Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:28:39 (3668561): wrapper (7.7.26015): starting
07:28:39 (3668561): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 07:28:39] Arguments: --nthreads 12
[2025-06-04 07:28:39] Threads: 12
[2025-06-04 07:28:39] Checking for CVMFS
[2025-06-04 07:28:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:28:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:28:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:28:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:28:39] 2.12.6.0 2658689 23212 487436 146779 2 66 24422704 32935937 3757 16776704 1 93510738 99.586 116763270 34455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:28:39] CVMFS is ok
[2025-06-04 07:28:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:28:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:28:39] Further information can be found at the LHC@home message board.
[2025-06-04 07:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:28:39] Checking for apptainer binary...
[2025-06-04 07:28:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:28:39] Running /usr/bin/apptainer --version
[2025-06-04 07:28:39] apptainer version 1.4.1-1.el9
[2025-06-04 07:28:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:28:39] c6-5-7-2.aglt2.org
[2025-06-04 07:28:39] apptainer works
[2025-06-04 07:28:39] Set ATHENA_PROC_NUMBER=12
[2025-06-04 07:28:39] Set ATHENA_CORE_NUMBER=12
[2025-06-04 07:28:39] Starting ATLAS job with PandaID=6677546822
[2025-06-04 07:28:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:07:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:07:04]  filesize=335372
[2025-06-04 08:07:04]  filetype=log
[2025-06-04 08:07:04]  guid=d6b2fb32-2a3d-4cd9-b1b7-1838fe51eb43
[2025-06-04 08:07:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:07:04]  is_altstaged=None
[2025-06-04 08:07:04]  is_tar=False
[2025-06-04 08:07:04]  lfn=log.45006595._025925.job.log.tgz.1
[2025-06-04 08:07:04]  mtime=0
[2025-06-04 08:07:04]  protocol_id=None
[2025-06-04 08:07:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:07:04]  replicas=None
[2025-06-04 08:07:04]  scope=mc23_13p6TeV
[2025-06-04 08:07:04]  status=None
[2025-06-04 08:07:04]  status_code=0
[2025-06-04 08:07:04]  storage_token=
[2025-06-04 08:07:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677546822/log.45006595._025925.job.log.tgz.1
[2025-06-04 08:07:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/79/log.45006595._025925.job.log.tgz.1
[2025-06-04 08:07:04]  workdir=None
[2025-06-04 08:07:04] ]
[2025-06-04 08:07:04] 2025-06-04 12:06:45,738 | INFO     | transferring file log.45006595._025925.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677546822/log.45006595._025925.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:07:04] 2025-06-04 12:06:45,738 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677546822/log.45006595._025925.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._025925.job
[2025-06-04 08:07:04] 2025-06-04 12:06:45,749 | INFO     | adding to output.list: log.45006595._025925.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/79/log.45006595._025925.job.log.tg
[2025-06-04 08:07:04] 2025-06-04 12:06:45,750 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:07:04] 2025-06-04 12:06:45,750 | INFO     | summary of transferred files:
[2025-06-04 08:07:04] 2025-06-04 12:06:45,750 | INFO     |  -- lfn=log.45006595._025925.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:07:04] 2025-06-04 12:06:45,750 | INFO     | stage-out finished correctly
[2025-06-04 08:07:04] 2025-06-04 12:06:47,338 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:07:04] 2025-06-04 12:06:48,072 | INFO     | job 6677546822 has state=finished
[2025-06-04 08:07:04] 2025-06-04 12:06:48,072 | INFO     | preparing for final server update for job 6677546822 in state='finished'
[2025-06-04 08:07:04] 2025-06-04 12:06:48,072 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:07:04] 2025-06-04 12:06:48,072 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:07:04] 2025-06-04 12:06:48,072 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:07:04] 2025-06-04 12:06:48,072 | INFO     | job 6677546822 has finished - writing final server update
[2025-06-04 08:07:04] 2025-06-04 12:06:48,073 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:07:04] 2025-06-04 12:06:48,087 | INFO     | executing command: lscpu
[2025-06-04 08:07:04] 2025-06-04 12:06:48,143 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:07:04] 2025-06-04 12:06:50,557 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:07:04] 2025-06-04 12:06:50,558 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677546822/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:07:04] 2025-06-04 12:06:50,559 | INFO     | extracted standard info from prmon json
[2025-06-04 08:07:04] 2025-06-04 12:06:50,559 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:07:04] 2025-06-04 12:06:50,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:07:04] 2025-06-04 12:06:50,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:07:04] 2025-06-04 12:06:50,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:07:04] 2025-06-04 12:06:50,560 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | sum of square deviations: 9228080.0
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | sum of deviations: 4093817360.000001
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | mean x: 1749037767.0
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | mean y: 2655656.6774193547
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | -- intersect: -775916189199.483
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | intersect: -775916189199.483
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | chi2: 0.5889437513813058
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | -- intersect: -775916189199.483
[2025-06-04 08:07:04] 2025-06-04 12:06:50,561 | INFO     | current memory leak: 443.63 B/s (using 31 data points, chi2=0.59)
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | ..............................
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . Timing measurements:
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . get job = 0 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . initial setup = 2 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . payload setup = 4 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . stage-in = 0 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . payload execution = 2259 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . stage-out = 0 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | . log creation = 0 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,562 | INFO     | ..............................
[2025-06-04 08:07:04] 2025-06-04 12:06:50,809 | INFO     | 
[2025-06-04 08:07:04] 2025-06-04 12:06:50,809 | INFO     | job summary report
[2025-06-04 08:07:04] 2025-06-04 12:06:50,809 | INFO     | --------------------------------------------------
[2025-06-04 08:07:04] 2025-06-04 12:06:50,809 | INFO     | PanDA job id: 6677546822
[2025-06-04 08:07:04] 2025-06-04 12:06:50,809 | INFO     | task id: 45006595
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | errors: (none)
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | pilot state: finished 
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | transexitcode: 0
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | exeerrorcode: 0
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | exeerrordiag: 
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | exitcode: 0
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | exitmsg: OK
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | cpuconsumptiontime: 19922 s
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | nevents: 400
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | neventsw: 0
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | pid: 3680562
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | pgrp: 3680562
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | corecount: 12
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | event service: False
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | sizes: {0: 2405133, 3: 2405339, 11: 2405367, 2264: 2430403, 2265: 2430402, 2266: 2439399, 2267: 2439583, 2271: 2439753}
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | --------------------------------------------------
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | 
[2025-06-04 08:07:04] 2025-06-04 12:06:50,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:07:04] 2025-06-04 12:06:50,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | job 6677546822 has completed (purged errors)
[2025-06-04 08:07:04] 2025-06-04 12:06:50,824 | INFO     | overall cleanup function is called
[2025-06-04 08:07:04] 2025-06-04 12:06:51,831 | INFO     | --- collectZombieJob: --- 10, [3680562]
[2025-06-04 08:07:04] 2025-06-04 12:06:51,831 | INFO     | zombie collector waiting for pid 3680562
[2025-06-04 08:07:04] 2025-06-04 12:06:51,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:07:04] 2025-06-04 12:06:51,832 | INFO     | collected zombie processes
[2025-06-04 08:07:04] 2025-06-04 12:06:51,832 | INFO     | will attempt to kill all subprocesses of pid=3680562
[2025-06-04 08:07:04] 2025-06-04 12:06:51,958 | INFO     | process IDs to be killed: [3680562] (in reverse order)
[2025-06-04 08:07:04] 2025-06-04 12:06:52,006 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:07:04] 2025-06-04 12:06:52,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:07:04] 2025-06-04 12:06:52,011 | INFO     | did not find any defunct processes belonging to 3680562
[2025-06-04 08:07:04] 2025-06-04 12:06:52,016 | INFO     | did not find any defunct processes belonging to 3680562
[2025-06-04 08:07:04] 2025-06-04 12:06:52,016 | INFO     | ready for new job
[2025-06-04 08:07:04] 2025-06-04 12:06:52,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:07:04] 2025-06-04 12:06:52,017 | INFO     | **************************************
[2025-06-04 08:07:04] 2025-06-04 12:06:52,018 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:07:04] 2025-06-04 12:06:52,018 | INFO     | **************************************
[2025-06-04 08:07:04] 2025-06-04 12:06:52,018 | INFO     | 
[2025-06-04 08:07:04] 2025-06-04 12:06:52,032 | INFO     | architecture information:
[2025-06-04 08:07:04] 2025-06-04 12:06:52,032 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:07:04] 2025-06-04 12:06:52,042 | INFO     | cat /etc/os-release:
[2025-06-04 08:07:04] NAME="CentOS Linux"
[2025-06-04 08:07:04] VERSION="7 (Core)"
[2025-06-04 08:07:04] ID="centos"
[2025-06-04 08:07:04] ID_LIKE="rhel fedora"
[2025-06-04 08:07:04] VERSION_ID="7"
[2025-06-04 08:07:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:07:04] ANSI_COLOR="0;31"
[2025-06-04 08:07:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:07:04] HOME_URL="https://www.centos.org/"
[2025-06-04 08:07:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:07:04] 
[2025-06-04 08:07:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:07:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:07:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:07:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:07:04] 
[2025-06-04 08:07:04] 2025-06-04 12:06:52,042 | INFO     | **************************************
[2025-06-04 08:07:04] 2025-06-04 12:06:52,545 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:07:04] 2025-06-04 12:06:52,555 | INFO     | sufficient remaining disk space (76359401472 B)
[2025-06-04 08:07:04] 2025-06-04 12:06:52,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:07:04] 2025-06-04 12:06:52,556 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:07:04] 2025-06-04 12:06:52,556 | INFO     | update_server=False
[2025-06-04 08:07:04] 2025-06-04 12:06:52,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:07:04] 2025-06-04 12:06:52,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:07:04] 2025-06-04 12:06:53,289 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:07:04] 2025-06-04 12:06:53,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:07:04] 2025-06-04 12:06:53,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:07:04] 2025-06-04 12:06:53,311 | INFO     | all job control threads have been joined
[2025-06-04 08:07:04] 2025-06-04 12:06:53,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:07:04] 2025-06-04 12:06:53,404 | INFO     | all data control threads have been joined
[2025-06-04 08:07:04] 2025-06-04 12:06:53,481 | INFO     | all payload control threads have been joined
[2025-06-04 08:07:04] 2025-06-04 12:06:53,560 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:53,561 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:53,774 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:53,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:07:04] 2025-06-04 12:06:54,137 | WARNING  | process 3680562 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:07:04] 2025-06-04 12:06:54,245 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:07:04] 2025-06-04 12:06:54,313 | INFO     | [job] control thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:54,370 | INFO     | number of running child processes to parent process 3680562: 1
[2025-06-04 08:07:04] 2025-06-04 12:06:54,371 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:07:04] 2025-06-04 12:06:54,371 | INFO     | aborting job monitoring since job object (job id=6677546822) has expired
[2025-06-04 08:07:04] 2025-06-04 12:06:54,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:07:04] 2025-06-04 12:06:54,371 | INFO     | will abort loop
[2025-06-04 08:07:04] 2025-06-04 12:06:54,409 | INFO     | [data] control thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:54,486 | INFO     | [payload] control thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:54,551 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:54,774 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:54,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:54,873 | INFO     | [job] validate thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:54,903 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:55,005 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:55,030 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:55,376 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:55,813 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:57,393 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:07:04] 2025-06-04 12:06:58,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412900894528)>', '<ExcThread(monitor, started 140412136187648)>']
[2025-06-04 08:07:04] 2025-06-04 12:06:59,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:07:04] 2025-06-04 12:06:59,314 | INFO     | [monitor] control thread has ended
[2025-06-04 08:07:04] 2025-06-04 12:07:03,985 | INFO     | all workflow threads have been joined
[2025-06-04 08:07:04] 2025-06-04 12:07:03,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:07:04] 2025-06-04 12:07:03,986 | INFO     | traces error code: 0
[2025-06-04 08:07:04] 2025-06-04 12:07:03,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:07:04] 2025-06-04 12:07:04,075 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:07:04] 2025-06-04 12:07:04,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:07:04] 2025-06-04 12:07:04,079 [wrapper] pilotpid: 3672195
[2025-06-04 08:07:04] 2025-06-04 12:07:04,081 [wrapper] Pilot exit status: 0
[2025-06-04 08:07:04] 2025-06-04 12:07:04,087 [wrapper] pandaids: 6677546822
[2025-06-04 08:07:04] 2025-06-04 12:07:04,121 [wrapper] cleanup supervisor_pilot 3728775 3672196
[2025-06-04 08:07:04] 2025-06-04 12:07:04,123 [wrapper] Test setup, not cleaning
[2025-06-04 08:07:04] 2025-06-04 12:07:04,125 [wrapper] apfmon messages muted
[2025-06-04 08:07:04] 2025-06-04 12:07:04,127 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:07:04] 2025-06-04 12:07:04,129 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:07:04]  *** Error codes and diagnostics ***
[2025-06-04 08:07:04]     "exeErrorCode": 0,
[2025-06-04 08:07:04]     "exeErrorDiag": "",
[2025-06-04 08:07:04]     "pilotErrorCode": 0,
[2025-06-04 08:07:04]     "pilotErrorDiag": "",
[2025-06-04 08:07:04]  *** Listing of results directory ***
[2025-06-04 08:07:04] total 394976
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 04:43 pilot3.tar.gz
[2025-06-04 08:07:04] -rwx------. 1 boincer umatlas     37140 Jun  3 04:44 runpilot2-wrapper.sh
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 04:44 queuedata.json
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:07:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:28 run_atlas
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:28 job.xml
[2025-06-04 08:07:04] -rw-r--r--. 2 boincer umatlas 217402373 Jun  4 07:28 EVNT.45006593._001037.pool.root.1
[2025-06-04 08:07:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:28 start_atlas.sh
[2025-06-04 08:07:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:28 shared
[2025-06-04 08:07:04] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 07:28 input.tar.gz
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:28 boinc_lockfile
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 07:28 pandaJob.out
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas    986812 Jun  4 07:28 agis_schedconf.cvmfs.json
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:07:04] drwx------. 4 boincer umatlas      4096 Jun  4 07:28 pilot3
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 08:05 init_data.xml
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas        95 Jun  4 08:06 pilot_heartbeat.json
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas 182040554 Jun  4 08:06 HITS.45006595._025925.pool.root.1
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:06 boinc_task_state.xml
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas      1027 Jun  4 08:06 memory_monitor_summary.json
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas    335372 Jun  4 08:06 log.45006595._025925.job.log.tgz.1
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas      7704 Jun  4 08:06 heartbeat.json
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:06 boinc_mmap_file
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:06 wrapper_checkpoint.txt
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas      4874 Jun  4 08:07 pilotlog.txt
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas    254843 Jun  4 08:07 log.45006595._025925.job.log.1
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas       357 Jun  4 08:07 output.list
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:07 runtime_log
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas    614400 Jun  4 08:07 result.tar.gz
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas      8661 Jun  4 08:07 runtime_log.err
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas       648 Jun  4 08:07 nV2MDmTRcg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1ziKDmgA5tTn.diag
[2025-06-04 08:07:04] -rw-r--r--. 1 boincer umatlas     21143 Jun  4 08:07 stderr.txt
[2025-06-04 08:07:04] HITS file was successfully produced:
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas 182040554 Jun  4 08:06 shared/HITS.pool.root.1
[2025-06-04 08:07:04]  *** Contents of shared directory: ***
[2025-06-04 08:07:04] total 391200
[2025-06-04 08:07:04] -rw-r--r--. 2 boincer umatlas 217402373 Jun  4 07:28 ATLAS.root_0
[2025-06-04 08:07:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:28 start_atlas.sh
[2025-06-04 08:07:04] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 07:28 input.tar.gz
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas 182040554 Jun  4 08:06 HITS.pool.root.1
[2025-06-04 08:07:04] -rw-------. 1 boincer umatlas    614400 Jun  4 08:07 result.tar.gz
08:07:05 (3668561): run_atlas exited; CPU time 19943.275160
08:07:05 (3668561): called boinc_finish(0)

</stderr_txt>
]]>

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