Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:51:10 (1387404): wrapper (7.7.26015): starting
00:51:10 (1387404): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 00:51:10] Arguments: --nthreads 12
[2025-06-06 00:51:10] Threads: 12
[2025-06-06 00:51:10] Checking for CVMFS
[2025-06-06 00:51:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:51:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:51:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:51:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:51:14] 2.12.7.0 16016 3924 62892 146837 2 56 2613431 4096000 912 130560 0 3709440 99.992 946441 138 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 00:51:14] CVMFS is ok
[2025-06-06 00:51:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:51:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 00:51:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 00:51:14] Further information can be found at the LHC@home message board.
[2025-06-06 00:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:51:14] Checking for apptainer binary...
[2025-06-06 00:51:14] apptainer is not installed, using version from CVMFS
[2025-06-06 00:51:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:51:15] g3250
[2025-06-06 00:51:15] apptainer works
[2025-06-06 00:51:15] Set ATHENA_PROC_NUMBER=12
[2025-06-06 00:51:15] Set ATHENA_CORE_NUMBER=12
[2025-06-06 00:51:15] Starting ATLAS job with PandaID=6678363780
[2025-06-06 00:51:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:46:52]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:46:52] 2025-06-06 03:46:35,479 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6678363780/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,479 | INFO     | extracted standard info from prmon json
[2025-06-06 03:46:52] 2025-06-06 03:46:35,479 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:46:52] 2025-06-06 03:46:35,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:46:52] 2025-06-06 03:46:35,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:46:52] 2025-06-06 03:46:35,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:46:52] 2025-06-06 03:46:35,483 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:46:52] 2025-06-06 03:46:35,483 | INFO     | sum of square deviations: 1496652324.9940875
[2025-06-06 03:46:52] 2025-06-06 03:46:35,484 | INFO     | sum of deviations: 6746818396.301781
[2025-06-06 03:46:52] 2025-06-06 03:46:35,484 | INFO     | mean x: 1749176405.005917
[2025-06-06 03:46:52] 2025-06-06 03:46:35,484 | INFO     | mean y: 2638721.698224852
[2025-06-06 03:46:52] 2025-06-06 03:46:35,485 | INFO     | -- intersect: -7882542993.913353
[2025-06-06 03:46:52] 2025-06-06 03:46:35,485 | INFO     | intersect: -7882542993.913353
[2025-06-06 03:46:52] 2025-06-06 03:46:35,485 | INFO     | chi2: 3.402857439145981
[2025-06-06 03:46:52] 2025-06-06 03:46:35,485 | INFO     | sum of square deviations: 1367701374.9939044
[2025-06-06 03:46:52] 2025-06-06 03:46:35,486 | INFO     | sum of deviations: 19816024133.359737
[2025-06-06 03:46:52] 2025-06-06 03:46:35,486 | INFO     | mean x: 1749176252.5060976
[2025-06-06 03:46:52] 2025-06-06 03:46:35,486 | INFO     | mean y: 2653796.1402439023
[2025-06-06 03:46:52] 2025-06-06 03:46:35,494 | INFO     | -- intersect: -25340392183.699512
[2025-06-06 03:46:52] 2025-06-06 03:46:35,495 | INFO     | intersect: -25340392183.699512
[2025-06-06 03:46:52] 2025-06-06 03:46:35,495 | INFO     | chi2: 2.4341763091023556
[2025-06-06 03:46:52] 2025-06-06 03:46:35,495 | INFO     | current chi2=2.4341763091023556 (change=28.466697396724804 %)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,495 | INFO     | sum of square deviations: 1246378474.9937139
[2025-06-06 03:46:52] 2025-06-06 03:46:35,496 | INFO     | sum of deviations: 19305200924.15095
[2025-06-06 03:46:52] 2025-06-06 03:46:35,496 | INFO     | mean x: 1749176100.0062892
[2025-06-06 03:46:52] 2025-06-06 03:46:35,496 | INFO     | mean y: 2653153.849056604
[2025-06-06 03:46:52] 2025-06-06 03:46:35,496 | INFO     | -- intersect: -27090398226.482655
[2025-06-06 03:46:52] 2025-06-06 03:46:35,497 | INFO     | intersect: -27090398226.482655
[2025-06-06 03:46:52] 2025-06-06 03:46:35,497 | INFO     | chi2: 2.4376341352576505
[2025-06-06 03:46:52] 2025-06-06 03:46:35,497 | INFO     | current chi2=2.4376341352576505 (change=-0.14205323346401386 %)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,497 | INFO     | right removable region: 158
[2025-06-06 03:46:52] 2025-06-06 03:46:35,497 | INFO     | sum of square deviations: 1367700764.9939044
[2025-06-06 03:46:52] 2025-06-06 03:46:35,498 | INFO     | sum of deviations: -31290808291.40853
[2025-06-06 03:46:52] 2025-06-06 03:46:35,498 | INFO     | mean x: 1749176557.5060976
[2025-06-06 03:46:52] 2025-06-06 03:46:35,502 | INFO     | mean y: 2683319.9085365855
[2025-06-06 03:46:52] 2025-06-06 03:46:35,503 | INFO     | -- intersect: 40021048250.042336
[2025-06-06 03:46:52] 2025-06-06 03:46:35,503 | INFO     | intersect: 40021048250.042336
[2025-06-06 03:46:52] 2025-06-06 03:46:35,503 | INFO     | chi2: 1.2778903469508638
[2025-06-06 03:46:52] 2025-06-06 03:46:35,503 | INFO     | current chi2=1.2778903469508638 (change=62.44655058862597 %)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,503 | INFO     | sum of square deviations: 1246377254.9937139
[2025-06-06 03:46:52] 2025-06-06 03:46:35,504 | INFO     | sum of deviations: -35359052913.484276
[2025-06-06 03:46:52] 2025-06-06 03:46:35,504 | INFO     | mean x: 1749176710.0062892
[2025-06-06 03:46:52] 2025-06-06 03:46:35,504 | INFO     | mean y: 2688339.4842767296
[2025-06-06 03:46:52] 2025-06-06 03:46:35,504 | INFO     | -- intersect: 49625891584.20223
[2025-06-06 03:46:52] 2025-06-06 03:46:35,505 | INFO     | intersect: 49625891584.20223
[2025-06-06 03:46:52] 2025-06-06 03:46:35,505 | INFO     | chi2: 1.213988215765337
[2025-06-06 03:46:52] 2025-06-06 03:46:35,505 | INFO     | current chi2=1.213988215765337 (change=5.000595813091613 %)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,505 | INFO     | left removable region: 20
[2025-06-06 03:46:52] 2025-06-06 03:46:35,505 | INFO     | sum of square deviations: 814878534.5
[2025-06-06 03:46:52] 2025-06-06 03:46:35,506 | INFO     | sum of deviations: -6101261266.5
[2025-06-06 03:46:52] 2025-06-06 03:46:35,506 | INFO     | mean x: 1749176679.5
[2025-06-06 03:46:52] 2025-06-06 03:46:35,506 | INFO     | mean y: 2683372.731884058
[2025-06-06 03:46:52] 2025-06-06 03:46:35,506 | INFO     | -- intersect: 13099339464.485193
[2025-06-06 03:46:52] 2025-06-06 03:46:35,510 | INFO     | intersect: 13099339464.485193
[2025-06-06 03:46:52] 2025-06-06 03:46:35,511 | INFO     | chi2: 0.08421297060439321
[2025-06-06 03:46:52] 2025-06-06 03:46:35,511 | INFO     | -- intersect: 13099339464.485193
[2025-06-06 03:46:52] 2025-06-06 03:46:35,511 | INFO     | current memory leak: -7.49 B/s (using 138 data points, chi2=0.08)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,511 | INFO     | ..............................
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . Timing measurements:
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . get job = 0 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . initial setup = 3 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . payload setup = 50 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . stage-in = 0 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . payload execution = 10276 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . stage-out = 1 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | . log creation = 0 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,512 | INFO     | ..............................
[2025-06-06 03:46:52] 2025-06-06 03:46:35,718 | INFO     | 
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | job summary report
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | --------------------------------------------------
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | PanDA job id: 6678363780
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | task id: 45006595
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | errors: (none)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | pilot state: finished 
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | transexitcode: 0
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | exeerrorcode: 0
[2025-06-06 03:46:52] 2025-06-06 03:46:35,719 | INFO     | exeerrordiag: 
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | exitcode: 0
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | exitmsg: OK
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | cpuconsumptiontime: 36986 s
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | nevents: 400
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | neventsw: 0
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | pid: 1397481
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | pgrp: 1397481
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | corecount: 12
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | event service: False
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | sizes: {0: 2396513, 1: 2397221, 2: 2397420, 13: 2397420, 23: 2397476, 31: 2397710, 34: 2397866, 10330: 2426273, 10333: 2435260, 10334: 2435316, 10393: 2435486}
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | --------------------------------------------------
[2025-06-06 03:46:52] 2025-06-06 03:46:35,720 | INFO     | 
[2025-06-06 03:46:52] 2025-06-06 03:46:35,721 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 03:46:52] 2025-06-06 03:46:35,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,757 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:46:52] 2025-06-06 03:46:35,757 | INFO     | job 6678363780 has completed (purged errors)
[2025-06-06 03:46:52] 2025-06-06 03:46:35,757 | INFO     | overall cleanup function is called
[2025-06-06 03:46:52] 2025-06-06 03:46:36,766 | INFO     | --- collectZombieJob: --- 10, [1397481]
[2025-06-06 03:46:52] 2025-06-06 03:46:36,767 | INFO     | zombie collector waiting for pid 1397481
[2025-06-06 03:46:52] 2025-06-06 03:46:36,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:46:52] 2025-06-06 03:46:36,767 | INFO     | collected zombie processes
[2025-06-06 03:46:52] 2025-06-06 03:46:36,767 | INFO     | will attempt to kill all subprocesses of pid=1397481
[2025-06-06 03:46:52] 2025-06-06 03:46:36,894 | INFO     | process IDs to be killed: [1397481] (in reverse order)
[2025-06-06 03:46:52] 2025-06-06 03:46:37,047 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:46:52] 2025-06-06 03:46:37,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:46:52] 2025-06-06 03:46:37,049 | INFO     | did not find any defunct processes belonging to 1397481
[2025-06-06 03:46:52] 2025-06-06 03:46:37,054 | INFO     | did not find any defunct processes belonging to 1397481
[2025-06-06 03:46:52] 2025-06-06 03:46:37,055 | INFO     | ready for new job
[2025-06-06 03:46:52] 2025-06-06 03:46:37,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:46:52] 2025-06-06 03:46:37,056 | INFO     | **************************************
[2025-06-06 03:46:52] 2025-06-06 03:46:37,056 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:46:52] 2025-06-06 03:46:37,056 | INFO     | **************************************
[2025-06-06 03:46:52] 2025-06-06 03:46:37,056 | INFO     | 
[2025-06-06 03:46:52] 2025-06-06 03:46:37,075 | INFO     | architecture information:
[2025-06-06 03:46:52] 2025-06-06 03:46:37,082 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:46:52] 2025-06-06 03:46:37,135 | INFO     | cat /etc/os-release:
[2025-06-06 03:46:52] NAME="CentOS Linux"
[2025-06-06 03:46:52] VERSION="7 (Core)"
[2025-06-06 03:46:52] ID="centos"
[2025-06-06 03:46:52] ID_LIKE="rhel fedora"
[2025-06-06 03:46:52] VERSION_ID="7"
[2025-06-06 03:46:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:46:52] ANSI_COLOR="0;31"
[2025-06-06 03:46:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:46:52] HOME_URL="https://www.centos.org/"
[2025-06-06 03:46:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:46:52] 
[2025-06-06 03:46:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:46:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:46:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:46:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:46:52] 
[2025-06-06 03:46:52] 2025-06-06 03:46:37,135 | INFO     | **************************************
[2025-06-06 03:46:52] 2025-06-06 03:46:37,639 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 03:46:52] 2025-06-06 03:46:37,667 | INFO     | sufficient remaining disk space (31033655296 B)
[2025-06-06 03:46:52] 2025-06-06 03:46:37,667 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:46:52] 2025-06-06 03:46:37,667 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:46:52] 2025-06-06 03:46:37,667 | INFO     | update_server=False
[2025-06-06 03:46:52] 2025-06-06 03:46:37,667 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:46:52] 2025-06-06 03:46:37,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:46:52] 2025-06-06 03:46:37,668 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 03:46:52] 2025-06-06 03:46:37,668 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:46:52] 2025-06-06 03:46:37,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:46:52] 2025-06-06 03:46:37,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:46:52] 2025-06-06 03:46:38,470 | INFO     | all data control threads have been joined
[2025-06-06 03:46:52] 2025-06-06 03:46:38,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:46:52] 2025-06-06 03:46:38,527 | INFO     | aborting loop
[2025-06-06 03:46:52] 2025-06-06 03:46:38,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:46:52] 2025-06-06 03:46:38,671 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:38,671 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:38,692 | INFO     | all payload control threads have been joined
[2025-06-06 03:46:52] 2025-06-06 03:46:38,923 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:39,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:39,398 | INFO     | all job control threads have been joined
[2025-06-06 03:46:52] 2025-06-06 03:46:39,479 | INFO     | [data] control thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:39,486 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:39,531 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:39,698 | INFO     | [payload] control thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:39,819 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:39,858 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:40,027 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:40,028 | INFO     | [job] validate thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:40,042 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:40,402 | INFO     | [job] control thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:40,614 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:41,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:46:52] 2025-06-06 03:46:45,126 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:46:52] 2025-06-06 03:46:46,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321401018176)>', '<ExcThread(monitor, started 140320742307584)>']
[2025-06-06 03:46:52] 2025-06-06 03:46:46,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:46:52] 2025-06-06 03:46:46,711 | INFO     | [monitor] control thread has ended
[2025-06-06 03:46:52] 2025-06-06 03:46:51,270 | INFO     | all workflow threads have been joined
[2025-06-06 03:46:52] 2025-06-06 03:46:51,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:46:52] 2025-06-06 03:46:51,271 | INFO     | traces error code: 0
[2025-06-06 03:46:52] 2025-06-06 03:46:51,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:46:52] 2025-06-06 03:46:51,372 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:46:52] 2025-06-06 03:46:51,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:46:52] 2025-06-06 03:46:51,399 [wrapper] pilotpid: 1391013
[2025-06-06 03:46:52] 2025-06-06 03:46:51,431 [wrapper] Pilot exit status: 0
[2025-06-06 03:46:52] 2025-06-06 03:46:51,607 [wrapper] pandaids: 6678363780
[2025-06-06 03:46:52] 2025-06-06 03:46:51,775 [wrapper] cleanup supervisor_pilot 1445109 1391014
[2025-06-06 03:46:52] 2025-06-06 03:46:51,811 [wrapper] Test setup, not cleaning
[2025-06-06 03:46:52] 2025-06-06 03:46:51,862 [wrapper] apfmon messages muted
[2025-06-06 03:46:52] 2025-06-06 03:46:51,891 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:46:52] 2025-06-06 03:46:51,911 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:46:52]  *** Error codes and diagnostics ***
[2025-06-06 03:46:52]     "exeErrorCode": 0,
[2025-06-06 03:46:52]     "exeErrorDiag": "",
[2025-06-06 03:46:52]     "pilotErrorCode": 0,
[2025-06-06 03:46:52]     "pilotErrorDiag": "",
[2025-06-06 03:46:52]  *** Listing of results directory ***
[2025-06-06 03:46:52] total 399052
[2025-06-06 03:46:52] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 03:46:52] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:46 queuedata.json
[2025-06-06 03:46:52] -rwx------ 1 boinc boinc     37140 Jun  4 05:47 runpilot2-wrapper.sh
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc       100 Jun  6 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:46:52] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 00:51 run_atlas
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc       105 Jun  6 00:51 job.xml
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc      9357 Jun  6 00:51 init_data.xml
[2025-06-06 03:46:52] -rw-r--r-- 2 boinc boinc 218110125 Jun  6 00:51 EVNT.45006593._002147.pool.root.1
[2025-06-06 03:46:52] drwxrwx--x 2 boinc boinc      4096 Jun  6 00:51 shared
[2025-06-06 03:46:52] -rw-r--r-- 2 boinc boinc    508883 Jun  6 00:51 input.tar.gz
[2025-06-06 03:46:52] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:51 start_atlas.sh
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc         0 Jun  6 00:51 boinc_lockfile
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc      2524 Jun  6 00:51 pandaJob.out
[2025-06-06 03:46:52] -rw------- 1 boinc boinc    987721 Jun  6 00:52 agis_schedconf.cvmfs.json
[2025-06-06 03:46:52] -rw------- 1 boinc boinc   1598969 Jun  6 00:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:46:52] drwx------ 4 boinc boinc      4096 Jun  6 00:52 pilot3
[2025-06-06 03:46:52] -rw------- 1 boinc boinc 183831043 Jun  6 03:44 HITS.45006595._053655.pool.root.1
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc       530 Jun  6 03:44 boinc_task_state.xml
[2025-06-06 03:46:52] -rw------- 1 boinc boinc      1021 Jun  6 03:45 memory_monitor_summary.json
[2025-06-06 03:46:52] -rw------- 1 boinc boinc    425758 Jun  6 03:45 log.45006595._053655.job.log.tgz.1
[2025-06-06 03:46:52] -rw------- 1 boinc boinc        95 Jun  6 03:45 pilot_heartbeat.json
[2025-06-06 03:46:52] -rw------- 1 boinc boinc      7677 Jun  6 03:46 heartbeat.json
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 03:46 boinc_mmap_file
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc        28 Jun  6 03:46 wrapper_checkpoint.txt
[2025-06-06 03:46:52] -rw------- 1 boinc boinc      4499 Jun  6 03:46 pilotlog.txt
[2025-06-06 03:46:52] -rw------- 1 boinc boinc    996347 Jun  6 03:46 log.45006595._053655.job.log.1
[2025-06-06 03:46:52] -rw------- 1 boinc boinc       357 Jun  6 03:46 output.list
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc       620 Jun  6 03:46 runtime_log
[2025-06-06 03:46:52] -rw------- 1 boinc boinc   1443840 Jun  6 03:46 result.tar.gz
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc      8949 Jun  6 03:46 runtime_log.err
[2025-06-06 03:46:52] -rw------- 1 boinc boinc       652 Jun  6 03:46 F2kNDmh9vg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVQnKDmiszlXo.diag
[2025-06-06 03:46:52] -rw-rw-r-- 1 boinc boinc     21137 Jun  6 03:46 stderr.txt
[2025-06-06 03:46:52] HITS file was successfully produced:
[2025-06-06 03:46:52] -rw------- 1 boinc boinc 183831043 Jun  6 03:44 shared/HITS.pool.root.1
[2025-06-06 03:46:52]  *** Contents of shared directory: ***
[2025-06-06 03:46:52] total 394460
[2025-06-06 03:46:52] -rw-r--r-- 2 boinc boinc 218110125 Jun  6 00:51 ATLAS.root_0
[2025-06-06 03:46:52] -rw-r--r-- 2 boinc boinc    508883 Jun  6 00:51 input.tar.gz
[2025-06-06 03:46:52] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:51 start_atlas.sh
[2025-06-06 03:46:52] -rw------- 1 boinc boinc 183831043 Jun  6 03:44 HITS.pool.root.1
[2025-06-06 03:46:52] -rw------- 1 boinc boinc   1443840 Jun  6 03:46 result.tar.gz
03:46:54 (1387404): run_atlas exited; CPU time 37062.389753
03:46:54 (1387404): called boinc_finish(0)

</stderr_txt>
]]>

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