Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:16:41 (2930331): wrapper (7.7.26015): starting
04:16:41 (2930331): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:16:41] Arguments: --nthreads 12
[2025-06-04 04:16:41] Threads: 12
[2025-06-04 04:16:41] Checking for CVMFS
[2025-06-04 04:16:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:16:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:16:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:16:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:16:41] 2.11.5.0 1039557 23561 152452 146778 3 57 31797419 45568000 22428 130560 0 226861034 99.850 118554928 24700 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 04:16:41] CVMFS is ok
[2025-06-04 04:16:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:16:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:16:41] Further information can be found at the LHC@home message board.
[2025-06-04 04:16:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:16:41] Checking for apptainer binary...
[2025-06-04 04:16:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:16:41] Running /usr/bin/apptainer --version
[2025-06-04 04:16:41] apptainer version 1.4.0-1.el9
[2025-06-04 04:16:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:16:42] wns0098.triumf.lcg
[2025-06-04 04:16:42] apptainer works
[2025-06-04 04:16:42] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:16:42] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:16:42] Starting ATLAS job with PandaID=6679029181
[2025-06-04 04:16:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:22:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:22:50] 2025-06-04 11:22:32,612 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 04:22:50] 2025-06-04 11:22:32,612 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6679029181/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | INFO     | extracted standard info from prmon json
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | wrong length of table data, x=[1749035962.0], y=[2236.0] (must be same and length>=4)
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | ..............................
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . Timing measurements:
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . get job = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . initial setup = 6 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . payload setup = 32 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . stage-in = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . payload execution = 70 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . stage-out = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . log creation = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | ..............................
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:22:50] 2025-06-04 11:22:32,621 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679029181/pilotlog.txt
[2025-06-04 04:22:50] 2025-06-04 11:22:32,645 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 04:22:50] - Log from pilotlog.txt -
[2025-06-04 04:22:50] 2025-06-04 11:22:32,612 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 04:22:50] 2025-06-04 11:22:32,612 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6679029181/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | INFO     | extracted standard info from prmon json
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | wrong length of table data, x=[1749035962.0], y=[2236.0] (must be same and length>=4)
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | ..............................
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . Timing measurements:
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . get job = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . initial setup = 6 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . payload setup = 32 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . stage-in = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . payload execution = 70 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . stage-out = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . log creation = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | ..............................
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:22:50] 2025-06-04 11:22:32,621 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679029181/pilotlog.txt
[2025-06-04 04:22:50] 2025-06-04 11:22:32,646 | WARNING  | 
[2025-06-04 04:22:50] [begin log extracts]
[2025-06-04 04:22:50] - Log from pilotlog.txt -
[2025-06-04 04:22:50] 2025-06-04 11:22:32,612 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 04:22:50] 2025-06-04 11:22:32,612 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6679029181/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | INFO     | extracted standard info from prmon json
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:22:50] 2025-06-04 11:22:32,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:22:50] 2025-06-04 11:22:32,619 | WARNING  | wrong length of table data, x=[1749035962.0], y=[2236.0] (must be same and length>=4)
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | ..............................
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . Timing measurements:
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . get job = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . initial setup = 6 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . payload setup = 32 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . stage-in = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . payload execution = 70 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . stage-out = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | . log creation = 0 s
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | ..............................
[2025-06-04 04:22:50] 2025-06-04 11:22:32,620 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 04:22:50] 2025-06-04 11:22:32,621 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679029181/pilotlog.txt
[2025-06-04 04:22:50] [end log extracts]
[2025-06-04 04:22:50] 2025-06-04 11:22:32,646 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 04:22:50] 2025-06-04 11:22:32,649 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | 
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | job summary report
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | --------------------------------------------------
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | PanDA job id: 6679029181
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | task id: 45006595
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 04:20:00,073 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:22:50] 2025-06-04 11:22:33,122 | INFO     | pilot state: failed 
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | transexitcode: 65
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | exeerrorcode: 65
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | exitcode: 65
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | cpuconsumptiontime: 21 s
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | nevents: 0
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | neventsw: 0
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | pid: 2948997
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | pgrp: 2948997
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | corecount: 12
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | event service: False
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | sizes: {0: 2404960, 1: 2405159, 2: 2405159, 13: 2405187, 24: 2405243, 27: 2405477, 35: 2405633, 106: 2428814, 107: 2433049, 109: 2433077, 250: 2433247}
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | --------------------------------------------------
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | 
[2025-06-04 04:22:50] 2025-06-04 11:22:33,123 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 04:22:50] 2025-06-04 11:22:33,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:22:50] 2025-06-04 11:22:33,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:22:50] 2025-06-04 11:22:33,213 | INFO     | job 6679029181 has completed (purged errors)
[2025-06-04 04:22:50] 2025-06-04 11:22:33,213 | INFO     | overall cleanup function is called
[2025-06-04 04:22:50] 2025-06-04 11:22:34,220 | INFO     | --- collectZombieJob: --- 10, [2948997]
[2025-06-04 04:22:50] 2025-06-04 11:22:34,220 | INFO     | zombie collector waiting for pid 2948997
[2025-06-04 04:22:50] 2025-06-04 11:22:34,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:22:50] 2025-06-04 11:22:34,220 | INFO     | collected zombie processes
[2025-06-04 04:22:50] 2025-06-04 11:22:34,220 | INFO     | will attempt to kill all subprocesses of pid=2948997
[2025-06-04 04:22:50] 2025-06-04 11:22:35,131 | INFO     | process IDs to be killed: [2948997] (in reverse order)
[2025-06-04 04:22:50] 2025-06-04 11:22:35,236 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:22:50] 2025-06-04 11:22:35,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:22:50] 2025-06-04 11:22:35,265 | INFO     | did not find any defunct processes belonging to 2948997
[2025-06-04 04:22:50] 2025-06-04 11:22:35,293 | INFO     | did not find any defunct processes belonging to 2948997
[2025-06-04 04:22:50] 2025-06-04 11:22:35,293 | INFO     | ready for new job
[2025-06-04 04:22:50] 2025-06-04 11:22:35,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:22:50] 2025-06-04 11:22:35,295 | INFO     | **************************************
[2025-06-04 04:22:50] 2025-06-04 11:22:35,295 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:22:50] 2025-06-04 11:22:35,295 | INFO     | **************************************
[2025-06-04 04:22:50] 2025-06-04 11:22:35,295 | INFO     | 
[2025-06-04 04:22:50] 2025-06-04 11:22:35,302 | INFO     | architecture information:
[2025-06-04 04:22:50] 2025-06-04 11:22:35,306 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:22:50] 2025-06-04 11:22:35,347 | INFO     | cat /etc/os-release:
[2025-06-04 04:22:50] NAME="CentOS Linux"
[2025-06-04 04:22:50] VERSION="7 (Core)"
[2025-06-04 04:22:50] ID="centos"
[2025-06-04 04:22:50] ID_LIKE="rhel fedora"
[2025-06-04 04:22:50] VERSION_ID="7"
[2025-06-04 04:22:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:22:50] ANSI_COLOR="0;31"
[2025-06-04 04:22:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:22:50] HOME_URL="https://www.centos.org/"
[2025-06-04 04:22:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:22:50] 
[2025-06-04 04:22:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:22:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:22:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:22:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:22:50] 
[2025-06-04 04:22:50] 2025-06-04 11:22:35,347 | INFO     | **************************************
[2025-06-04 04:22:50] 2025-06-04 11:22:35,851 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 04:22:50] 2025-06-04 11:22:35,887 | INFO     | sufficient remaining disk space (1709150568448 B)
[2025-06-04 04:22:50] 2025-06-04 11:22:35,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:22:50] 2025-06-04 11:22:35,888 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:22:50] 2025-06-04 11:22:35,888 | INFO     | update_server=False
[2025-06-04 04:22:50] 2025-06-04 11:22:35,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:22:50] 2025-06-04 11:22:35,922 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:22:50] 2025-06-04 11:22:35,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:22:50] 2025-06-04 11:22:35,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:22:50] 2025-06-04 11:22:35,958 | INFO     | all job control threads have been joined
[2025-06-04 04:22:50] 2025-06-04 11:22:36,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:22:50] 2025-06-04 11:22:36,677 | INFO     | all data control threads have been joined
[2025-06-04 04:22:50] 2025-06-04 11:22:36,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:22:50] 2025-06-04 11:22:36,697 | INFO     | aborting loop
[2025-06-04 04:22:50] 2025-06-04 11:22:36,798 | INFO     | all payload control threads have been joined
[2025-06-04 04:22:50] 2025-06-04 11:22:36,894 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:36,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:36,964 | INFO     | [job] control thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:37,669 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:37,684 | INFO     | [data] control thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:37,703 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:37,804 | INFO     | [payload] control thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:37,837 | INFO     | [job] validate thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:37,837 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:38,055 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:38,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:22:50] 2025-06-04 11:22:38,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:22:50] 2025-06-04 11:22:38,322 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:38,385 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:38,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:38,433 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:39,120 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:42,111 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:22:50] 2025-06-04 11:22:43,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339053000512)>', '<ExcThread(monitor, started 140338526156544)>']
[2025-06-04 04:22:50] 2025-06-04 11:22:43,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:22:50] 2025-06-04 11:22:43,970 | INFO     | [monitor] control thread has ended
[2025-06-04 04:22:50] 2025-06-04 11:22:48,624 | INFO     | all workflow threads have been joined
[2025-06-04 04:22:50] 2025-06-04 11:22:48,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:22:50] 2025-06-04 11:22:48,624 | INFO     | traces error code: 0
[2025-06-04 04:22:50] 2025-06-04 11:22:48,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:22:50] 2025-06-04 11:22:49,330 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:22:50] 2025-06-04 11:22:49,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:22:50] 2025-06-04 11:22:49,378 [wrapper] pilotpid: 2933917
[2025-06-04 04:22:50] 2025-06-04 11:22:49,412 [wrapper] Pilot exit status: 0
[2025-06-04 04:22:50] 2025-06-04 11:22:49,556 [wrapper] pandaids: 6679029181
[2025-06-04 04:22:50] 2025-06-04 11:22:49,746 [wrapper] cleanup supervisor_pilot 2933923 2933918
[2025-06-04 04:22:50] 2025-06-04 11:22:49,749 [wrapper] Test setup, not cleaning
[2025-06-04 04:22:50] 2025-06-04 11:22:49,751 [wrapper] apfmon messages muted
[2025-06-04 04:22:50] 2025-06-04 11:22:49,754 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:22:50] 2025-06-04 11:22:49,764 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:22:50]  *** Error codes and diagnostics ***
[2025-06-04 04:22:50]     "exeErrorCode": 65,
[2025-06-04 04:22:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:22:50]     "pilotErrorCode": 1305,
[2025-06-04 04:22:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 04:22:50]  *** Listing of results directory ***
[2025-06-04 04:22:50] total 217692
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:31 pilot3.tar.gz
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:43 queuedata.json
[2025-06-04 04:22:50] -rwx------. 1 boinc boinc     37140 Jun  4 01:44 runpilot2-wrapper.sh
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc       100 Jun  4 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:22:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 04:16 run_atlas
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc       105 Jun  4 04:16 job.xml
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc      6596 Jun  4 04:16 init_data.xml
[2025-06-04 04:22:50] -rw-r--r--. 2 boinc boinc 218871711 Jun  4 04:16 EVNT.45006593._001229.pool.root.1
[2025-06-04 04:22:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:16 start_atlas.sh
[2025-06-04 04:22:50] drwxrwx--x. 2 boinc boinc      4096 Jun  4 04:16 shared
[2025-06-04 04:22:50] -rw-r--r--. 2 boinc boinc    508886 Jun  4 04:16 input.tar.gz
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc         0 Jun  4 04:16 boinc_lockfile
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc      2525 Jun  4 04:16 pandaJob.out
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc    986812 Jun  4 04:17 agis_schedconf.cvmfs.json
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc   1603667 Jun  4 04:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:22:50] drwx------. 4 boinc boinc      4096 Jun  4 04:17 pilot3
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc       524 Jun  4 04:20 boinc_task_state.xml
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc       961 Jun  4 04:20 memory_monitor_summary.json
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc     21922 Jun  4 04:20 log.45006595._055791.job.log.tgz.1
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc        95 Jun  4 04:22 pilot_heartbeat.json
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc      8339 Jun  4 04:22 heartbeat.json
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:22 boinc_mmap_file
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc        23 Jun  4 04:22 wrapper_checkpoint.txt
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc      4352 Jun  4 04:22 pilotlog.txt
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc     82221 Jun  4 04:22 log.45006595._055791.job.log.1
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc       188 Jun  4 04:22 output.list
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:22 runtime_log
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc    122880 Jun  4 04:22 result.tar.gz
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc      8484 Jun  4 04:22 runtime_log.err
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc       647 Jun  4 04:22 3tELDmzuyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYonKDmyMMSsn.diag
[2025-06-04 04:22:50] -rw-r--r--. 1 boinc boinc     21166 Jun  4 04:22 stderr.txt
[2025-06-04 04:22:50] No HITS result produced
[2025-06-04 04:22:50]  *** Contents of shared directory: ***
[2025-06-04 04:22:50] total 214384
[2025-06-04 04:22:50] -rw-r--r--. 2 boinc boinc 218871711 Jun  4 04:16 ATLAS.root_0
[2025-06-04 04:22:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:16 start_atlas.sh
[2025-06-04 04:22:50] -rw-r--r--. 2 boinc boinc    508886 Jun  4 04:16 input.tar.gz
[2025-06-04 04:22:50] -rw-------. 1 boinc boinc    122880 Jun  4 04:22 result.tar.gz
04:22:51 (2930331): run_atlas exited; CPU time 35.782123
04:22:51 (2930331): called boinc_finish(0)

</stderr_txt>
]]>

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