2025-06-04 11:52:38,406 | INFO     | did not find any defunct processes belonging to 846
[2025-06-04 07:52:56] 2025-06-04 11:52:38,407 | INFO     | ready for new job
[2025-06-04 07:52:56] 2025-06-04 11:52:38,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:52:56] 2025-06-04 11:52:38,408 | INFO     | **************************************
[2025-06-04 07:52:56] 2025-06-04 11:52:38,408 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:52:56] 2025-06-04 11:52:38,408 | INFO     | **************************************
[2025-06-04 07:52:56] 2025-06-04 11:52:38,409 | INFO     | 
[2025-06-04 07:52:56] 2025-06-04 11:52:38,411 | INFO     | architecture information:
[2025-06-04 07:52:56] 2025-06-04 11:52:38,411 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:52:56] 2025-06-04 11:52:38,426 | INFO     | cat /etc/os-release:
[2025-06-04 07:52:56] NAME="CentOS Linux"
[2025-06-04 07:52:56] VERSION="7 (Core)"
[2025-06-04 07:52:56] ID="centos"
[2025-06-04 07:52:56] ID_LIKE="rhel fedora"
[2025-06-04 07:52:56] VERSION_ID="7"
[2025-06-04 07:52:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:52:56] ANSI_COLOR="0;31"
[2025-06-04 07:52:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:52:56] HOME_URL="https://www.centos.org/"
[2025-06-04 07:52:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:52:56] 
[2025-06-04 07:52:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:52:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:52:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:52:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:52:56] 
[2025-06-04 07:52:56] 2025-06-04 11:52:38,426 | INFO     | **************************************
[2025-06-04 07:52:56] 2025-06-04 11:52:38,929 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:52:56] 2025-06-04 11:52:38,947 | INFO     | sufficient remaining disk space (56782487552 B)
[2025-06-04 07:52:56] 2025-06-04 11:52:38,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:52:56] 2025-06-04 11:52:38,948 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:52:56] 2025-06-04 11:52:38,948 | INFO     | update_server=False
[2025-06-04 07:52:56] 2025-06-04 11:52:38,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:52:56] 2025-06-04 11:52:38,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:52:56] 2025-06-04 11:52:38,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:52:56] 2025-06-04 11:52:38,949 | INFO     | aborting loop
[2025-06-04 07:52:56] 2025-06-04 11:52:38,959 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:52:56] 2025-06-04 11:52:38,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:52:56] 2025-06-04 11:52:38,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:52:56] 2025-06-04 11:52:39,491 | INFO     | all payload control threads have been joined
[2025-06-04 07:52:56] 2025-06-04 11:52:39,586 | INFO     | all data control threads have been joined
[2025-06-04 07:52:56] 2025-06-04 11:52:39,954 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:39,955 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:40,157 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:40,279 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:40,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:52:56] 2025-06-04 11:52:40,497 | INFO     | [payload] control thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:40,544 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:40,556 | INFO     | all job control threads have been joined
[2025-06-04 07:52:56] 2025-06-04 11:52:40,591 | INFO     | [data] control thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:40,701 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:41,072 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:41,328 | INFO     | [job] validate thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:41,522 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:41,561 | INFO     | [job] control thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:41,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:52:56] 2025-06-04 11:52:42,409 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:42,882 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:42,955 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:49,271 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:52:56] 2025-06-04 11:52:50,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:52:56] 2025-06-04 11:52:51,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140446127241024)>', '<ExcThread(monitor, started 140445908735744)>']
[2025-06-04 07:52:56] 2025-06-04 11:52:52,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:52:56] 2025-06-04 11:52:52,020 | INFO     | [monitor] control thread has ended
[2025-06-04 07:52:56] 2025-06-04 11:52:56,156 | INFO     | all workflow threads have been joined
[2025-06-04 07:52:56] 2025-06-04 11:52:56,156 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:52:56] 2025-06-04 11:52:56,157 | INFO     | traces error code: 0
[2025-06-04 07:52:56] 2025-06-04 11:52:56,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:52:56] 2025-06-04 11:52:56,253 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:52:56] 2025-06-04 11:52:56,257 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:52:56] 2025-06-04 11:52:56,260 [wrapper] pilotpid: 34983
[2025-06-04 07:52:56] 2025-06-04 11:52:56,263 [wrapper] Pilot exit status: 0
[2025-06-04 07:52:56] 2025-06-04 11:52:56,277 [wrapper] pandaids: 6679158334
[2025-06-04 07:52:56] 2025-06-04 11:52:56,330 [wrapper] cleanup supervisor_pilot 10365 34984
[2025-06-04 07:52:56] 2025-06-04 11:52:56,334 [wrapper] Test setup, not cleaning
[2025-06-04 07:52:56] 2025-06-04 11:52:56,338 [wrapper] apfmon messages muted
[2025-06-04 07:52:56] 2025-06-04 11:52:56,341 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:52:56] 2025-06-04 11:52:56,345 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:52:56]  *** Error codes and diagnostics ***
[2025-06-04 07:52:56]     "exeErrorCode": 0,
[2025-06-04 07:52:56]     "exeErrorDiag": "",
[2025-06-04 07:52:56]     "pilotErrorCode": 0,
[2025-06-04 07:52:56]     "pilotErrorDiag": "",
[2025-06-04 07:52:56]  *** Listing of results directory ***
[2025-06-04 07:52:56] total 387360
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 07:52:56] -rwx------ 1 boincer umatlas     37140 Jun  4 04:51 runpilot2-wrapper.sh
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:51 queuedata.json
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:52:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:47 run_atlas
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:47 job.xml
[2025-06-04 07:52:56] -rw-r--r-- 2 boincer umatlas 217264291 Jun  4 06:47 EVNT.45006593._001253.pool.root.1
[2025-06-04 07:52:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:47 start_atlas.sh
[2025-06-04 07:52:56] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:47 shared
[2025-06-04 07:52:56] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:47 input.tar.gz
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:47 boinc_lockfile
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:47 pandaJob.out
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas    986812 Jun  4 06:47 agis_schedconf.cvmfs.json
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas   1603667 Jun  4 06:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:52:56] drwx------ 4 boincer umatlas      4096 Jun  4 06:47 pilot3
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas      6228 Jun  4 07:49 init_data.xml
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas        95 Jun  4 07:52 pilot_heartbeat.json
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas 174122795 Jun  4 07:52 HITS.45006595._055918.pool.root.1
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas       530 Jun  4 07:52 boinc_task_state.xml
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas      1048 Jun  4 07:52 memory_monitor_summary.json
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas    322446 Jun  4 07:52 log.45006595._055918.job.log.tgz.1
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas      7741 Jun  4 07:52 heartbeat.json
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:52 wrapper_checkpoint.txt
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:52 boinc_mmap_file
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas      4425 Jun  4 07:52 pilotlog.txt
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas    396497 Jun  4 07:52 log.45006595._055918.job.log.1
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas       357 Jun  4 07:52 output.list
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:52 runtime_log
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas    737280 Jun  4 07:52 result.tar.gz
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 07:52 runtime_log.err
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas       657 Jun  4 07:52 kErLDmT1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDqnKDmbwL5En.diag
[2025-06-04 07:52:56] -rw-r--r-- 1 boincer umatlas     21672 Jun  4 07:52 stderr.txt
[2025-06-04 07:52:56] HITS file was successfully produced:
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas 174122795 Jun  4 07:52 shared/HITS.pool.root.1
[2025-06-04 07:52:56]  *** Contents of shared directory: ***
[2025-06-04 07:52:56] total 383460
[2025-06-04 07:52:56] -rw-r--r-- 2 boincer umatlas 217264291 Jun  4 06:47 ATLAS.root_0
[2025-06-04 07:52:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:47 start_atlas.sh
[2025-06-04 07:52:56] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:47 input.tar.gz
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas 174122795 Jun  4 07:52 HITS.pool.root.1
[2025-06-04 07:52:56] -rw------- 1 boincer umatlas    737280 Jun  4 07:52 result.tar.gz
07:52:58 (31351): run_atlas exited; CPU time 36172.828452
07:52:58 (31351): called boinc_finish(0)

</stderr_txt>
]]>

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