Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:50:57 (2427375): wrapper (7.7.26015): starting
06:50:57 (2427375): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:50:57] Arguments: --nthreads 8
[2025-06-04 06:50:57] Threads: 8
[2025-06-04 06:50:57] Checking for CVMFS
[2025-06-04 06:50:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:50:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:50:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:50:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:50:57] 2.12.6.0 8406 37215 421600 146777 1 422 26408195 32935937 9663 16776704 1 319469833 99.647 287095285 22733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:50:57] CVMFS is ok
[2025-06-04 06:50:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:50:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:50:57] Further information can be found at the LHC@home message board.
[2025-06-04 06:50:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:50:57] Checking for apptainer binary...
[2025-06-04 06:50:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:50:57] Running /usr/bin/apptainer --version
[2025-06-04 06:50:57] apptainer version 1.4.1-1.el9
[2025-06-04 06:50:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:50:57] c7-16-9.aglt2.org
[2025-06-04 06:50:57] apptainer works
[2025-06-04 06:50:57] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:50:57] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:50:57] Starting ATLAS job with PandaID=6678363843
[2025-06-04 06:50:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:41:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:41:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:41:15]  is_altstaged=None
[2025-06-04 07:41:15]  is_tar=False
[2025-06-04 07:41:15]  lfn=log.45006595._053718.job.log.tgz.1
[2025-06-04 07:41:15]  mtime=0
[2025-06-04 07:41:15]  protocol_id=None
[2025-06-04 07:41:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:41:15]  replicas=None
[2025-06-04 07:41:15]  scope=mc23_13p6TeV
[2025-06-04 07:41:15]  status=None
[2025-06-04 07:41:15]  status_code=0
[2025-06-04 07:41:15]  storage_token=
[2025-06-04 07:41:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678363843/log.45006595._053718.job.log.tgz.1
[2025-06-04 07:41:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/55/log.45006595._053718.job.log.tgz.1
[2025-06-04 07:41:15]  workdir=None
[2025-06-04 07:41:15] ]
[2025-06-04 07:41:15] 2025-06-04 11:40:52,964 | INFO     | transferring file log.45006595._053718.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678363843/log.45006595._053718.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:41:15] 2025-06-04 11:40:52,964 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678363843/log.45006595._053718.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053718.job
[2025-06-04 07:41:15] 2025-06-04 11:40:52,975 | INFO     | monitor loop #222: job 0:6678363843 is in state 'stageout'
[2025-06-04 07:41:15] 2025-06-04 11:40:52,975 | WARNING  | aborting job monitor tasks since payload process 2440320 is not running
[2025-06-04 07:41:15] 2025-06-04 11:40:52,980 | INFO     | adding to output.list: log.45006595._053718.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/55/log.45006595._053718.job.log.tg
[2025-06-04 07:41:15] 2025-06-04 11:40:52,981 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:41:15] 2025-06-04 11:40:52,981 | INFO     | summary of transferred files:
[2025-06-04 07:41:15] 2025-06-04 11:40:52,981 | INFO     |  -- lfn=log.45006595._053718.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:41:15] 2025-06-04 11:40:52,981 | INFO     | stage-out finished correctly
[2025-06-04 07:41:15] 2025-06-04 11:40:53,497 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:41:15] 2025-06-04 11:40:55,475 | INFO     | monitor loop #223: job 0:6678363843 is in state 'finished'
[2025-06-04 07:41:15] 2025-06-04 11:40:55,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:41:15] 2025-06-04 11:40:55,965 | INFO     | job 6678363843 has state=finished
[2025-06-04 07:41:15] 2025-06-04 11:40:55,965 | INFO     | preparing for final server update for job 6678363843 in state='finished'
[2025-06-04 07:41:15] 2025-06-04 11:40:55,966 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:41:15] 2025-06-04 11:40:55,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:41:15] 2025-06-04 11:40:55,966 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:41:15] 2025-06-04 11:40:55,966 | INFO     | job 6678363843 has finished - writing final server update
[2025-06-04 07:41:15] 2025-06-04 11:40:55,967 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:41:15] 2025-06-04 11:40:55,985 | INFO     | executing command: lscpu
[2025-06-04 07:41:15] 2025-06-04 11:40:56,035 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:41:15] 2025-06-04 11:40:57,978 | INFO     | monitor loop #224: job 0:6678363843 is in state 'finished'
[2025-06-04 07:41:15] 2025-06-04 11:40:57,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:41:15] 2025-06-04 11:40:58,137 | INFO     | PID=2432558 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 07:41:15] 2025-06-04 11:40:58,138 | INFO     | .. there are 15 such processes running
[2025-06-04 07:41:15] 2025-06-04 11:40:58,989 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:41:15] 2025-06-04 11:40:58,989 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678363843/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:41:15] 2025-06-04 11:40:58,990 | INFO     | extracted standard info from prmon json
[2025-06-04 07:41:15] 2025-06-04 11:40:58,990 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:41:15] 2025-06-04 11:40:58,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:41:15] 2025-06-04 11:40:58,990 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:41:15] 2025-06-04 11:40:58,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:41:15] 2025-06-04 11:40:58,991 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | sum of square deviations: 22960430.5
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | sum of deviations: 3488738870.5
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | mean x: 1749035845.5
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | mean y: 2127793.3095238097
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | -- intersect: -265756362235.5984
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | intersect: -265756362235.5984
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | chi2: 0.7561374316768186
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | -- intersect: -265756362235.5984
[2025-06-04 07:41:15] 2025-06-04 11:40:58,992 | INFO     | current memory leak: 151.95 B/s (using 42 data points, chi2=0.76)
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | ..............................
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . Timing measurements:
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . get job = 0 s
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . initial setup = 2 s
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . payload setup = 5 s
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . stage-in = 0 s
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . payload execution = 2962 s
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . stage-out = 0 s
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | . log creation = 0 s
[2025-06-04 07:41:15] 2025-06-04 11:40:58,993 | INFO     | ..............................
[2025-06-04 07:41:15] 2025-06-04 11:40:59,380 | INFO     | 
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | job summary report
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | --------------------------------------------------
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | PanDA job id: 6678363843
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | task id: 45006595
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | errors: (none)
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | pilot state: finished 
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | transexitcode: 0
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | exeerrorcode: 0
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | exeerrordiag: 
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | exitcode: 0
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | exitmsg: OK
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | cpuconsumptiontime: 18927 s
[2025-06-04 07:41:15] 2025-06-04 11:40:59,381 | INFO     | nevents: 400
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | neventsw: 0
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | pid: 2440320
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | pgrp: 2440320
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | corecount: 8
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | event service: False
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 2970: 2430785, 2971: 2430784, 2972: 2439965, 2978: 2440079}
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | --------------------------------------------------
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | 
[2025-06-04 07:41:15] 2025-06-04 11:40:59,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | job 6678363843 has completed (purged errors)
[2025-06-04 07:41:15] 2025-06-04 11:40:59,398 | INFO     | overall cleanup function is called
[2025-06-04 07:41:15] 2025-06-04 11:41:00,406 | INFO     | --- collectZombieJob: --- 10, [2440320]
[2025-06-04 07:41:15] 2025-06-04 11:41:00,406 | INFO     | zombie collector waiting for pid 2440320
[2025-06-04 07:41:15] 2025-06-04 11:41:00,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:41:15] 2025-06-04 11:41:00,407 | INFO     | collected zombie processes
[2025-06-04 07:41:15] 2025-06-04 11:41:00,407 | INFO     | will attempt to kill all subprocesses of pid=2440320
[2025-06-04 07:41:15] 2025-06-04 11:41:00,651 | INFO     | process IDs to be killed: [2440320] (in reverse order)
[2025-06-04 07:41:15] 2025-06-04 11:41:00,732 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:41:15] 2025-06-04 11:41:00,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:41:15] 2025-06-04 11:41:00,746 | INFO     | did not find any defunct processes belonging to 2440320
[2025-06-04 07:41:15] 2025-06-04 11:41:00,761 | INFO     | did not find any defunct processes belonging to 2440320
[2025-06-04 07:41:15] 2025-06-04 11:41:00,761 | INFO     | ready for new job
[2025-06-04 07:41:15] 2025-06-04 11:41:00,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:41:15] 2025-06-04 11:41:00,762 | INFO     | **************************************
[2025-06-04 07:41:15] 2025-06-04 11:41:00,762 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:41:15] 2025-06-04 11:41:00,763 | INFO     | **************************************
[2025-06-04 07:41:15] 2025-06-04 11:41:00,763 | INFO     | 
[2025-06-04 07:41:15] 2025-06-04 11:41:00,779 | INFO     | architecture information:
[2025-06-04 07:41:15] 2025-06-04 11:41:00,779 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:41:15] 2025-06-04 11:41:00,790 | INFO     | cat /etc/os-release:
[2025-06-04 07:41:15] NAME="CentOS Linux"
[2025-06-04 07:41:15] VERSION="7 (Core)"
[2025-06-04 07:41:15] ID="centos"
[2025-06-04 07:41:15] ID_LIKE="rhel fedora"
[2025-06-04 07:41:15] VERSION_ID="7"
[2025-06-04 07:41:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:41:15] ANSI_COLOR="0;31"
[2025-06-04 07:41:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:41:15] HOME_URL="https://www.centos.org/"
[2025-06-04 07:41:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:41:15] 
[2025-06-04 07:41:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:41:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:41:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:41:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:41:15] 
[2025-06-04 07:41:15] 2025-06-04 11:41:00,790 | INFO     | **************************************
[2025-06-04 07:41:15] 2025-06-04 11:41:01,293 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:41:15] 2025-06-04 11:41:01,305 | INFO     | sufficient remaining disk space (75581358080 B)
[2025-06-04 07:41:15] 2025-06-04 11:41:01,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:41:15] 2025-06-04 11:41:01,306 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:41:15] 2025-06-04 11:41:01,306 | INFO     | update_server=False
[2025-06-04 07:41:15] 2025-06-04 11:41:01,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:41:15] 2025-06-04 11:41:01,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:41:15] 2025-06-04 11:41:01,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:41:15] 2025-06-04 11:41:01,484 | INFO     | aborting loop
[2025-06-04 07:41:15] 2025-06-04 11:41:01,748 | INFO     | all job control threads have been joined
[2025-06-04 07:41:15] 2025-06-04 11:41:01,790 | INFO     | all data control threads have been joined
[2025-06-04 07:41:15] 2025-06-04 11:41:02,145 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:41:15] 2025-06-04 11:41:02,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:41:15] 2025-06-04 11:41:02,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:41:15] 2025-06-04 11:41:02,311 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,314 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,459 | INFO     | all payload control threads have been joined
[2025-06-04 07:41:15] 2025-06-04 11:41:02,489 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,555 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,709 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,752 | INFO     | [job] control thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,795 | INFO     | [data] control thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:02,832 | INFO     | [job] validate thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:03,007 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:03,058 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:03,185 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:03,311 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:03,464 | INFO     | [payload] control thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:04,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:41:15] 2025-06-04 11:41:04,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:41:15] 2025-06-04 11:41:05,070 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:08,050 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:41:15] 2025-06-04 11:41:10,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045791024960)>', '<ExcThread(monitor, started 140044916483840)>']
[2025-06-04 07:41:15] 2025-06-04 11:41:10,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:41:15] 2025-06-04 11:41:10,185 | INFO     | [monitor] control thread has ended
[2025-06-04 07:41:15] 2025-06-04 11:41:15,175 | INFO     | all workflow threads have been joined
[2025-06-04 07:41:15] 2025-06-04 11:41:15,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:41:15] 2025-06-04 11:41:15,175 | INFO     | traces error code: 0
[2025-06-04 07:41:15] 2025-06-04 11:41:15,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:41:15] 2025-06-04 11:41:15,284 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:41:15] 2025-06-04 11:41:15,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:41:15] 2025-06-04 11:41:15,289 [wrapper] pilotpid: 2432558
[2025-06-04 07:41:15] 2025-06-04 11:41:15,292 [wrapper] Pilot exit status: 0
[2025-06-04 07:41:15] 2025-06-04 11:41:15,301 [wrapper] pandaids: 6678363843
[2025-06-04 07:41:15] 2025-06-04 11:41:15,389 [wrapper] cleanup supervisor_pilot 2624994 2432560
[2025-06-04 07:41:15] 2025-06-04 11:41:15,392 [wrapper] Test setup, not cleaning
[2025-06-04 07:41:15] 2025-06-04 11:41:15,394 [wrapper] apfmon messages muted
[2025-06-04 07:41:15] 2025-06-04 11:41:15,397 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:41:15] 2025-06-04 11:41:15,400 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:41:15]  *** Error codes and diagnostics ***
[2025-06-04 07:41:15]     "exeErrorCode": 0,
[2025-06-04 07:41:15]     "exeErrorDiag": "",
[2025-06-04 07:41:15]     "pilotErrorCode": 0,
[2025-06-04 07:41:15]     "pilotErrorDiag": "",
[2025-06-04 07:41:15]  *** Listing of results directory ***
[2025-06-04 07:41:15] total 391420
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:41:15] -rwx------. 1 boincer umatlas     37140 Jun  4 01:55 runpilot2-wrapper.sh
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:55 queuedata.json
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:41:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:50 run_atlas
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:50 job.xml
[2025-06-04 07:41:15] -rw-r--r--. 2 boincer umatlas 218048813 Jun  4 06:50 EVNT.45006593._002150.pool.root.1
[2025-06-04 07:41:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:50 start_atlas.sh
[2025-06-04 07:41:15] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:50 shared
[2025-06-04 07:41:15] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 06:50 input.tar.gz
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:50 boinc_lockfile
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:50 pandaJob.out
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas    986812 Jun  4 06:51 agis_schedconf.cvmfs.json
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:41:15] drwx------. 4 boincer umatlas      4096 Jun  4 06:51 pilot3
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 07:36 init_data.xml
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas        95 Jun  4 07:40 pilot_heartbeat.json
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas 177738367 Jun  4 07:40 HITS.45006595._053718.pool.root.1
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:40 boinc_task_state.xml
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas      1032 Jun  4 07:40 memory_monitor_summary.json
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas    283350 Jun  4 07:40 log.45006595._053718.job.log.tgz.1
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas      7686 Jun  4 07:40 heartbeat.json
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:41 wrapper_checkpoint.txt
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:41 boinc_mmap_file
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas      4353 Jun  4 07:41 pilotlog.txt
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas    311765 Jun  4 07:41 log.45006595._053718.job.log.1
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas       357 Jun  4 07:41 output.list
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:41 runtime_log
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas    614400 Jun  4 07:41 result.tar.gz
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 07:41 runtime_log.err
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas       649 Jun  4 07:41 IbHLDmiGwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpoaKDm1TieOm.diag
[2025-06-04 07:41:15] -rw-r--r--. 1 boincer umatlas     21444 Jun  4 07:41 stderr.txt
[2025-06-04 07:41:15] HITS file was successfully produced:
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas 177738367 Jun  4 07:40 shared/HITS.pool.root.1
[2025-06-04 07:41:15]  *** Contents of shared directory: ***
[2025-06-04 07:41:15] total 387636
[2025-06-04 07:41:15] -rw-r--r--. 2 boincer umatlas 218048813 Jun  4 06:50 ATLAS.root_0
[2025-06-04 07:41:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:50 start_atlas.sh
[2025-06-04 07:41:15] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 06:50 input.tar.gz
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas 177738367 Jun  4 07:40 HITS.pool.root.1
[2025-06-04 07:41:15] -rw-------. 1 boincer umatlas    614400 Jun  4 07:41 result.tar.gz
07:41:17 (2427375): run_atlas exited; CPU time 18998.835575
07:41:17 (2427375): called boinc_finish(0)

</stderr_txt>
]]>

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