Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:46:59 (560182): wrapper (7.7.26015): starting
06:46:59 (560182): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:46:59] Arguments: --nthreads 8
[2025-06-04 06:46:59] Threads: 8
[2025-06-04 06:46:59] Checking for CVMFS
[2025-06-04 06:46:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:46:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:46:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:46:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:46:59] 2.12.6.0 844411 23163 548204 146777 3 678 32872315 32935937 12618 16776704 0 114758739 99.642 109513207 27925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:46:59] CVMFS is ok
[2025-06-04 06:46:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:46:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:46:59] Further information can be found at the LHC@home message board.
[2025-06-04 06:46:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:46:59] Checking for apptainer binary...
[2025-06-04 06:46:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:46:59] Running /usr/bin/apptainer --version
[2025-06-04 06:46:59] apptainer version 1.4.1-1.el9
[2025-06-04 06:46:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:46:59] c6-6-8-3.aglt2.org
[2025-06-04 06:46:59] apptainer works
[2025-06-04 06:46:59] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:46:59] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:46:59] Starting ATLAS job with PandaID=6678363844
[2025-06-04 06:46:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:45:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:45:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:45:33]  is_altstaged=None
[2025-06-04 07:45:33]  is_tar=False
[2025-06-04 07:45:33]  lfn=log.45006595._053719.job.log.tgz.1
[2025-06-04 07:45:33]  mtime=0
[2025-06-04 07:45:33]  protocol_id=None
[2025-06-04 07:45:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:45:33]  replicas=None
[2025-06-04 07:45:33]  scope=mc23_13p6TeV
[2025-06-04 07:45:33]  status=None
[2025-06-04 07:45:33]  status_code=0
[2025-06-04 07:45:33]  storage_token=
[2025-06-04 07:45:33]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678363844/log.45006595._053719.job.log.tgz.1
[2025-06-04 07:45:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/83/log.45006595._053719.job.log.tgz.1
[2025-06-04 07:45:33]  workdir=None
[2025-06-04 07:45:33] ]
[2025-06-04 07:45:33] 2025-06-04 11:45:10,108 | INFO     | transferring file log.45006595._053719.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678363844/log.45006595._053719.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:45:33] 2025-06-04 11:45:10,108 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678363844/log.45006595._053719.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._053719.job
[2025-06-04 07:45:33] 2025-06-04 11:45:10,128 | INFO     | adding to output.list: log.45006595._053719.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/83/log.45006595._053719.job.log.tg
[2025-06-04 07:45:33] 2025-06-04 11:45:10,128 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:45:33] 2025-06-04 11:45:10,129 | INFO     | summary of transferred files:
[2025-06-04 07:45:33] 2025-06-04 11:45:10,129 | INFO     |  -- lfn=log.45006595._053719.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:45:33] 2025-06-04 11:45:10,129 | INFO     | stage-out finished correctly
[2025-06-04 07:45:33] 2025-06-04 11:45:10,238 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:45:33] 2025-06-04 11:45:10,326 | INFO     | job 6678363844 has state=finished
[2025-06-04 07:45:33] 2025-06-04 11:45:10,327 | INFO     | preparing for final server update for job 6678363844 in state='finished'
[2025-06-04 07:45:33] 2025-06-04 11:45:10,327 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:45:33] 2025-06-04 11:45:10,327 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:45:33] 2025-06-04 11:45:10,327 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:45:33] 2025-06-04 11:45:10,328 | INFO     | job 6678363844 has finished - writing final server update
[2025-06-04 07:45:33] 2025-06-04 11:45:10,328 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:45:33] 2025-06-04 11:45:10,345 | INFO     | executing command: lscpu
[2025-06-04 07:45:33] 2025-06-04 11:45:10,433 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:45:33] 2025-06-04 11:45:11,857 | WARNING  | process 570468 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:45:33] 2025-06-04 11:45:11,857 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678363844/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:45:33] 2025-06-04 11:45:12,170 | INFO     | number of running child processes to parent process 570468: 1
[2025-06-04 07:45:33] 2025-06-04 11:45:12,171 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:45:33] 2025-06-04 11:45:13,551 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:45:33] 2025-06-04 11:45:13,551 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678363844/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:45:33] 2025-06-04 11:45:13,552 | INFO     | extracted standard info from prmon json
[2025-06-04 07:45:33] 2025-06-04 11:45:13,552 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:45:33] 2025-06-04 11:45:13,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:45:33] 2025-06-04 11:45:13,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:45:33] 2025-06-04 11:45:13,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:45:33] 2025-06-04 11:45:13,554 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:45:33] 2025-06-04 11:45:13,554 | INFO     | sum of square deviations: 38744912.5
[2025-06-04 07:45:33] 2025-06-04 11:45:13,554 | INFO     | sum of deviations: 4468035249.5
[2025-06-04 07:45:33] 2025-06-04 11:45:13,554 | INFO     | mean x: 1749035848.5
[2025-06-04 07:45:33] 2025-06-04 11:45:13,554 | INFO     | mean y: 2162809.38
[2025-06-04 07:45:33] 2025-06-04 11:45:13,554 | INFO     | -- intersect: -201695384545.69897
[2025-06-04 07:45:33] 2025-06-04 11:45:13,554 | INFO     | intersect: -201695384545.69897
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | chi2: 0.6975202813108063
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | -- intersect: -201695384545.69897
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | current memory leak: 115.32 B/s (using 50 data points, chi2=0.70)
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | ..............................
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | . Timing measurements:
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | . get job = 0 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | . initial setup = 2 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,555 | INFO     | . payload setup = 4 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,556 | INFO     | . stage-in = 0 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,556 | INFO     | . payload execution = 3459 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,556 | INFO     | . stage-out = 0 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,556 | INFO     | . log creation = 0 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,556 | INFO     | ..............................
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | 
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | job summary report
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | --------------------------------------------------
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | PanDA job id: 6678363844
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | task id: 45006595
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | errors: (none)
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | pilot state: finished 
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | transexitcode: 0
[2025-06-04 07:45:33] 2025-06-04 11:45:13,641 | INFO     | exeerrorcode: 0
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | exeerrordiag: 
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | exitcode: 0
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | exitmsg: OK
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | cpuconsumptiontime: 22649 s
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | nevents: 400
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | neventsw: 0
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | pid: 570468
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | pgrp: 570468
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | corecount: 8
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | event service: False
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 3467: 2431016, 3468: 2440013, 3472: 2440127}
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | --------------------------------------------------
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | 
[2025-06-04 07:45:33] 2025-06-04 11:45:13,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,662 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:45:33] 2025-06-04 11:45:13,663 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,663 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:45:33] 2025-06-04 11:45:13,663 | INFO     | job 6678363844 has completed (purged errors)
[2025-06-04 07:45:33] 2025-06-04 11:45:13,663 | INFO     | overall cleanup function is called
[2025-06-04 07:45:33] 2025-06-04 11:45:14,669 | INFO     | --- collectZombieJob: --- 10, [570468]
[2025-06-04 07:45:33] 2025-06-04 11:45:14,670 | INFO     | zombie collector waiting for pid 570468
[2025-06-04 07:45:33] 2025-06-04 11:45:14,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:45:33] 2025-06-04 11:45:14,670 | INFO     | collected zombie processes
[2025-06-04 07:45:33] 2025-06-04 11:45:14,670 | INFO     | will attempt to kill all subprocesses of pid=570468
[2025-06-04 07:45:33] 2025-06-04 11:45:15,584 | INFO     | PID=563921 has CPU usage=15.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:45:33] 2025-06-04 11:45:15,584 | INFO     | .. there are 21 such processes running
[2025-06-04 07:45:33] 2025-06-04 11:45:15,591 | INFO     | process IDs to be killed: [570468] (in reverse order)
[2025-06-04 07:45:33] 2025-06-04 11:45:15,659 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:45:33] 2025-06-04 11:45:15,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:45:33] 2025-06-04 11:45:15,673 | INFO     | did not find any defunct processes belonging to 570468
[2025-06-04 07:45:33] 2025-06-04 11:45:15,686 | INFO     | did not find any defunct processes belonging to 570468
[2025-06-04 07:45:33] 2025-06-04 11:45:15,687 | INFO     | ready for new job
[2025-06-04 07:45:33] 2025-06-04 11:45:15,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:45:33] 2025-06-04 11:45:15,689 | INFO     | **************************************
[2025-06-04 07:45:33] 2025-06-04 11:45:15,689 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:45:33] 2025-06-04 11:45:15,689 | INFO     | **************************************
[2025-06-04 07:45:33] 2025-06-04 11:45:15,689 | INFO     | 
[2025-06-04 07:45:33] 2025-06-04 11:45:15,706 | INFO     | architecture information:
[2025-06-04 07:45:33] 2025-06-04 11:45:15,707 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:45:33] 2025-06-04 11:45:15,720 | INFO     | cat /etc/os-release:
[2025-06-04 07:45:33] NAME="CentOS Linux"
[2025-06-04 07:45:33] VERSION="7 (Core)"
[2025-06-04 07:45:33] ID="centos"
[2025-06-04 07:45:33] ID_LIKE="rhel fedora"
[2025-06-04 07:45:33] VERSION_ID="7"
[2025-06-04 07:45:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:45:33] ANSI_COLOR="0;31"
[2025-06-04 07:45:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:45:33] HOME_URL="https://www.centos.org/"
[2025-06-04 07:45:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:45:33] 
[2025-06-04 07:45:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:45:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:45:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:45:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:45:33] 
[2025-06-04 07:45:33] 2025-06-04 11:45:15,720 | INFO     | **************************************
[2025-06-04 07:45:33] 2025-06-04 11:45:16,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 07:45:33] 2025-06-04 11:45:16,241 | INFO     | sufficient remaining disk space (95606013952 B)
[2025-06-04 07:45:33] 2025-06-04 11:45:16,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:45:33] 2025-06-04 11:45:16,241 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:45:33] 2025-06-04 11:45:16,242 | INFO     | update_server=False
[2025-06-04 07:45:33] 2025-06-04 11:45:16,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:45:33] 2025-06-04 11:45:16,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:45:33] 2025-06-04 11:45:16,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:45:33] 2025-06-04 11:45:16,243 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:45:33] 2025-06-04 11:45:16,243 | INFO     | aborting loop
[2025-06-04 07:45:33] 2025-06-04 11:45:16,243 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:45:33] 2025-06-04 11:45:16,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:45:33] 2025-06-04 11:45:16,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:45:33] 2025-06-04 11:45:16,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:45:33] 2025-06-04 11:45:16,564 | INFO     | all data control threads have been joined
[2025-06-04 07:45:33] 2025-06-04 11:45:17,053 | INFO     | all payload control threads have been joined
[2025-06-04 07:45:33] 2025-06-04 11:45:17,247 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:17,248 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:17,249 | INFO     | all job control threads have been joined
[2025-06-04 07:45:33] 2025-06-04 11:45:17,520 | INFO     | [job] validate thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:17,536 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:17,567 | INFO     | [data] control thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:17,612 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:17,659 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:17,752 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:18,031 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:18,058 | INFO     | [payload] control thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:18,211 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:18,248 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:18,255 | INFO     | [job] control thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:18,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:45:33] 2025-06-04 11:45:19,657 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:20,338 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:26,682 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:45:33] 2025-06-04 11:45:27,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:45:33] 2025-06-04 11:45:28,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140576113653568)>', '<ExcThread(monitor, started 140575470769920)>']
[2025-06-04 07:45:33] 2025-06-04 11:45:29,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:45:33] 2025-06-04 11:45:29,301 | INFO     | [monitor] control thread has ended
[2025-06-04 07:45:33] 2025-06-04 11:45:33,356 | INFO     | all workflow threads have been joined
[2025-06-04 07:45:33] 2025-06-04 11:45:33,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:45:33] 2025-06-04 11:45:33,357 | INFO     | traces error code: 0
[2025-06-04 07:45:33] 2025-06-04 11:45:33,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:45:33] 2025-06-04 11:45:33,500 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:45:33] 2025-06-04 11:45:33,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:45:33] 2025-06-04 11:45:33,503 [wrapper] pilotpid: 563921
[2025-06-04 07:45:33] 2025-06-04 11:45:33,504 [wrapper] Pilot exit status: 0
[2025-06-04 07:45:33] 2025-06-04 11:45:33,511 [wrapper] pandaids: 6678363844
[2025-06-04 07:45:33] 2025-06-04 11:45:33,579 [wrapper] cleanup supervisor_pilot  712789 563922
[2025-06-04 07:45:33] 2025-06-04 11:45:33,582 [wrapper] Test setup, not cleaning
[2025-06-04 07:45:33] 2025-06-04 11:45:33,585 [wrapper] apfmon messages muted
[2025-06-04 07:45:33] 2025-06-04 11:45:33,587 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:45:33] 2025-06-04 11:45:33,590 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:45:33]  *** Error codes and diagnostics ***
[2025-06-04 07:45:33]     "exeErrorCode": 0,
[2025-06-04 07:45:33]     "exeErrorDiag": "",
[2025-06-04 07:45:33]     "pilotErrorCode": 0,
[2025-06-04 07:45:33]     "pilotErrorDiag": "",
[2025-06-04 07:45:33]  *** Listing of results directory ***
[2025-06-04 07:45:33] total 393508
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:45:33] -rwx------. 1 boincer umatlas     37140 Jun  4 01:55 runpilot2-wrapper.sh
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:55 queuedata.json
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:45:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:46 run_atlas
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:46 job.xml
[2025-06-04 07:45:33] -rw-r--r--. 2 boincer umatlas 218048813 Jun  4 06:46 EVNT.45006593._002150.pool.root.1
[2025-06-04 07:45:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:46 start_atlas.sh
[2025-06-04 07:45:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:46 shared
[2025-06-04 07:45:33] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 06:46 input.tar.gz
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:46 boinc_lockfile
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:46 pandaJob.out
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas    986812 Jun  4 06:47 agis_schedconf.cvmfs.json
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:45:33] drwx------. 4 boincer umatlas      4096 Jun  4 06:47 pilot3
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas      6857 Jun  4 07:40 init_data.xml
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas        95 Jun  4 07:44 pilot_heartbeat.json
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas 179788735 Jun  4 07:44 HITS.45006595._053719.pool.root.1
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:44 boinc_task_state.xml
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas      1032 Jun  4 07:45 memory_monitor_summary.json
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas    287777 Jun  4 07:45 log.45006595._053719.job.log.tgz.1
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas      7712 Jun  4 07:45 heartbeat.json
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:45 wrapper_checkpoint.txt
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:45 boinc_mmap_file
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas      4548 Jun  4 07:45 pilotlog.txt
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas    353141 Jun  4 07:45 log.45006595._053719.job.log.1
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas       357 Jun  4 07:45 output.list
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:45 runtime_log
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas    655360 Jun  4 07:45 result.tar.gz
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 07:45 runtime_log.err
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas       651 Jun  4 07:45 7qILDmiGwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqoaKDmaUOvJn.diag
[2025-06-04 07:45:33] -rw-r--r--. 1 boincer umatlas     21398 Jun  4 07:45 stderr.txt
[2025-06-04 07:45:33] HITS file was successfully produced:
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas 179788735 Jun  4 07:44 shared/HITS.pool.root.1
[2025-06-04 07:45:33]  *** Contents of shared directory: ***
[2025-06-04 07:45:33] total 389680
[2025-06-04 07:45:33] -rw-r--r--. 2 boincer umatlas 218048813 Jun  4 06:46 ATLAS.root_0
[2025-06-04 07:45:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:46 start_atlas.sh
[2025-06-04 07:45:33] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 06:46 input.tar.gz
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas 179788735 Jun  4 07:44 HITS.pool.root.1
[2025-06-04 07:45:33] -rw-------. 1 boincer umatlas    655360 Jun  4 07:45 result.tar.gz
07:45:35 (560182): run_atlas exited; CPU time 22782.127684
07:45:35 (560182): called boinc_finish(0)

</stderr_txt>
]]>

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