Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:50:13 (17556): wrapper (7.7.26015): starting
00:50:13 (17556): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:50:13] Arguments: --nthreads 8
[2025-06-05 00:50:13] Threads: 8
[2025-06-05 00:50:13] Checking for CVMFS
[2025-06-05 00:50:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:50:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:50:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:50:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:50:15] 2.11.2.0 13500 33942 88084 146797 2 16 19340870 25165824 3519 130560 0 17047160 99.836 19400802 2595 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 00:50:15] CVMFS is ok
[2025-06-05 00:50:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:50:15] Checking for apptainer binary...
[2025-06-05 00:50:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:50:15] Running /usr/bin/apptainer --version
[2025-06-05 00:50:15] apptainer version 1.3.2-1.el7
[2025-06-05 00:50:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:43:08] cg-vwn363.simple-grid.lan
[2025-06-05 01:43:08] apptainer works
[2025-06-05 01:43:08] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:43:08] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:43:09] Starting ATLAS job with PandaID=6678363787
[2025-06-05 01:43:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:51:57]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:51:57] 2025-06-05 03:38:19,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:51:57] 2025-06-05 03:38:19,630 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:51:57] 2025-06-05 03:38:19,630 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:51:57] 2025-06-05 03:38:19,636 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:51:57] 2025-06-05 03:38:19,637 | INFO     | sum of square deviations: 3675146117.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,649 | INFO     | sum of deviations: -8657076842.499985
[2025-06-05 09:51:57] 2025-06-05 03:38:19,649 | INFO     | mean x: 1749087618.5
[2025-06-05 09:51:57] 2025-06-05 03:38:19,649 | INFO     | mean y: 2484929.293859649
[2025-06-05 09:51:57] 2025-06-05 03:38:19,649 | INFO     | -- intersect: 4122589391.9648867
[2025-06-05 09:51:57] 2025-06-05 03:38:19,650 | INFO     | intersect: 4122589391.9648867
[2025-06-05 09:51:57] 2025-06-05 03:38:19,650 | INFO     | chi2: 2.706051868318515
[2025-06-05 09:51:57] 2025-06-05 03:38:19,650 | INFO     | sum of square deviations: 3438620752.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,652 | INFO     | sum of deviations: 6572625743.000006
[2025-06-05 09:51:57] 2025-06-05 03:38:19,652 | INFO     | mean x: 1749087466.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,653 | INFO     | mean y: 2494576.4394618836
[2025-06-05 09:51:57] 2025-06-05 03:38:19,653 | INFO     | -- intersect: -3340734623.554108
[2025-06-05 09:51:57] 2025-06-05 03:38:19,653 | INFO     | intersect: -3340734623.554108
[2025-06-05 09:51:57] 2025-06-05 03:38:19,653 | INFO     | chi2: 1.9404080543897877
[2025-06-05 09:51:57] 2025-06-05 03:38:19,653 | INFO     | current chi2=1.9404080543897877 (change=28.293759735081593 %)
[2025-06-05 09:51:57] 2025-06-05 03:38:19,654 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 09:51:57] 2025-06-05 03:38:19,655 | INFO     | sum of deviations: 6516613560.500001
[2025-06-05 09:51:57] 2025-06-05 03:38:19,656 | INFO     | mean x: 1749087313.5
[2025-06-05 09:51:57] 2025-06-05 03:38:19,656 | INFO     | mean y: 2494538.6559633026
[2025-06-05 09:51:57] 2025-06-05 03:38:19,656 | INFO     | -- intersect: -3545595982.574468
[2025-06-05 09:51:57] 2025-06-05 03:38:19,656 | INFO     | intersect: -3545595982.574468
[2025-06-05 09:51:57] 2025-06-05 03:38:19,656 | INFO     | chi2: 1.9410730443819493
[2025-06-05 09:51:57] 2025-06-05 03:38:19,657 | INFO     | current chi2=1.9410730443819493 (change=-0.034270626256017234 %)
[2025-06-05 09:51:57] 2025-06-05 03:38:19,657 | INFO     | right removable region: 217
[2025-06-05 09:51:57] 2025-06-05 03:38:19,657 | INFO     | sum of square deviations: 3438620752.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,659 | INFO     | sum of deviations: -50184470152.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,659 | INFO     | mean x: 1749087771.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,659 | INFO     | mean y: 2511491.735426009
[2025-06-05 09:51:57] 2025-06-05 03:38:19,659 | INFO     | -- intersect: 25529328598.833984
[2025-06-05 09:51:57] 2025-06-05 03:38:19,659 | INFO     | intersect: 25529328598.833984
[2025-06-05 09:51:57] 2025-06-05 03:38:19,660 | INFO     | chi2: 0.9657914215134656
[2025-06-05 09:51:57] 2025-06-05 03:38:19,660 | INFO     | current chi2=0.9657914215134656 (change=64.30994420984293 %)
[2025-06-05 09:51:57] 2025-06-05 03:38:19,660 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 09:51:57] 2025-06-05 03:38:19,662 | INFO     | sum of deviations: -45897975691.00001
[2025-06-05 09:51:57] 2025-06-05 03:38:19,662 | INFO     | mean x: 1749087923.5
[2025-06-05 09:51:57] 2025-06-05 03:38:19,662 | INFO     | mean y: 2508575.0458715595
[2025-06-05 09:51:57] 2025-06-05 03:38:19,663 | INFO     | -- intersect: 24992517231.46595
[2025-06-05 09:51:57] 2025-06-05 03:38:19,663 | INFO     | intersect: 24992517231.46595
[2025-06-05 09:51:57] 2025-06-05 03:38:19,677 | INFO     | chi2: 0.9547396430033852
[2025-06-05 09:51:57] 2025-06-05 03:38:19,677 | INFO     | current chi2=0.9547396430033852 (change=1.1443235323794334 %)
[2025-06-05 09:51:57] 2025-06-05 03:38:19,677 | INFO     | left removable region: 20
[2025-06-05 09:51:57] 2025-06-05 03:38:19,677 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,679 | INFO     | sum of deviations: -15831195250.999996
[2025-06-05 09:51:57] 2025-06-05 03:38:19,679 | INFO     | mean x: 1749087893.0
[2025-06-05 09:51:57] 2025-06-05 03:38:19,679 | INFO     | mean y: 2508773.8629441625
[2025-06-05 09:51:57] 2025-06-05 03:38:19,679 | INFO     | -- intersect: 11682954804.919397
[2025-06-05 09:51:57] 2025-06-05 03:38:19,679 | INFO     | intersect: 11682954804.919397
[2025-06-05 09:51:57] 2025-06-05 03:38:19,680 | INFO     | chi2: 0.1187641220837105
[2025-06-05 09:51:57] 2025-06-05 03:38:19,680 | INFO     | -- intersect: 11682954804.919397
[2025-06-05 09:51:57] 2025-06-05 03:38:19,680 | INFO     | current memory leak: -6.68 B/s (using 197 data points, chi2=0.12)
[2025-06-05 09:51:57] 2025-06-05 03:38:19,681 | INFO     | ..............................
[2025-06-05 09:51:57] 2025-06-05 03:38:19,681 | INFO     | . Timing measurements:
[2025-06-05 09:51:57] 2025-06-05 03:38:19,681 | INFO     | . get job = 0 s
[2025-06-05 09:51:57] 2025-06-05 03:38:19,681 | INFO     | . initial setup = 2 s
[2025-06-05 09:51:57] 2025-06-05 03:38:19,681 | INFO     | . payload setup = 14 s
[2025-06-05 09:51:57] 2025-06-05 03:38:19,681 | INFO     | . stage-in = 0 s
[2025-06-05 09:51:57] 2025-06-05 03:38:19,682 | INFO     | . payload execution = 13921 s
[2025-06-05 09:51:57] 2025-06-05 03:38:19,682 | INFO     | . stage-out = 2 s
[2025-06-05 09:51:57] 2025-06-05 03:38:19,682 | INFO     | . log creation = 0 s
[2025-06-05 09:51:57] 2025-06-05 03:38:19,682 | INFO     | ..............................
[2025-06-05 09:51:57] 2025-06-05 03:38:20,040 | INFO     | 
[2025-06-05 09:51:57] 2025-06-05 03:38:20,040 | INFO     | job summary report
[2025-06-05 09:51:57] 2025-06-05 03:38:20,040 | INFO     | --------------------------------------------------
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | PanDA job id: 6678363787
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | task id: 45006595
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | errors: (none)
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | pilot state: finished 
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | transexitcode: 0
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | exeerrorcode: 0
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | exeerrordiag: 
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | exitcode: 0
[2025-06-05 09:51:57] 2025-06-05 03:38:20,041 | INFO     | exitmsg: OK
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | cpuconsumptiontime: 52151 s
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | nevents: 400
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | neventsw: 0
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | pid: 26584
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | pgrp: 26584
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | corecount: 8
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | event service: False
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 13: 2397604, 23: 2397660, 13938: 2427336, 13939: 2427463, 13942: 2436516, 14047: 2436630}
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | --------------------------------------------------
[2025-06-05 09:51:57] 2025-06-05 03:38:20,042 | INFO     | 
[2025-06-05 09:51:57] 2025-06-05 03:38:20,043 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 09:51:57] 2025-06-05 03:38:20,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,673 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,673 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,673 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:51:57] 2025-06-05 03:38:20,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:51:57] 2025-06-05 03:38:20,675 | INFO     | job 6678363787 has completed (purged errors)
[2025-06-05 09:51:57] 2025-06-05 03:38:20,675 | INFO     | overall cleanup function is called
[2025-06-05 09:51:57] 2025-06-05 03:38:21,688 | INFO     | --- collectZombieJob: --- 10, [26584]
[2025-06-05 09:51:57] 2025-06-05 03:38:21,688 | INFO     | zombie collector waiting for pid 26584
[2025-06-05 09:51:57] 2025-06-05 03:38:21,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:51:57] 2025-06-05 03:38:21,689 | INFO     | collected zombie processes
[2025-06-05 09:51:57] 2025-06-05 03:38:21,689 | INFO     | will attempt to kill all subprocesses of pid=26584
[2025-06-05 09:51:57] 2025-06-05 03:38:21,823 | INFO     | process IDs to be killed: [26584] (in reverse order)
[2025-06-05 09:51:57] 2025-06-05 03:38:22,571 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:51:57] 2025-06-05 03:38:22,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:51:57] 2025-06-05 03:38:22,575 | INFO     | did not find any defunct processes belonging to 26584
[2025-06-05 09:51:57] 2025-06-05 03:38:22,578 | INFO     | did not find any defunct processes belonging to 26584
[2025-06-05 09:51:57] 2025-06-05 03:38:22,579 | INFO     | ready for new job
[2025-06-05 09:51:57] 2025-06-05 03:38:22,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:51:57] 2025-06-05 03:38:22,581 | INFO     | **************************************
[2025-06-05 09:51:57] 2025-06-05 03:38:22,581 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:51:57] 2025-06-05 03:38:22,581 | INFO     | **************************************
[2025-06-05 09:51:57] 2025-06-05 03:38:22,581 | INFO     | 
[2025-06-05 09:51:57] 2025-06-05 03:38:22,582 | INFO     | pilot is running in a VM
[2025-06-05 09:51:57] 2025-06-05 03:38:22,582 | INFO     | architecture information:
[2025-06-05 09:51:57] 2025-06-05 03:38:22,591 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:51:57] 2025-06-05 03:38:22,916 | INFO     | cat /etc/os-release:
[2025-06-05 09:51:57] NAME="CentOS Linux"
[2025-06-05 09:51:57] VERSION="7 (Core)"
[2025-06-05 09:51:57] ID="centos"
[2025-06-05 09:51:57] ID_LIKE="rhel fedora"
[2025-06-05 09:51:57] VERSION_ID="7"
[2025-06-05 09:51:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:51:57] ANSI_COLOR="0;31"
[2025-06-05 09:51:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:51:57] HOME_URL="https://www.centos.org/"
[2025-06-05 09:51:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:51:57] 
[2025-06-05 09:51:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:51:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:51:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:51:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:51:57] 
[2025-06-05 09:51:57] 2025-06-05 03:38:22,917 | INFO     | **************************************
[2025-06-05 09:51:57] 2025-06-05 03:38:23,420 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 09:51:57] 2025-06-05 03:38:23,495 | INFO     | sufficient remaining disk space (497169727488 B)
[2025-06-05 09:51:57] 2025-06-05 03:38:23,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:51:57] 2025-06-05 03:38:23,495 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:51:57] 2025-06-05 03:38:23,496 | INFO     | update_server=False
[2025-06-05 09:51:57] 2025-06-05 03:38:23,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:51:57] 2025-06-05 03:38:23,497 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 09:51:57] 2025-06-05 03:38:23,498 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:51:57] 2025-06-05 03:38:23,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:51:57] 2025-06-05 03:38:23,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:51:57] 2025-06-05 03:38:23,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:51:57] 2025-06-05 03:38:23,793 | INFO     | all job control threads have been joined
[2025-06-05 09:51:57] 2025-06-05 03:38:23,943 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 09:51:57] 2025-06-05 03:38:23,943 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 09:51:57] 2025-06-05 03:38:23,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:51:57] 2025-06-05 03:38:23,944 | INFO     | will abort loop
[2025-06-05 09:51:57] 2025-06-05 03:38:24,072 | INFO     | all data control threads have been joined
[2025-06-05 09:51:57] 2025-06-05 03:38:24,502 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:24,627 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:24,799 | INFO     | [job] control thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:24,845 | INFO     | all payload control threads have been joined
[2025-06-05 09:51:57] 2025-06-05 03:38:24,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:51:57] 2025-06-05 03:38:24,949 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,078 | INFO     | [data] control thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:51:57] 2025-06-05 03:38:25,273 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,533 | INFO     | [job] validate thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,675 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,692 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,748 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,849 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,850 | INFO     | [payload] control thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,854 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,870 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:25,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:29,259 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:51:57] 2025-06-05 03:38:30,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966702999360)>', '<ExcThread(monitor, started 139966139070208)>']
[2025-06-05 09:51:57] 2025-06-05 03:38:31,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:51:57] 2025-06-05 03:38:31,546 | INFO     | [monitor] control thread has ended
[2025-06-05 09:51:57] 2025-06-05 03:38:35,853 | INFO     | all workflow threads have been joined
[2025-06-05 09:51:57] 2025-06-05 03:38:35,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:51:57] 2025-06-05 03:38:35,854 | INFO     | traces error code: 0
[2025-06-05 09:51:57] 2025-06-05 03:38:35,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:51:57] 2025-06-05 03:38:36,236 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:51:57] 2025-06-05 03:38:36,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:51:57] 2025-06-05 03:38:36,393 [wrapper] pilotpid: 18035
[2025-06-05 09:51:57] 2025-06-05 03:38:36,472 [wrapper] Pilot exit status: 0
[2025-06-05 09:51:57] 2025-06-05 03:38:37,026 [wrapper] pandaids: 6678363787
[2025-06-05 09:51:57] 2025-06-05 03:38:37,518 [wrapper] cleanup supervisor_pilot 11596 18036
[2025-06-05 09:51:57] 2025-06-05 03:38:37,603 [wrapper] Test setup, not cleaning
[2025-06-05 09:51:57] 2025-06-05 03:38:37,675 [wrapper] apfmon messages muted
[2025-06-05 09:51:57] 2025-06-05 03:38:37,746 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:51:57] 2025-06-05 03:38:37,784 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:51:57]  *** Error codes and diagnostics ***
[2025-06-05 09:51:57]     "exeErrorCode": 0,
[2025-06-05 09:51:57]     "exeErrorDiag": "",
[2025-06-05 09:51:57]     "pilotErrorCode": 0,
[2025-06-05 09:51:57]     "pilotErrorDiag": "",
[2025-06-05 09:51:57]  *** Listing of results directory ***
[2025-06-05 09:51:57] total 396248
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-05 09:51:57] -rwx------. 1 boinc boinc     37140 Jun  4 07:50 runpilot2-wrapper.sh
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc      5111 Jun  4 07:51 queuedata.json
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:51:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:50 run_atlas
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:50 job.xml
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc      6392 Jun  5 00:50 init_data.xml
[2025-06-05 09:51:57] -rw-r--r--. 2 boinc boinc 214774825 Jun  5 00:50 EVNT.45006593._002148.pool.root.1
[2025-06-05 09:51:57] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:50 start_atlas.sh
[2025-06-05 09:51:57] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:50 shared
[2025-06-05 09:51:57] -rw-r--r--. 2 boinc boinc    508882 Jun  5 00:50 input.tar.gz
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:50 boinc_lockfile
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:43 pandaJob.out
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc    987117 Jun  5 01:43 agis_schedconf.cvmfs.json
[2025-06-05 09:51:57] drwx------. 4 boinc boinc      4096 Jun  5 01:43 pilot3
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc 183991813 Jun  5 05:35 HITS.45006595._053662.pool.root.1
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:35 boinc_task_state.xml
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc      1017 Jun  5 05:36 memory_monitor_summary.json
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc   1598969 Jun  5 05:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc    373779 Jun  5 05:36 log.45006595._053662.job.log.tgz.1
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc      7688 Jun  5 05:38 heartbeat.json
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc        95 Jun  5 05:38 pilot_heartbeat.json
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc      4725 Jun  5 05:38 pilotlog.txt
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc   1212355 Jun  5 05:38 log.45006595._053662.job.log.1
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc       357 Jun  5 05:38 output.list
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:38 runtime_log
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc   1607680 Jun  5 05:38 result.tar.gz
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc      8659 Jun  5 05:38 runtime_log.err
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc       657 Jun  5 05:38 nPyKDmpCwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0naKDmd1z0dn.diag
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc      8192 Jun  5 09:51 boinc_mmap_file
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc        28 Jun  5 09:51 wrapper_checkpoint.txt
[2025-06-05 09:51:57] -rw-r--r--. 1 boinc boinc     20517 Jun  5 09:51 stderr.txt
[2025-06-05 09:51:57] HITS file was successfully produced:
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc 183991813 Jun  5 05:35 shared/HITS.pool.root.1
[2025-06-05 09:51:57]  *** Contents of shared directory: ***
[2025-06-05 09:51:57] total 391512
[2025-06-05 09:51:57] -rw-r--r--. 2 boinc boinc 214774825 Jun  5 00:50 ATLAS.root_0
[2025-06-05 09:51:57] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:50 start_atlas.sh
[2025-06-05 09:51:57] -rw-r--r--. 2 boinc boinc    508882 Jun  5 00:50 input.tar.gz
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc 183991813 Jun  5 05:35 HITS.pool.root.1
[2025-06-05 09:51:57] -rw-------. 1 boinc boinc   1607680 Jun  5 05:38 result.tar.gz
09:51:59 (17556): run_atlas exited; CPU time 52335.176822
09:51:59 (17556): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN