Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:57:55 (3551759): wrapper (7.7.26015): starting
03:57:55 (3551759): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 03:57:55] Arguments: --nthreads 12
[2025-06-04 03:57:55] Threads: 12
[2025-06-04 03:57:55] Checking for CVMFS
[2025-06-04 03:57:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:57:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:57:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:57:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:57:55] 2.11.5.0 3380745 23808 235052 146777 3 484 38655720 45568000 15747 130560 0 225093180 99.792 146117326 26772 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 03:57:55] CVMFS is ok
[2025-06-04 03:57:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:57:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:57:55] Further information can be found at the LHC@home message board.
[2025-06-04 03:57:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:57:55] Checking for apptainer binary...
[2025-06-04 03:57:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:57:55] Running /usr/bin/apptainer --version
[2025-06-04 03:57:55] apptainer version 1.4.0-1.el9
[2025-06-04 03:57:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:57:56] wns0168.triumf.lcg
[2025-06-04 03:57:56] apptainer works
[2025-06-04 03:57:56] Set ATHENA_PROC_NUMBER=12
[2025-06-04 03:57:56] Set ATHENA_CORE_NUMBER=12
[2025-06-04 03:57:56] Starting ATLAS job with PandaID=6679173610
[2025-06-04 03:57:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:01:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:01:09] 2025-06-04 11:00:55,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | found no stored workdir sizes
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:01:09] 2025-06-04 11:00:55,719 | WARNING  | wrong length of table data, x=[1749034715.0], y=[1439.0] (must be same and length>=4)
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | ..............................
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . Timing measurements:
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . get job = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . initial setup = 3 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . payload setup = 6 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . stage-in = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . payload execution = 18 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | . stage-out = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | . log creation = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | ..............................
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679173610/pilotlog.txt
[2025-06-04 04:01:09] 2025-06-04 11:00:55,737 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 04:01:09] - Log from pilotlog.txt -
[2025-06-04 04:01:09] 2025-06-04 11:00:55,717 | INFO     | extracted standard info from prmon json
[2025-06-04 04:01:09] 2025-06-04 11:00:55,717 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:01:09] 2025-06-04 11:00:55,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | found no stored workdir sizes
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:01:09] 2025-06-04 11:00:55,719 | WARNING  | wrong length of table data, x=[1749034715.0], y=[1439.0] (must be same and length>=4)
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | ..............................
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . Timing measurements:
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . get job = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . initial setup = 3 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . payload setup = 6 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . stage-in = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . payload execution = 18 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | . stage-out = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | . log creation = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | ..............................
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679173610/pilotlog.txt
[2025-06-04 04:01:09] 2025-06-04 11:00:55,738 | WARNING  | 
[2025-06-04 04:01:09] [begin log extracts]
[2025-06-04 04:01:09] - Log from pilotlog.txt -
[2025-06-04 04:01:09] 2025-06-04 11:00:55,717 | INFO     | extracted standard info from prmon json
[2025-06-04 04:01:09] 2025-06-04 11:00:55,717 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:01:09] 2025-06-04 11:00:55,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | WARNING  | found no stored workdir sizes
[2025-06-04 04:01:09] 2025-06-04 11:00:55,718 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 04:01:09] 2025-06-04 11:00:55,719 | WARNING  | wrong length of table data, x=[1749034715.0], y=[1439.0] (must be same and length>=4)
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | ..............................
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . Timing measurements:
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . get job = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . initial setup = 3 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . payload setup = 6 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . stage-in = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,720 | INFO     | . payload execution = 18 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | . stage-out = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | . log creation = 0 s
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | ..............................
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:01:09] 2025-06-04 11:00:55,721 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679173610/pilotlog.txt
[2025-06-04 04:01:09] [end log extracts]
[2025-06-04 04:01:09] 2025-06-04 11:00:55,738 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 04:01:09] 2025-06-04 11:00:55,739 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 04:01:09] 2025-06-04 11:00:56,154 | INFO     | 
[2025-06-04 04:01:09] 2025-06-04 11:00:56,155 | INFO     | job summary report
[2025-06-04 04:01:09] 2025-06-04 11:00:56,155 | INFO     | --------------------------------------------------
[2025-06-04 04:01:09] 2025-06-04 11:00:56,155 | INFO     | PanDA job id: 6679173610
[2025-06-04 04:01:09] 2025-06-04 11:00:56,155 | INFO     | task id: 45006595
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 03:58:44,240 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | pilot state: failed 
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | transexitcode: 65
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | exeerrorcode: 65
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | exitcode: 65
[2025-06-04 04:01:09] 2025-06-04 11:00:56,156 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | cpuconsumptiontime: 22 s
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | nevents: 0
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | neventsw: 0
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | pid: 3561893
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | pgrp: 3561893
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | corecount: 12
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | event service: False
[2025-06-04 04:01:09] 2025-06-04 11:00:56,157 | INFO     | sizes: {0: 2405129, 6: 2405335, 11: 2405363, 28: 2432946, 31: 2432946, 152: 2433088}
[2025-06-04 04:01:09] 2025-06-04 11:00:56,158 | INFO     | --------------------------------------------------
[2025-06-04 04:01:09] 2025-06-04 11:00:56,158 | INFO     | 
[2025-06-04 04:01:09] 2025-06-04 11:00:56,158 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 04:01:09] 2025-06-04 11:00:56,177 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:01:09] 2025-06-04 11:00:56,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:01:09] 2025-06-04 11:00:56,182 | INFO     | job 6679173610 has completed (purged errors)
[2025-06-04 04:01:09] 2025-06-04 11:00:56,182 | INFO     | overall cleanup function is called
[2025-06-04 04:01:09] 2025-06-04 11:00:57,189 | INFO     | --- collectZombieJob: --- 10, [3561893]
[2025-06-04 04:01:09] 2025-06-04 11:00:57,190 | INFO     | zombie collector waiting for pid 3561893
[2025-06-04 04:01:09] 2025-06-04 11:00:57,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:01:09] 2025-06-04 11:00:57,190 | INFO     | collected zombie processes
[2025-06-04 04:01:09] 2025-06-04 11:00:57,190 | INFO     | will attempt to kill all subprocesses of pid=3561893
[2025-06-04 04:01:09] 2025-06-04 11:00:57,393 | INFO     | process IDs to be killed: [3561893] (in reverse order)
[2025-06-04 04:01:09] 2025-06-04 11:00:57,469 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:01:09] 2025-06-04 11:00:57,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:01:09] 2025-06-04 11:00:57,477 | INFO     | did not find any defunct processes belonging to 3561893
[2025-06-04 04:01:09] 2025-06-04 11:00:57,484 | INFO     | did not find any defunct processes belonging to 3561893
[2025-06-04 04:01:09] 2025-06-04 11:00:57,485 | INFO     | ready for new job
[2025-06-04 04:01:09] 2025-06-04 11:00:57,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:01:09] 2025-06-04 11:00:57,486 | INFO     | **************************************
[2025-06-04 04:01:09] 2025-06-04 11:00:57,487 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:01:09] 2025-06-04 11:00:57,487 | INFO     | **************************************
[2025-06-04 04:01:09] 2025-06-04 11:00:57,487 | INFO     | 
[2025-06-04 04:01:09] 2025-06-04 11:00:57,489 | INFO     | architecture information:
[2025-06-04 04:01:09] 2025-06-04 11:00:57,489 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:01:09] 2025-06-04 11:00:57,506 | INFO     | cat /etc/os-release:
[2025-06-04 04:01:09] NAME="CentOS Linux"
[2025-06-04 04:01:09] VERSION="7 (Core)"
[2025-06-04 04:01:09] ID="centos"
[2025-06-04 04:01:09] ID_LIKE="rhel fedora"
[2025-06-04 04:01:09] VERSION_ID="7"
[2025-06-04 04:01:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:01:09] ANSI_COLOR="0;31"
[2025-06-04 04:01:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:01:09] HOME_URL="https://www.centos.org/"
[2025-06-04 04:01:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:01:09] 
[2025-06-04 04:01:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:01:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:01:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:01:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:01:09] 
[2025-06-04 04:01:09] 2025-06-04 11:00:57,507 | INFO     | **************************************
[2025-06-04 04:01:09] 2025-06-04 11:00:58,010 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 04:01:09] 2025-06-04 11:00:58,029 | INFO     | sufficient remaining disk space (1996657524736 B)
[2025-06-04 04:01:09] 2025-06-04 11:00:58,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:01:09] 2025-06-04 11:00:58,030 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:01:09] 2025-06-04 11:00:58,030 | INFO     | update_server=False
[2025-06-04 04:01:09] 2025-06-04 11:00:58,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:01:09] 2025-06-04 11:00:58,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:01:09] 2025-06-04 11:00:58,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:01:09] 2025-06-04 11:00:58,191 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 04:01:09] 2025-06-04 11:00:58,192 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 04:01:09] 2025-06-04 11:00:58,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:01:09] 2025-06-04 11:00:58,192 | INFO     | will abort loop
[2025-06-04 04:01:09] 2025-06-04 11:00:58,407 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:01:09] 2025-06-04 11:00:58,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:01:09] 2025-06-04 11:00:58,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:01:09] 2025-06-04 11:00:58,482 | INFO     | all data control threads have been joined
[2025-06-04 04:01:09] 2025-06-04 11:00:58,937 | INFO     | all payload control threads have been joined
[2025-06-04 04:01:09] 2025-06-04 11:00:59,036 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,038 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,063 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,197 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,488 | INFO     | [data] control thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,565 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,662 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,737 | INFO     | all job control threads have been joined
[2025-06-04 04:01:09] 2025-06-04 11:00:59,814 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:00:59,942 | INFO     | [payload] control thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:00,036 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:00,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:00,232 | INFO     | [job] validate thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:00,427 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:00,742 | INFO     | [job] control thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:00,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:01:09] 2025-06-04 11:01:01,832 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:02,033 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:01:09] 2025-06-04 11:01:03,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949340370752)>', '<ExcThread(monitor, started 139948808197888)>']
[2025-06-04 04:01:09] 2025-06-04 11:01:04,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:01:09] 2025-06-04 11:01:04,437 | INFO     | [monitor] control thread has ended
[2025-06-04 04:01:09] 2025-06-04 11:01:08,991 | INFO     | all workflow threads have been joined
[2025-06-04 04:01:09] 2025-06-04 11:01:08,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:01:09] 2025-06-04 11:01:08,992 | INFO     | traces error code: 0
[2025-06-04 04:01:09] 2025-06-04 11:01:08,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:01:09] 2025-06-04 11:01:09,113 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:01:09] 2025-06-04 11:01:09,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:01:09] 2025-06-04 11:01:09,121 [wrapper] pilotpid: 3555590
[2025-06-04 04:01:09] 2025-06-04 11:01:09,125 [wrapper] Pilot exit status: 0
[2025-06-04 04:01:09] 2025-06-04 11:01:09,139 [wrapper] pandaids: 6679173610
[2025-06-04 04:01:09] 2025-06-04 11:01:09,196 [wrapper] cleanup supervisor_pilot 3555596 3555591
[2025-06-04 04:01:09] 2025-06-04 11:01:09,200 [wrapper] Test setup, not cleaning
[2025-06-04 04:01:09] 2025-06-04 11:01:09,205 [wrapper] apfmon messages muted
[2025-06-04 04:01:09] 2025-06-04 11:01:09,209 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:01:09] 2025-06-04 11:01:09,213 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:01:09]  *** Error codes and diagnostics ***
[2025-06-04 04:01:09]     "exeErrorCode": 65,
[2025-06-04 04:01:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:01:09]     "pilotErrorCode": 1305,
[2025-06-04 04:01:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:01:09]  *** Listing of results directory ***
[2025-06-04 04:01:09] total 215596
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:46 pilot3.tar.gz
[2025-06-04 04:01:09] -rwx------. 1 boinc boinc     37140 Jun  4 01:51 runpilot2-wrapper.sh
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:51 queuedata.json
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:01:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:57 run_atlas
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:57 job.xml
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc      6597 Jun  4 03:57 init_data.xml
[2025-06-04 04:01:09] -rw-r--r--. 2 boinc boinc 216741230 Jun  4 03:57 EVNT.45006593._000709.pool.root.1
[2025-06-04 04:01:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:57 start_atlas.sh
[2025-06-04 04:01:09] drwxrwx--x. 2 boinc boinc      4096 Jun  4 03:57 shared
[2025-06-04 04:01:09] -rw-r--r--. 2 boinc boinc    508875 Jun  4 03:57 input.tar.gz
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:57 boinc_lockfile
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc      2524 Jun  4 03:57 pandaJob.out
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc    986812 Jun  4 03:58 agis_schedconf.cvmfs.json
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc   1603667 Jun  4 03:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:01:09] drwx------. 4 boinc boinc      4096 Jun  4 03:58 pilot3
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc       521 Jun  4 03:58 boinc_task_state.xml
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc       956 Jun  4 03:58 memory_monitor_summary.json
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc     20610 Jun  4 03:58 log.45006595._055946.job.log.tgz.1
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc        95 Jun  4 04:00 pilot_heartbeat.json
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc      8350 Jun  4 04:00 heartbeat.json
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:01 boinc_mmap_file
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc        22 Jun  4 04:01 wrapper_checkpoint.txt
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc      4538 Jun  4 04:01 pilotlog.txt
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc     74101 Jun  4 04:01 log.45006595._055946.job.log.1
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc       188 Jun  4 04:01 output.list
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:01 runtime_log
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc    112640 Jun  4 04:01 result.tar.gz
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc      8484 Jun  4 04:01 runtime_log.err
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc       644 Jun  4 04:01 qbIMDmT1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcqnKDmMjD5Wo.diag
[2025-06-04 04:01:09] -rw-r--r--. 1 boinc boinc     21449 Jun  4 04:01 stderr.txt
[2025-06-04 04:01:09] No HITS result produced
[2025-06-04 04:01:09]  *** Contents of shared directory: ***
[2025-06-04 04:01:09] total 212296
[2025-06-04 04:01:09] -rw-r--r--. 2 boinc boinc 216741230 Jun  4 03:57 ATLAS.root_0
[2025-06-04 04:01:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:57 start_atlas.sh
[2025-06-04 04:01:09] -rw-r--r--. 2 boinc boinc    508875 Jun  4 03:57 input.tar.gz
[2025-06-04 04:01:09] -rw-------. 1 boinc boinc    112640 Jun  4 04:01 result.tar.gz
04:01:10 (3551759): run_atlas exited; CPU time 26.233845
04:01:10 (3551759): called boinc_finish(0)

</stderr_txt>
]]>

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