Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:04 (11922): wrapper (7.7.26015): starting
21:41:04 (11922): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:41:04] Arguments: --nthreads 8
[2025-06-04 21:41:04] Threads: 8
[2025-06-04 21:41:04] Checking for CVMFS
[2025-06-04 21:41:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:41:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:41:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:41:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:41:07] 2.11.2.0 16729 33753 88244 146792 2 159 17825302 25165825 3632 130560 0 17467188 99.829 19878679 2645 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:41:07] CVMFS is ok
[2025-06-04 21:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:41:07] Checking for apptainer binary...
[2025-06-04 21:41:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:41:07] Running /usr/bin/apptainer --version
[2025-06-04 21:41:07] apptainer version 1.3.2-1.el7
[2025-06-04 21:41:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:41:19] cg-vwn332.simple-grid.lan
[2025-06-04 21:41:19] apptainer works
[2025-06-04 21:41:19] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:41:19] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:41:19] Starting ATLAS job with PandaID=6678363823
[2025-06-04 21:41:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:29:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:29:26] 2025-06-04 23:29:12,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:29:26] 2025-06-04 23:29:12,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:29:26] 2025-06-04 23:29:12,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:29:26] 2025-06-04 23:29:12,327 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:29:26] 2025-06-04 23:29:12,328 | INFO     | sum of square deviations: 3438620752.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,330 | INFO     | sum of deviations: -10091390490.999994
[2025-06-05 01:29:26] 2025-06-04 23:29:12,330 | INFO     | mean x: 1749072929.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,330 | INFO     | mean y: 2489990.390134529
[2025-06-05 01:29:26] 2025-06-04 23:29:12,330 | INFO     | -- intersect: 5135530007.527828
[2025-06-05 01:29:26] 2025-06-04 23:29:12,330 | INFO     | intersect: 5135530007.527828
[2025-06-05 01:29:26] 2025-06-04 23:29:12,331 | INFO     | chi2: 2.630571342553277
[2025-06-05 01:29:26] 2025-06-04 23:29:12,331 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 01:29:26] 2025-06-04 23:29:12,333 | INFO     | sum of deviations: 5167668710.500001
[2025-06-05 01:29:26] 2025-06-04 23:29:12,333 | INFO     | mean x: 1749072776.5
[2025-06-05 01:29:26] 2025-06-04 23:29:12,334 | INFO     | mean y: 2500095.481651376
[2025-06-05 01:29:26] 2025-06-04 23:29:12,334 | INFO     | -- intersect: -2811109121.8977003
[2025-06-05 01:29:26] 2025-06-04 23:29:12,334 | INFO     | intersect: -2811109121.8977003
[2025-06-05 01:29:26] 2025-06-04 23:29:12,334 | INFO     | chi2: 1.8289581096607652
[2025-06-05 01:29:26] 2025-06-04 23:29:12,334 | INFO     | current chi2=1.8289581096607652 (change=30.472970640456094 %)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,335 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,337 | INFO     | sum of deviations: 5125426362.9999895
[2025-06-05 01:29:26] 2025-06-04 23:29:12,337 | INFO     | mean x: 1749072624.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,337 | INFO     | mean y: 2500065.6901408453
[2025-06-05 01:29:26] 2025-06-04 23:29:12,337 | INFO     | -- intersect: -2989283547.3727813
[2025-06-05 01:29:26] 2025-06-04 23:29:12,337 | INFO     | intersect: -2989283547.3727813
[2025-06-05 01:29:26] 2025-06-04 23:29:12,338 | INFO     | chi2: 1.8295002385003434
[2025-06-05 01:29:26] 2025-06-04 23:29:12,338 | INFO     | current chi2=1.8295002385003434 (change=-0.029641402759012003 %)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,338 | INFO     | right removable region: 212
[2025-06-05 01:29:26] 2025-06-04 23:29:12,338 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 01:29:26] 2025-06-04 23:29:12,340 | INFO     | sum of deviations: -48221774229.000015
[2025-06-05 01:29:26] 2025-06-04 23:29:12,340 | INFO     | mean x: 1749073081.5
[2025-06-05 01:29:26] 2025-06-04 23:29:12,340 | INFO     | mean y: 2515478.743119266
[2025-06-05 01:29:26] 2025-06-04 23:29:12,340 | INFO     | -- intersect: 26257536787.009468
[2025-06-05 01:29:26] 2025-06-04 23:29:12,341 | INFO     | intersect: 26257536787.009468
[2025-06-05 01:29:26] 2025-06-04 23:29:12,341 | INFO     | chi2: 1.0115725973191037
[2025-06-05 01:29:26] 2025-06-04 23:29:12,341 | INFO     | current chi2=1.0115725973191037 (change=61.54551747160546 %)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,342 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,343 | INFO     | sum of deviations: -43791157203.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,344 | INFO     | mean x: 1749073234.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,344 | INFO     | mean y: 2512322.276995305
[2025-06-05 01:29:26] 2025-06-04 23:29:12,344 | INFO     | -- intersect: 25564036950.668648
[2025-06-05 01:29:26] 2025-06-04 23:29:12,344 | INFO     | intersect: 25564036950.668648
[2025-06-05 01:29:26] 2025-06-04 23:29:12,344 | INFO     | chi2: 0.9990125505753085
[2025-06-05 01:29:26] 2025-06-04 23:29:12,344 | INFO     | current chi2=0.9990125505753085 (change=1.2416357241271807 %)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,345 | INFO     | left removable region: 20
[2025-06-05 01:29:26] 2025-06-04 23:29:12,345 | INFO     | sum of square deviations: 2194675568.0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,347 | INFO     | sum of deviations: -13759102873.499998
[2025-06-05 01:29:26] 2025-06-04 23:29:12,347 | INFO     | mean x: 1749073203.5
[2025-06-05 01:29:26] 2025-06-04 23:29:12,347 | INFO     | mean y: 2512363.2239583335
[2025-06-05 01:29:26] 2025-06-04 23:29:12,347 | INFO     | -- intersect: 10967995595.066587
[2025-06-05 01:29:26] 2025-06-04 23:29:12,347 | INFO     | intersect: 10967995595.066587
[2025-06-05 01:29:26] 2025-06-04 23:29:12,348 | INFO     | chi2: 0.12271292624038735
[2025-06-05 01:29:26] 2025-06-04 23:29:12,348 | INFO     | -- intersect: 10967995595.066587
[2025-06-05 01:29:26] 2025-06-04 23:29:12,348 | INFO     | current memory leak: -6.27 B/s (using 192 data points, chi2=0.12)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,349 | INFO     | ..............................
[2025-06-05 01:29:26] 2025-06-04 23:29:12,349 | INFO     | . Timing measurements:
[2025-06-05 01:29:26] 2025-06-04 23:29:12,349 | INFO     | . get job = 0 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,349 | INFO     | . initial setup = 3 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,349 | INFO     | . payload setup = 15 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,349 | INFO     | . stage-in = 0 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,349 | INFO     | . payload execution = 13593 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,350 | INFO     | . stage-out = 2 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,350 | INFO     | . log creation = 0 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,350 | INFO     | ..............................
[2025-06-05 01:29:26] 2025-06-04 23:29:12,492 | INFO     | 
[2025-06-05 01:29:26] 2025-06-04 23:29:12,492 | INFO     | job summary report
[2025-06-05 01:29:26] 2025-06-04 23:29:12,492 | INFO     | --------------------------------------------------
[2025-06-05 01:29:26] 2025-06-04 23:29:12,492 | INFO     | PanDA job id: 6678363823
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | task id: 45006595
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | errors: (none)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | pilot state: finished 
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | transexitcode: 0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | exeerrorcode: 0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | exeerrordiag: 
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | exitcode: 0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | exitmsg: OK
[2025-06-05 01:29:26] 2025-06-04 23:29:12,493 | INFO     | cpuconsumptiontime: 50963 s
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | nevents: 400
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | neventsw: 0
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | pid: 24163
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | pgrp: 24163
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | corecount: 8
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | event service: False
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | sizes: {0: 2397343, 1: 2397343, 11: 2397605, 13613: 2427281, 13615: 2436224, 13616: 2436280, 13633: 2436578}
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | --------------------------------------------------
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | 
[2025-06-05 01:29:26] 2025-06-04 23:29:12,494 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-06-05 01:29:26] 2025-06-04 23:29:12,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,530 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:29:26] 2025-06-04 23:29:12,530 | INFO     | job 6678363823 has completed (purged errors)
[2025-06-05 01:29:26] 2025-06-04 23:29:12,531 | INFO     | overall cleanup function is called
[2025-06-05 01:29:26] 2025-06-04 23:29:13,540 | INFO     | --- collectZombieJob: --- 10, [24163]
[2025-06-05 01:29:26] 2025-06-04 23:29:13,540 | INFO     | zombie collector waiting for pid 24163
[2025-06-05 01:29:26] 2025-06-04 23:29:13,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:29:26] 2025-06-04 23:29:13,541 | INFO     | collected zombie processes
[2025-06-05 01:29:26] 2025-06-04 23:29:13,541 | INFO     | will attempt to kill all subprocesses of pid=24163
[2025-06-05 01:29:26] 2025-06-04 23:29:13,649 | INFO     | process IDs to be killed: [24163] (in reverse order)
[2025-06-05 01:29:26] 2025-06-04 23:29:13,743 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:29:26] 2025-06-04 23:29:13,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:29:26] 2025-06-04 23:29:13,747 | INFO     | did not find any defunct processes belonging to 24163
[2025-06-05 01:29:26] 2025-06-04 23:29:13,750 | INFO     | did not find any defunct processes belonging to 24163
[2025-06-05 01:29:26] 2025-06-04 23:29:13,751 | INFO     | ready for new job
[2025-06-05 01:29:26] 2025-06-04 23:29:13,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:29:26] 2025-06-04 23:29:13,753 | INFO     | **************************************
[2025-06-05 01:29:26] 2025-06-04 23:29:13,753 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:29:26] 2025-06-04 23:29:13,754 | INFO     | **************************************
[2025-06-05 01:29:26] 2025-06-04 23:29:13,754 | INFO     | 
[2025-06-05 01:29:26] 2025-06-04 23:29:13,754 | INFO     | pilot is running in a VM
[2025-06-05 01:29:26] 2025-06-04 23:29:13,755 | INFO     | architecture information:
[2025-06-05 01:29:26] 2025-06-04 23:29:13,755 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:29:26] 2025-06-04 23:29:13,832 | INFO     | cat /etc/os-release:
[2025-06-05 01:29:26] NAME="CentOS Linux"
[2025-06-05 01:29:26] VERSION="7 (Core)"
[2025-06-05 01:29:26] ID="centos"
[2025-06-05 01:29:26] ID_LIKE="rhel fedora"
[2025-06-05 01:29:26] VERSION_ID="7"
[2025-06-05 01:29:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:29:26] ANSI_COLOR="0;31"
[2025-06-05 01:29:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:29:26] HOME_URL="https://www.centos.org/"
[2025-06-05 01:29:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:29:26] 
[2025-06-05 01:29:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:29:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:29:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:29:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:29:26] 
[2025-06-05 01:29:26] 2025-06-04 23:29:13,833 | INFO     | **************************************
[2025-06-05 01:29:26] 2025-06-04 23:29:13,946 | INFO     | PID=15611 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 01:29:26] 2025-06-04 23:29:13,946 | INFO     | .. there are 9 such processes running
[2025-06-05 01:29:26] 2025-06-04 23:29:14,335 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-06-05 01:29:26] 2025-06-04 23:29:14,414 | INFO     | sufficient remaining disk space (497408802816 B)
[2025-06-05 01:29:26] 2025-06-04 23:29:14,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:29:26] 2025-06-04 23:29:14,415 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:29:26] 2025-06-04 23:29:14,415 | INFO     | update_server=False
[2025-06-05 01:29:26] 2025-06-04 23:29:14,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:29:26] 2025-06-04 23:29:14,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:29:26] 2025-06-04 23:29:14,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:29:26] 2025-06-04 23:29:14,417 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:29:26] 2025-06-04 23:29:14,417 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:29:26] 2025-06-04 23:29:14,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:29:26] 2025-06-04 23:29:14,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:29:26] 2025-06-04 23:29:14,955 | INFO     | all payload control threads have been joined
[2025-06-05 01:29:26] 2025-06-04 23:29:15,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:29:26] 2025-06-04 23:29:15,267 | INFO     | all data control threads have been joined
[2025-06-05 01:29:26] 2025-06-04 23:29:15,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:29:26] 2025-06-04 23:29:15,329 | INFO     | aborting loop
[2025-06-05 01:29:26] 2025-06-04 23:29:15,423 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:15,424 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:15,612 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:15,960 | INFO     | [payload] control thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:15,981 | INFO     | all job control threads have been joined
[2025-06-05 01:29:26] 2025-06-04 23:29:16,114 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,212 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,214 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,215 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,222 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,272 | INFO     | [data] control thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,334 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,422 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,560 | INFO     | [job] validate thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:16,986 | INFO     | [job] control thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:19,163 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:29:26] 2025-06-04 23:29:20,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699536926528)>', '<ExcThread(monitor, started 140698967865088)>']
[2025-06-05 01:29:26] 2025-06-04 23:29:21,459 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:29:26] 2025-06-04 23:29:21,459 | INFO     | [monitor] control thread has ended
[2025-06-05 01:29:26] 2025-06-04 23:29:25,732 | INFO     | all workflow threads have been joined
[2025-06-05 01:29:26] 2025-06-04 23:29:25,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:29:26] 2025-06-04 23:29:25,733 | INFO     | traces error code: 0
[2025-06-05 01:29:26] 2025-06-04 23:29:25,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:29:26] 2025-06-04 23:29:26,001 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:29:26] 2025-06-04 23:29:26,081 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:29:26] 2025-06-04 23:29:26,085 [wrapper] pilotpid: 15611
[2025-06-05 01:29:26] 2025-06-04 23:29:26,088 [wrapper] Pilot exit status: 0
[2025-06-05 01:29:26] 2025-06-04 23:29:26,111 [wrapper] pandaids: 6678363823
[2025-06-05 01:29:26] 2025-06-04 23:29:26,153 [wrapper] cleanup supervisor_pilot 10562 15612
[2025-06-05 01:29:26] 2025-06-04 23:29:26,187 [wrapper] Test setup, not cleaning
[2025-06-05 01:29:26] 2025-06-04 23:29:26,241 [wrapper] apfmon messages muted
[2025-06-05 01:29:26] 2025-06-04 23:29:26,282 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:29:26] 2025-06-04 23:29:26,291 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:29:26]  *** Error codes and diagnostics ***
[2025-06-05 01:29:26]     "exeErrorCode": 0,
[2025-06-05 01:29:26]     "exeErrorDiag": "",
[2025-06-05 01:29:26]     "pilotErrorCode": 0,
[2025-06-05 01:29:26]     "pilotErrorDiag": "",
[2025-06-05 01:29:26]  *** Listing of results directory ***
[2025-06-05 01:29:26] total 387696
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-05 01:29:26] -rwx------. 1 boinc boinc     37140 Jun  4 07:55 runpilot2-wrapper.sh
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc      5111 Jun  4 07:55 queuedata.json
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:29:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:41 run_atlas
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:41 job.xml
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc      6391 Jun  4 21:41 init_data.xml
[2025-06-05 01:29:26] -rw-r--r--. 2 boinc boinc 214829038 Jun  4 21:41 EVNT.45006593._002149.pool.root.1
[2025-06-05 01:29:26] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:41 start_atlas.sh
[2025-06-05 01:29:26] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:41 shared
[2025-06-05 01:29:26] -rw-r--r--. 2 boinc boinc    508882 Jun  4 21:41 input.tar.gz
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:41 boinc_lockfile
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc      2525 Jun  4 21:41 pandaJob.out
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc    991007 Jun  4 21:41 agis_schedconf.cvmfs.json
[2025-06-05 01:29:26] drwx------. 4 boinc boinc      4096 Jun  4 21:41 pilot3
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc 175211705 Jun  5 01:28 HITS.45006595._053698.pool.root.1
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc       531 Jun  5 01:28 boinc_task_state.xml
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc      1018 Jun  5 01:28 memory_monitor_summary.json
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc        95 Jun  5 01:28 pilot_heartbeat.json
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc   1598969 Jun  5 01:28 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc    385376 Jun  5 01:28 log.45006595._053698.job.log.tgz.1
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc      7689 Jun  5 01:29 heartbeat.json
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc      8192 Jun  5 01:29 boinc_mmap_file
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc        28 Jun  5 01:29 wrapper_checkpoint.txt
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc      4933 Jun  5 01:29 pilotlog.txt
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc   1180402 Jun  5 01:29 log.45006595._053698.job.log.1
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc       357 Jun  5 01:29 output.list
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:29 runtime_log
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc   1587200 Jun  5 01:29 result.tar.gz
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc      8673 Jun  5 01:29 runtime_log.err
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc       657 Jun  5 01:29 4dwKDmiGwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZoaKDm4YCz4n.diag
[2025-06-05 01:29:26] -rw-r--r--. 1 boinc boinc     20591 Jun  5 01:29 stderr.txt
[2025-06-05 01:29:26] HITS file was successfully produced:
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc 175211705 Jun  5 01:28 shared/HITS.pool.root.1
[2025-06-05 01:29:26]  *** Contents of shared directory: ***
[2025-06-05 01:29:26] total 382972
[2025-06-05 01:29:26] -rw-r--r--. 2 boinc boinc 214829038 Jun  4 21:41 ATLAS.root_0
[2025-06-05 01:29:26] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:41 start_atlas.sh
[2025-06-05 01:29:26] -rw-r--r--. 2 boinc boinc    508882 Jun  4 21:41 input.tar.gz
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc 175211705 Jun  5 01:28 HITS.pool.root.1
[2025-06-05 01:29:26] -rw-------. 1 boinc boinc   1587200 Jun  5 01:29 result.tar.gz
01:29:27 (11922): run_atlas exited; CPU time 51144.169872
01:29:27 (11922): called boinc_finish(0)

</stderr_txt>
]]>

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