Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:48:07 (1959760): wrapper (7.7.26015): starting
06:48:07 (1959760): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:48:07] Arguments: --nthreads 8
[2025-06-04 06:48:07] Threads: 8
[2025-06-04 06:48:07] Checking for CVMFS
[2025-06-04 06:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:48:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:48:08] 2.12.6.0 9255 31400 586576 146777 1 200 29791604 32947200 12568 16776704 1 168797584 99.662 144569498 26929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:48:08] CVMFS is ok
[2025-06-04 06:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:48:08] Further information can be found at the LHC@home message board.
[2025-06-04 06:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:48:08] Checking for apptainer binary...
[2025-06-04 06:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:48:08] Running /usr/bin/apptainer --version
[2025-06-04 06:48:08] apptainer version 1.4.1-1.el9
[2025-06-04 06:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:48:08] c6-6-8-1.aglt2.org
[2025-06-04 06:48:08] apptainer works
[2025-06-04 06:48:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:48:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:48:08] Starting ATLAS job with PandaID=6678286711
[2025-06-04 06:48:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:54:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:54:25]  is_altstaged=None
[2025-06-04 07:54:25]  is_tar=False
[2025-06-04 07:54:25]  lfn=log.45006595._051624.job.log.tgz.1
[2025-06-04 07:54:25]  mtime=0
[2025-06-04 07:54:25]  protocol_id=None
[2025-06-04 07:54:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:54:25]  replicas=None
[2025-06-04 07:54:25]  scope=mc23_13p6TeV
[2025-06-04 07:54:25]  status=None
[2025-06-04 07:54:25]  status_code=0
[2025-06-04 07:54:25]  storage_token=
[2025-06-04 07:54:25]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678286711/log.45006595._051624.job.log.tgz.1
[2025-06-04 07:54:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/6f/log.45006595._051624.job.log.tgz.1
[2025-06-04 07:54:25]  workdir=None
[2025-06-04 07:54:25] ]
[2025-06-04 07:54:25] 2025-06-04 11:54:08,518 | INFO     | transferring file log.45006595._051624.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678286711/log.45006595._051624.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:54:25] 2025-06-04 11:54:08,518 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678286711/log.45006595._051624.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._051624.job
[2025-06-04 07:54:25] 2025-06-04 11:54:08,535 | INFO     | adding to output.list: log.45006595._051624.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/6f/log.45006595._051624.job.log.tg
[2025-06-04 07:54:25] 2025-06-04 11:54:08,536 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:54:25] 2025-06-04 11:54:08,536 | INFO     | summary of transferred files:
[2025-06-04 07:54:25] 2025-06-04 11:54:08,537 | INFO     |  -- lfn=log.45006595._051624.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:54:25] 2025-06-04 11:54:08,537 | INFO     | stage-out finished correctly
[2025-06-04 07:54:25] 2025-06-04 11:54:08,753 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:54:25] 2025-06-04 11:54:08,920 | WARNING  | process 1971626 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:54:25] 2025-06-04 11:54:08,921 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678286711/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:54:25] 2025-06-04 11:54:09,084 | INFO     | job 6678286711 has state=finished
[2025-06-04 07:54:25] 2025-06-04 11:54:09,084 | INFO     | preparing for final server update for job 6678286711 in state='finished'
[2025-06-04 07:54:25] 2025-06-04 11:54:09,085 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:54:25] 2025-06-04 11:54:09,085 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:54:25] 2025-06-04 11:54:09,085 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:54:25] 2025-06-04 11:54:09,085 | INFO     | job 6678286711 has finished - writing final server update
[2025-06-04 07:54:25] 2025-06-04 11:54:09,085 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:54:25] 2025-06-04 11:54:09,104 | INFO     | executing command: lscpu
[2025-06-04 07:54:25] 2025-06-04 11:54:09,179 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:54:25] 2025-06-04 11:54:09,242 | INFO     | number of running child processes to parent process 1971626: 1
[2025-06-04 07:54:25] 2025-06-04 11:54:09,242 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:54:25] 2025-06-04 11:54:11,745 | INFO     | monitor loop #294: job 0:6678286711 is in state 'finished'
[2025-06-04 07:54:25] 2025-06-04 11:54:11,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:54:25] 2025-06-04 11:54:12,380 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:54:25] 2025-06-04 11:54:12,380 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678286711/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:54:25] 2025-06-04 11:54:12,381 | INFO     | extracted standard info from prmon json
[2025-06-04 07:54:25] 2025-06-04 11:54:12,381 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:54:25] 2025-06-04 11:54:12,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:54:25] 2025-06-04 11:54:12,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:54:25] 2025-06-04 11:54:12,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:54:25] 2025-06-04 11:54:12,383 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:54:25] 2025-06-04 11:54:12,383 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 07:54:25] 2025-06-04 11:54:12,383 | INFO     | sum of deviations: 5857565107.5
[2025-06-04 07:54:25] 2025-06-04 11:54:12,383 | INFO     | mean x: 1749036166.5
[2025-06-04 07:54:25] 2025-06-04 11:54:12,383 | INFO     | mean y: 2153243.1896551726
[2025-06-04 07:54:25] 2025-06-04 11:54:12,383 | INFO     | -- intersect: -169385842594.9787
[2025-06-04 07:54:25] 2025-06-04 11:54:12,383 | INFO     | intersect: -169385842594.9787
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | chi2: 0.8844387692422151
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | -- intersect: -169385842594.9787
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | current memory leak: 96.85 B/s (using 58 data points, chi2=0.88)
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | ..............................
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | . Timing measurements:
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | . get job = 0 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | . initial setup = 2 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | . payload setup = 6 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,384 | INFO     | . stage-in = 0 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,385 | INFO     | . payload execution = 3924 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,385 | INFO     | . stage-out = 0 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,385 | INFO     | . log creation = 0 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,385 | INFO     | ..............................
[2025-06-04 07:54:25] 2025-06-04 11:54:12,471 | INFO     | 
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | job summary report
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | --------------------------------------------------
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | PanDA job id: 6678286711
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | task id: 45006595
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | errors: (none)
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | pilot state: finished 
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | transexitcode: 0
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | exeerrorcode: 0
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | exeerrordiag: 
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | exitcode: 0
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | exitmsg: OK
[2025-06-04 07:54:25] 2025-06-04 11:54:12,472 | INFO     | cpuconsumptiontime: 26258 s
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | nevents: 400
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | neventsw: 0
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | pid: 1971626
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | pgrp: 1971626
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | corecount: 8
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | event service: False
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 3934: 2431213, 3936: 2440338, 3940: 2440452}
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | --------------------------------------------------
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | 
[2025-06-04 07:54:25] 2025-06-04 11:54:12,473 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | job 6678286711 has completed (purged errors)
[2025-06-04 07:54:25] 2025-06-04 11:54:12,489 | INFO     | overall cleanup function is called
[2025-06-04 07:54:25] 2025-06-04 11:54:13,497 | INFO     | --- collectZombieJob: --- 10, [1971626]
[2025-06-04 07:54:25] 2025-06-04 11:54:13,498 | INFO     | zombie collector waiting for pid 1971626
[2025-06-04 07:54:25] 2025-06-04 11:54:13,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:54:25] 2025-06-04 11:54:13,498 | INFO     | collected zombie processes
[2025-06-04 07:54:25] 2025-06-04 11:54:13,498 | INFO     | will attempt to kill all subprocesses of pid=1971626
[2025-06-04 07:54:25] 2025-06-04 11:54:13,681 | INFO     | PID=1963382 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 07:54:25] 2025-06-04 11:54:13,681 | INFO     | .. there are 15 such processes running
[2025-06-04 07:54:25] 2025-06-04 11:54:13,889 | INFO     | process IDs to be killed: [1971626] (in reverse order)
[2025-06-04 07:54:25] 2025-06-04 11:54:13,950 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:54:25] 2025-06-04 11:54:13,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:54:25] 2025-06-04 11:54:13,961 | INFO     | did not find any defunct processes belonging to 1971626
[2025-06-04 07:54:25] 2025-06-04 11:54:13,972 | INFO     | did not find any defunct processes belonging to 1971626
[2025-06-04 07:54:25] 2025-06-04 11:54:13,972 | INFO     | ready for new job
[2025-06-04 07:54:25] 2025-06-04 11:54:13,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:54:25] 2025-06-04 11:54:13,974 | INFO     | **************************************
[2025-06-04 07:54:25] 2025-06-04 11:54:13,974 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:54:25] 2025-06-04 11:54:13,974 | INFO     | **************************************
[2025-06-04 07:54:25] 2025-06-04 11:54:13,974 | INFO     | 
[2025-06-04 07:54:25] 2025-06-04 11:54:13,991 | INFO     | architecture information:
[2025-06-04 07:54:25] 2025-06-04 11:54:13,992 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:54:25] 2025-06-04 11:54:14,003 | INFO     | cat /etc/os-release:
[2025-06-04 07:54:25] NAME="CentOS Linux"
[2025-06-04 07:54:25] VERSION="7 (Core)"
[2025-06-04 07:54:25] ID="centos"
[2025-06-04 07:54:25] ID_LIKE="rhel fedora"
[2025-06-04 07:54:25] VERSION_ID="7"
[2025-06-04 07:54:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:54:25] ANSI_COLOR="0;31"
[2025-06-04 07:54:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:54:25] HOME_URL="https://www.centos.org/"
[2025-06-04 07:54:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:54:25] 
[2025-06-04 07:54:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:54:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:54:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:54:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:54:25] 
[2025-06-04 07:54:25] 2025-06-04 11:54:14,003 | INFO     | **************************************
[2025-06-04 07:54:25] 2025-06-04 11:54:14,506 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 07:54:25] 2025-06-04 11:54:14,527 | INFO     | sufficient remaining disk space (75214356480 B)
[2025-06-04 07:54:25] 2025-06-04 11:54:14,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:54:25] 2025-06-04 11:54:14,528 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:54:25] 2025-06-04 11:54:14,528 | INFO     | update_server=False
[2025-06-04 07:54:25] 2025-06-04 11:54:14,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:54:25] 2025-06-04 11:54:14,528 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:54:25] 2025-06-04 11:54:14,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:54:25] 2025-06-04 11:54:14,529 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:54:25] 2025-06-04 11:54:14,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:54:25] 2025-06-04 11:54:14,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:54:25] 2025-06-04 11:54:14,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:54:25] 2025-06-04 11:54:14,933 | INFO     | all data control threads have been joined
[2025-06-04 07:54:25] 2025-06-04 11:54:14,937 | INFO     | all job control threads have been joined
[2025-06-04 07:54:25] 2025-06-04 11:54:15,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:54:25] 2025-06-04 11:54:15,254 | INFO     | aborting loop
[2025-06-04 07:54:25] 2025-06-04 11:54:15,331 | INFO     | all payload control threads have been joined
[2025-06-04 07:54:25] 2025-06-04 11:54:15,533 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:15,794 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:15,839 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:15,939 | INFO     | [data] control thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:15,942 | INFO     | [job] control thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:15,946 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,259 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,337 | INFO     | [payload] control thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,393 | INFO     | [job] validate thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,533 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,625 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,718 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:16,873 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:17,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:54:25] 2025-06-04 11:54:18,478 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:18,865 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:54:25] 2025-06-04 11:54:19,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794847921984)>', '<ExcThread(monitor, started 139793996441344)>']
[2025-06-04 07:54:25] 2025-06-04 11:54:20,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:54:25] 2025-06-04 11:54:20,560 | INFO     | [monitor] control thread has ended
[2025-06-04 07:54:25] 2025-06-04 11:54:24,829 | INFO     | all workflow threads have been joined
[2025-06-04 07:54:25] 2025-06-04 11:54:24,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:54:25] 2025-06-04 11:54:24,830 | INFO     | traces error code: 0
[2025-06-04 07:54:25] 2025-06-04 11:54:24,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:54:25] 2025-06-04 11:54:24,968 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:54:25] 2025-06-04 11:54:24,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:54:25] 2025-06-04 11:54:24,973 [wrapper] pilotpid: 1963382
[2025-06-04 07:54:25] 2025-06-04 11:54:24,975 [wrapper] Pilot exit status: 0
[2025-06-04 07:54:25] 2025-06-04 11:54:24,982 [wrapper] pandaids: 6678286711
[2025-06-04 07:54:25] 2025-06-04 11:54:25,026 [wrapper] cleanup supervisor_pilot 2163379 1963383
[2025-06-04 07:54:25] 2025-06-04 11:54:25,029 [wrapper] Test setup, not cleaning
[2025-06-04 07:54:25] 2025-06-04 11:54:25,031 [wrapper] apfmon messages muted
[2025-06-04 07:54:25] 2025-06-04 11:54:25,033 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:54:25] 2025-06-04 11:54:25,035 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:54:25]  *** Error codes and diagnostics ***
[2025-06-04 07:54:25]     "exeErrorCode": 0,
[2025-06-04 07:54:25]     "exeErrorDiag": "",
[2025-06-04 07:54:25]     "pilotErrorCode": 0,
[2025-06-04 07:54:25]     "pilotErrorDiag": "",
[2025-06-04 07:54:25]  *** Listing of results directory ***
[2025-06-04 07:54:25] total 393124
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 07:54:25] -rwx------ 1 boincer umatlas     37140 Jun  3 23:26 runpilot2-wrapper.sh
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:26 queuedata.json
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:54:25] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:48 run_atlas
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:48 job.xml
[2025-06-04 07:54:25] -rw-r--r-- 2 boincer umatlas 214243484 Jun  4 06:48 EVNT.45006593._002068.pool.root.1
[2025-06-04 07:54:25] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:48 start_atlas.sh
[2025-06-04 07:54:25] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:48 shared
[2025-06-04 07:54:25] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:48 input.tar.gz
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:48 boinc_lockfile
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:48 pandaJob.out
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas    986812 Jun  4 06:48 agis_schedconf.cvmfs.json
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas   1603667 Jun  4 06:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:54:25] drwx------ 4 boincer umatlas      4096 Jun  4 06:48 pilot3
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas      6856 Jun  4 07:45 init_data.xml
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas 183069681 Jun  4 07:53 HITS.45006595._051624.pool.root.1
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:53 boinc_task_state.xml
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas        95 Jun  4 07:53 pilot_heartbeat.json
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas      1052 Jun  4 07:54 memory_monitor_summary.json
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas    307823 Jun  4 07:54 log.45006595._051624.job.log.tgz.1
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas      7720 Jun  4 07:54 heartbeat.json
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:54 wrapper_checkpoint.txt
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:54 boinc_mmap_file
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas      4476 Jun  4 07:54 pilotlog.txt
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas    396922 Jun  4 07:54 log.45006595._051624.job.log.1
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas       357 Jun  4 07:54 output.list
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:54 runtime_log
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas    727040 Jun  4 07:54 result.tar.gz
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 07:54 runtime_log.err
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas       651 Jun  4 07:54 NX1KDmLxtg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZdaKDmpuZqOn.diag
[2025-06-04 07:54:25] -rw-r--r-- 1 boincer umatlas     21513 Jun  4 07:54 stderr.txt
[2025-06-04 07:54:25] HITS file was successfully produced:
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas 183069681 Jun  4 07:53 shared/HITS.pool.root.1
[2025-06-04 07:54:25]  *** Contents of shared directory: ***
[2025-06-04 07:54:25] total 389236
[2025-06-04 07:54:25] -rw-r--r-- 2 boincer umatlas 214243484 Jun  4 06:48 ATLAS.root_0
[2025-06-04 07:54:25] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:48 start_atlas.sh
[2025-06-04 07:54:25] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:48 input.tar.gz
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas 183069681 Jun  4 07:53 HITS.pool.root.1
[2025-06-04 07:54:25] -rw------- 1 boincer umatlas    727040 Jun  4 07:54 result.tar.gz
07:54:27 (1959760): run_atlas exited; CPU time 26412.158460
07:54:27 (1959760): called boinc_finish(0)

</stderr_txt>
]]>

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