Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:45 (3166413): wrapper (7.7.26015): starting
06:42:45 (3166413): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:42:45] Arguments: --nthreads 8
[2025-06-04 06:42:45] Threads: 8
[2025-06-04 06:42:45] Checking for CVMFS
[2025-06-04 06:42:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:42:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:42:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:42:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:42:45] 2.12.6.0 9081 31395 542008 146777 0 200 32887869 32935937 14219 16776704 0 178952888 99.653 159303895 25920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:42:45] CVMFS is ok
[2025-06-04 06:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:42:45] Further information can be found at the LHC@home message board.
[2025-06-04 06:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:42:45] Checking for apptainer binary...
[2025-06-04 06:42:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:42:45] Running /usr/bin/apptainer --version
[2025-06-04 06:42:45] apptainer version 1.4.1-1.el9
[2025-06-04 06:42:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:42:45] c6-12-29-3.aglt2.org
[2025-06-04 06:42:45] apptainer works
[2025-06-04 06:42:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:42:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:42:45] Starting ATLAS job with PandaID=6679050627
[2025-06-04 06:42:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:48:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:48:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:48:17]  is_altstaged=None
[2025-06-04 07:48:17]  is_tar=False
[2025-06-04 07:48:17]  lfn=log.45006595._055809.job.log.tgz.1
[2025-06-04 07:48:17]  mtime=0
[2025-06-04 07:48:17]  protocol_id=None
[2025-06-04 07:48:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:48:17]  replicas=None
[2025-06-04 07:48:17]  scope=mc23_13p6TeV
[2025-06-04 07:48:17]  status=None
[2025-06-04 07:48:17]  status_code=0
[2025-06-04 07:48:17]  storage_token=
[2025-06-04 07:48:17]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679050627/log.45006595._055809.job.log.tgz.1
[2025-06-04 07:48:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/0d/log.45006595._055809.job.log.tgz.1
[2025-06-04 07:48:17]  workdir=None
[2025-06-04 07:48:17] ]
[2025-06-04 07:48:17] 2025-06-04 11:47:51,015 | INFO     | transferring file log.45006595._055809.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679050627/log.45006595._055809.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:48:17] 2025-06-04 11:47:51,015 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679050627/log.45006595._055809.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055809.job
[2025-06-04 07:48:17] 2025-06-04 11:47:51,029 | INFO     | adding to output.list: log.45006595._055809.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/0d/log.45006595._055809.job.log.tg
[2025-06-04 07:48:17] 2025-06-04 11:47:51,030 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:48:17] 2025-06-04 11:47:51,030 | INFO     | summary of transferred files:
[2025-06-04 07:48:17] 2025-06-04 11:47:51,030 | INFO     |  -- lfn=log.45006595._055809.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:48:17] 2025-06-04 11:47:51,031 | INFO     | stage-out finished correctly
[2025-06-04 07:48:17] 2025-06-04 11:47:51,761 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:48:17] 2025-06-04 11:47:53,793 | INFO     | job 6679050627 has state=finished
[2025-06-04 07:48:17] 2025-06-04 11:47:53,794 | INFO     | preparing for final server update for job 6679050627 in state='finished'
[2025-06-04 07:48:17] 2025-06-04 11:47:53,794 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:48:17] 2025-06-04 11:47:53,794 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:48:17] 2025-06-04 11:47:53,794 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:48:17] 2025-06-04 11:47:53,794 | INFO     | job 6679050627 has finished - writing final server update
[2025-06-04 07:48:17] 2025-06-04 11:47:53,795 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:48:17] 2025-06-04 11:47:53,811 | INFO     | executing command: lscpu
[2025-06-04 07:48:17] 2025-06-04 11:47:53,891 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:48:17] 2025-06-04 11:47:54,891 | INFO     | PID=3170034 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:48:17] 2025-06-04 11:47:54,891 | INFO     | .. there are 22 such processes running
[2025-06-04 07:48:17] 2025-06-04 11:47:55,300 | WARNING  | process 3178232 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:48:17] 2025-06-04 11:47:55,300 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679050627/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:48:17] 2025-06-04 11:47:55,616 | INFO     | number of running child processes to parent process 3178232: 1
[2025-06-04 07:48:17] 2025-06-04 11:47:55,616 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:48:17] 2025-06-04 11:47:57,456 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:48:17] 2025-06-04 11:47:57,457 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679050627/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:48:17] 2025-06-04 11:47:57,457 | INFO     | extracted standard info from prmon json
[2025-06-04 07:48:17] 2025-06-04 11:47:57,457 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:48:17] 2025-06-04 11:47:57,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:48:17] 2025-06-04 11:47:57,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:48:17] 2025-06-04 11:47:57,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:48:17] 2025-06-04 11:47:57,460 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:48:17] 2025-06-04 11:47:57,460 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 07:48:17] 2025-06-04 11:47:57,460 | INFO     | sum of deviations: 4598337562.999999
[2025-06-04 07:48:17] 2025-06-04 11:47:57,460 | INFO     | mean x: 1749035812.0
[2025-06-04 07:48:17] 2025-06-04 11:47:57,460 | INFO     | mean y: 2165410.1403508773
[2025-06-04 07:48:17] 2025-06-04 11:47:57,460 | INFO     | -- intersect: -140095291277.1499
[2025-06-04 07:48:17] 2025-06-04 11:47:57,460 | INFO     | intersect: -140095291277.1499
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | chi2: 0.8540353945794287
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | -- intersect: -140095291277.1499
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | current memory leak: 80.10 B/s (using 57 data points, chi2=0.85)
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | ..............................
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | . Timing measurements:
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | . get job = 0 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | . initial setup = 3 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,461 | INFO     | . payload setup = 5 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,462 | INFO     | . stage-in = 0 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,462 | INFO     | . payload execution = 3871 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,462 | INFO     | . stage-out = 0 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,462 | INFO     | . log creation = 0 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,462 | INFO     | ..............................
[2025-06-04 07:48:17] 2025-06-04 11:47:57,552 | INFO     | 
[2025-06-04 07:48:17] 2025-06-04 11:47:57,552 | INFO     | job summary report
[2025-06-04 07:48:17] 2025-06-04 11:47:57,552 | INFO     | --------------------------------------------------
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | PanDA job id: 6679050627
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | task id: 45006595
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | errors: (none)
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | pilot state: finished 
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | transexitcode: 0
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | exeerrorcode: 0
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | exeerrordiag: 
[2025-06-04 07:48:17] 2025-06-04 11:47:57,553 | INFO     | exitcode: 0
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | exitmsg: OK
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | cpuconsumptiontime: 25839 s
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | nevents: 400
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | neventsw: 0
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | pid: 3178232
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | pgrp: 3178232
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | corecount: 8
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | event service: False
[2025-06-04 07:48:17] 2025-06-04 11:47:57,554 | INFO     | sizes: {0: 2405128, 4: 2405334, 11: 2405362, 3881: 2431100, 3882: 2440097, 3888: 2440211}
[2025-06-04 07:48:17] 2025-06-04 11:47:57,555 | INFO     | --------------------------------------------------
[2025-06-04 07:48:17] 2025-06-04 11:47:57,555 | INFO     | 
[2025-06-04 07:48:17] 2025-06-04 11:47:57,555 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 07:48:17] 2025-06-04 11:47:57,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | job 6679050627 has completed (purged errors)
[2025-06-04 07:48:17] 2025-06-04 11:47:57,575 | INFO     | overall cleanup function is called
[2025-06-04 07:48:17] 2025-06-04 11:47:58,583 | INFO     | --- collectZombieJob: --- 10, [3178232]
[2025-06-04 07:48:17] 2025-06-04 11:47:58,583 | INFO     | zombie collector waiting for pid 3178232
[2025-06-04 07:48:17] 2025-06-04 11:47:58,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:48:17] 2025-06-04 11:47:58,584 | INFO     | collected zombie processes
[2025-06-04 07:48:17] 2025-06-04 11:47:58,584 | INFO     | will attempt to kill all subprocesses of pid=3178232
[2025-06-04 07:48:17] 2025-06-04 11:47:58,796 | INFO     | process IDs to be killed: [3178232] (in reverse order)
[2025-06-04 07:48:17] 2025-06-04 11:47:58,863 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:48:17] 2025-06-04 11:47:58,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:48:17] 2025-06-04 11:47:58,879 | INFO     | did not find any defunct processes belonging to 3178232
[2025-06-04 07:48:17] 2025-06-04 11:47:58,889 | INFO     | did not find any defunct processes belonging to 3178232
[2025-06-04 07:48:17] 2025-06-04 11:47:58,889 | INFO     | ready for new job
[2025-06-04 07:48:17] 2025-06-04 11:47:58,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:48:17] 2025-06-04 11:47:58,890 | INFO     | **************************************
[2025-06-04 07:48:17] 2025-06-04 11:47:58,890 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:48:17] 2025-06-04 11:47:58,890 | INFO     | **************************************
[2025-06-04 07:48:17] 2025-06-04 11:47:58,890 | INFO     | 
[2025-06-04 07:48:17] 2025-06-04 11:47:58,905 | INFO     | architecture information:
[2025-06-04 07:48:17] 2025-06-04 11:47:58,905 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:48:17] 2025-06-04 11:47:58,920 | INFO     | cat /etc/os-release:
[2025-06-04 07:48:17] NAME="CentOS Linux"
[2025-06-04 07:48:17] VERSION="7 (Core)"
[2025-06-04 07:48:17] ID="centos"
[2025-06-04 07:48:17] ID_LIKE="rhel fedora"
[2025-06-04 07:48:17] VERSION_ID="7"
[2025-06-04 07:48:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:48:17] ANSI_COLOR="0;31"
[2025-06-04 07:48:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:48:17] HOME_URL="https://www.centos.org/"
[2025-06-04 07:48:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:48:17] 
[2025-06-04 07:48:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:48:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:48:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:48:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:48:17] 
[2025-06-04 07:48:17] 2025-06-04 11:47:58,920 | INFO     | **************************************
[2025-06-04 07:48:17] 2025-06-04 11:47:59,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 07:48:17] 2025-06-04 11:47:59,437 | INFO     | sufficient remaining disk space (95659491328 B)
[2025-06-04 07:48:17] 2025-06-04 11:47:59,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:48:17] 2025-06-04 11:47:59,438 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:48:17] 2025-06-04 11:47:59,438 | INFO     | update_server=False
[2025-06-04 07:48:17] 2025-06-04 11:47:59,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:48:17] 2025-06-04 11:47:59,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:48:17] 2025-06-04 11:47:59,439 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:48:17] 2025-06-04 11:47:59,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:48:17] 2025-06-04 11:47:59,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:48:17] 2025-06-04 11:47:59,439 | INFO     | aborting loop
[2025-06-04 07:48:17] 2025-06-04 11:47:59,440 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:48:17] 2025-06-04 11:47:59,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:48:17] 2025-06-04 11:47:59,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:48:17] 2025-06-04 11:47:59,507 | INFO     | all job control threads have been joined
[2025-06-04 07:48:17] 2025-06-04 11:48:00,266 | INFO     | all payload control threads have been joined
[2025-06-04 07:48:17] 2025-06-04 11:48:00,441 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:00,443 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:00,446 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:00,458 | INFO     | all data control threads have been joined
[2025-06-04 07:48:17] 2025-06-04 11:48:00,513 | INFO     | [job] control thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:00,750 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:00,915 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:00,984 | INFO     | [job] validate thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:01,247 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:01,271 | INFO     | [payload] control thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:01,421 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:01,445 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:01,463 | INFO     | [data] control thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:01,747 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:01,823 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:02,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:48:17] 2025-06-04 11:48:06,360 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:09,582 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:48:17] 2025-06-04 11:48:10,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:48:17] 2025-06-04 11:48:12,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381148129088)>', '<ExcThread(monitor, started 140380527912704)>']
[2025-06-04 07:48:17] 2025-06-04 11:48:13,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:48:17] 2025-06-04 11:48:13,503 | INFO     | [monitor] control thread has ended
[2025-06-04 07:48:17] 2025-06-04 11:48:17,551 | INFO     | all workflow threads have been joined
[2025-06-04 07:48:17] 2025-06-04 11:48:17,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:48:17] 2025-06-04 11:48:17,552 | INFO     | traces error code: 0
[2025-06-04 07:48:17] 2025-06-04 11:48:17,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:48:17] 2025-06-04 11:48:17,708 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:48:17] 2025-06-04 11:48:17,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:48:17] 2025-06-04 11:48:17,712 [wrapper] pilotpid: 3170034
[2025-06-04 07:48:17] 2025-06-04 11:48:17,714 [wrapper] Pilot exit status: 0
[2025-06-04 07:48:17] 2025-06-04 11:48:17,723 [wrapper] pandaids: 6679050627
[2025-06-04 07:48:17] 2025-06-04 11:48:17,792 [wrapper] cleanup supervisor_pilot 3398853 3170035
[2025-06-04 07:48:17] 2025-06-04 11:48:17,795 [wrapper] Test setup, not cleaning
[2025-06-04 07:48:17] 2025-06-04 11:48:17,798 [wrapper] apfmon messages muted
[2025-06-04 07:48:17] 2025-06-04 11:48:17,800 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:48:17] 2025-06-04 11:48:17,802 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:48:17]  *** Error codes and diagnostics ***
[2025-06-04 07:48:17]     "exeErrorCode": 0,
[2025-06-04 07:48:17]     "exeErrorDiag": "",
[2025-06-04 07:48:17]     "pilotErrorCode": 0,
[2025-06-04 07:48:17]     "pilotErrorDiag": "",
[2025-06-04 07:48:17]  *** Listing of results directory ***
[2025-06-04 07:48:17] total 393512
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 07:48:17] -rwx------. 1 boincer umatlas     37140 Jun  4 04:45 runpilot2-wrapper.sh
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:45 queuedata.json
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:48:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:42 run_atlas
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:42 job.xml
[2025-06-04 07:48:17] -rw-r--r--. 2 boincer umatlas 216620477 Jun  4 06:42 EVNT.45006593._000120.pool.root.1
[2025-06-04 07:48:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:42 start_atlas.sh
[2025-06-04 07:48:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:42 shared
[2025-06-04 07:48:17] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 06:42 input.tar.gz
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:42 boinc_lockfile
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 06:42 pandaJob.out
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas    986812 Jun  4 06:42 agis_schedconf.cvmfs.json
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:48:17] drwx------. 4 boincer umatlas      4096 Jun  4 06:42 pilot3
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas        95 Jun  4 07:47 pilot_heartbeat.json
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas 181147312 Jun  4 07:47 HITS.45006595._055809.pool.root.1
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:47 boinc_task_state.xml
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 07:47 init_data.xml
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas      1039 Jun  4 07:47 memory_monitor_summary.json
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas    289699 Jun  4 07:47 log.45006595._055809.job.log.tgz.1
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas      7720 Jun  4 07:47 heartbeat.json
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:48 wrapper_checkpoint.txt
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:48 boinc_mmap_file
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas      4548 Jun  4 07:48 pilotlog.txt
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas    390576 Jun  4 07:48 log.45006595._055809.job.log.1
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas       357 Jun  4 07:48 output.list
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:48 runtime_log
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas    696320 Jun  4 07:48 result.tar.gz
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 07:48 runtime_log.err
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas       653 Jun  4 07:48 DL1LDmbvyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtonKDmeNHEVo.diag
[2025-06-04 07:48:17] -rw-r--r--. 1 boincer umatlas     21421 Jun  4 07:48 stderr.txt
[2025-06-04 07:48:17] HITS file was successfully produced:
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas 181147312 Jun  4 07:47 shared/HITS.pool.root.1
[2025-06-04 07:48:17]  *** Contents of shared directory: ***
[2025-06-04 07:48:17] total 389648
[2025-06-04 07:48:17] -rw-r--r--. 2 boincer umatlas 216620477 Jun  4 06:42 ATLAS.root_0
[2025-06-04 07:48:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:42 start_atlas.sh
[2025-06-04 07:48:17] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 06:42 input.tar.gz
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas 181147312 Jun  4 07:47 HITS.pool.root.1
[2025-06-04 07:48:17] -rw-------. 1 boincer umatlas    696320 Jun  4 07:48 result.tar.gz
07:48:19 (3166413): run_atlas exited; CPU time 25996.107527
07:48:19 (3166413): called boinc_finish(0)

</stderr_txt>
]]>

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