Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:46:55 (15841): wrapper (7.7.26015): starting
06:46:55 (15841): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:46:55] Arguments: --nthreads 8
[2025-06-04 06:46:55] Threads: 8
[2025-06-04 06:46:55] Checking for CVMFS
[2025-06-04 06:46:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:46:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:46:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:46:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:46:56] 2.11.2.0 2931 35533 76592 146777 1 58 17849493 20275200 1 130560 0 11401933 99.976 6621269 8087 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:46:56] CVMFS is ok
[2025-06-04 06:46:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:46:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:46:56] Further information can be found at the LHC@home message board.
[2025-06-04 06:46:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:46:56] Checking for apptainer binary...
[2025-06-04 06:46:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:46:56] Running /usr/bin/apptainer --version
[2025-06-04 06:46:56] apptainer version 1.3.2-1.el7
[2025-06-04 06:46:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:46:58] c-115-5.aglt2.org
[2025-06-04 06:46:58] apptainer works
[2025-06-04 06:46:58] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:46:58] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:46:58] Starting ATLAS job with PandaID=6678363822
[2025-06-04 06:46:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:32:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:32:15] 2025-06-04 12:31:55,110 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:32:15] 2025-06-04 12:31:55,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:32:15] 2025-06-04 12:31:55,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:32:15] 2025-06-04 12:31:55,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:32:15] 2025-06-04 12:31:55,113 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:32:15] 2025-06-04 12:31:55,113 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,114 | INFO     | sum of deviations: -2154427218.999999
[2025-06-04 08:32:15] 2025-06-04 12:31:55,114 | INFO     | mean x: 1749037177.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,114 | INFO     | mean y: 2466210.9611650486
[2025-06-04 08:32:15] 2025-06-04 12:31:55,114 | INFO     | -- intersect: 11124435931.397219
[2025-06-04 08:32:15] 2025-06-04 12:31:55,114 | INFO     | intersect: 11124435931.397219
[2025-06-04 08:32:15] 2025-06-04 12:31:55,115 | INFO     | chi2: 2.293259504563115
[2025-06-04 08:32:15] 2025-06-04 12:31:55,115 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 08:32:15] 2025-06-04 12:31:55,115 | INFO     | sum of deviations: 4491242242.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,115 | INFO     | mean x: 1749037024.5
[2025-06-04 08:32:15] 2025-06-04 12:31:55,116 | INFO     | mean y: 2486916.897959184
[2025-06-04 08:32:15] 2025-06-04 12:31:55,116 | INFO     | -- intersect: -26916211348.286106
[2025-06-04 08:32:15] 2025-06-04 12:31:55,116 | INFO     | intersect: -26916211348.286106
[2025-06-04 08:32:15] 2025-06-04 12:31:55,116 | INFO     | chi2: 1.5310726474628311
[2025-06-04 08:32:15] 2025-06-04 12:31:55,116 | INFO     | current chi2=1.5310726474628311 (change=33.235961982657805 %)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,116 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,117 | INFO     | sum of deviations: 4234450541.9999995
[2025-06-04 08:32:15] 2025-06-04 12:31:55,117 | INFO     | mean x: 1749036872.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,117 | INFO     | mean y: 2485994.1075268816
[2025-06-04 08:32:15] 2025-06-04 12:31:55,117 | INFO     | -- intersect: -29694951458.485622
[2025-06-04 08:32:15] 2025-06-04 12:31:55,117 | INFO     | intersect: -29694951458.485622
[2025-06-04 08:32:15] 2025-06-04 12:31:55,118 | INFO     | chi2: 1.5337942286942667
[2025-06-04 08:32:15] 2025-06-04 12:31:55,118 | INFO     | current chi2=1.5337942286942667 (change=-0.1777565052805041 %)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,118 | INFO     | right removable region: 92
[2025-06-04 08:32:15] 2025-06-04 12:31:55,118 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 08:32:15] 2025-06-04 12:31:55,118 | INFO     | sum of deviations: -16361450713.5
[2025-06-04 08:32:15] 2025-06-04 12:31:55,119 | INFO     | mean x: 1749037329.5
[2025-06-04 08:32:15] 2025-06-04 12:31:55,119 | INFO     | mean y: 2511206.0918367347
[2025-06-04 08:32:15] 2025-06-04 12:31:55,119 | INFO     | -- intersect: 98066478368.99341
[2025-06-04 08:32:15] 2025-06-04 12:31:55,119 | INFO     | intersect: 98066478368.99341
[2025-06-04 08:32:15] 2025-06-04 12:31:55,119 | INFO     | chi2: 0.9069499442191474
[2025-06-04 08:32:15] 2025-06-04 12:31:55,119 | INFO     | current chi2=0.9069499442191474 (change=60.451490883848805 %)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,119 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,120 | INFO     | sum of deviations: -13151299697.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,120 | INFO     | mean x: 1749037482.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,120 | INFO     | mean y: 2499614.8172043012
[2025-06-04 08:32:15] 2025-06-04 12:31:55,120 | INFO     | -- intersect: 92236434693.55476
[2025-06-04 08:32:15] 2025-06-04 12:31:55,120 | INFO     | intersect: 92236434693.55476
[2025-06-04 08:32:15] 2025-06-04 12:31:55,121 | INFO     | chi2: 0.8995431449228986
[2025-06-04 08:32:15] 2025-06-04 12:31:55,121 | INFO     | current chi2=0.8995431449228986 (change=0.8166712334522361 %)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,121 | INFO     | left removable region: 20
[2025-06-04 08:32:15] 2025-06-04 12:31:55,121 | INFO     | sum of square deviations: 115715658.0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,121 | INFO     | sum of deviations: -99952312.49999994
[2025-06-04 08:32:15] 2025-06-04 12:31:55,121 | INFO     | mean x: 1749037451.5
[2025-06-04 08:32:15] 2025-06-04 12:31:55,122 | INFO     | mean y: 2491496.986111111
[2025-06-04 08:32:15] 2025-06-04 12:31:55,122 | INFO     | -- intersect: 1513266624.1217272
[2025-06-04 08:32:15] 2025-06-04 12:31:55,122 | INFO     | intersect: 1513266624.1217272
[2025-06-04 08:32:15] 2025-06-04 12:31:55,122 | INFO     | chi2: 0.01408790930888222
[2025-06-04 08:32:15] 2025-06-04 12:31:55,122 | INFO     | -- intersect: 1513266624.1217272
[2025-06-04 08:32:15] 2025-06-04 12:31:55,122 | INFO     | current memory leak: -0.86 B/s (using 72 data points, chi2=0.01)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | ..............................
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | . Timing measurements:
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | . get job = 0 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | . initial setup = 2 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | . payload setup = 11 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | . stage-in = 0 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | . payload execution = 6242 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,123 | INFO     | . stage-out = 0 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,124 | INFO     | . log creation = 0 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,124 | INFO     | ..............................
[2025-06-04 08:32:15] 2025-06-04 12:31:55,212 | INFO     | 
[2025-06-04 08:32:15] 2025-06-04 12:31:55,212 | INFO     | job summary report
[2025-06-04 08:32:15] 2025-06-04 12:31:55,212 | INFO     | --------------------------------------------------
[2025-06-04 08:32:15] 2025-06-04 12:31:55,212 | INFO     | PanDA job id: 6678363822
[2025-06-04 08:32:15] 2025-06-04 12:31:55,212 | INFO     | task id: 45006595
[2025-06-04 08:32:15] 2025-06-04 12:31:55,212 | INFO     | errors: (none)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | pilot state: finished 
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | transexitcode: 0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | exeerrorcode: 0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | exeerrordiag: 
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | exitcode: 0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | exitmsg: OK
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | cpuconsumptiontime: 45979 s
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | nevents: 400
[2025-06-04 08:32:15] 2025-06-04 12:31:55,213 | INFO     | neventsw: 0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | pid: 27464
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | pgrp: 27464
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | corecount: 8
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | event service: False
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | sizes: {0: 2404957, 1: 2405212, 7: 2405418, 12: 2405446, 6257: 2432230, 6258: 2441171, 6259: 2441355, 6265: 2441525}
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | --------------------------------------------------
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | 
[2025-06-04 08:32:15] 2025-06-04 12:31:55,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:32:15] 2025-06-04 12:31:55,242 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,244 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,244 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,245 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,245 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,245 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,245 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,245 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:32:15] 2025-06-04 12:31:55,246 | INFO     | job 6678363822 has completed (purged errors)
[2025-06-04 08:32:15] 2025-06-04 12:31:55,246 | INFO     | overall cleanup function is called
[2025-06-04 08:32:15] 2025-06-04 12:31:56,254 | INFO     | --- collectZombieJob: --- 10, [27464]
[2025-06-04 08:32:15] 2025-06-04 12:31:56,254 | INFO     | zombie collector waiting for pid 27464
[2025-06-04 08:32:15] 2025-06-04 12:31:56,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:32:15] 2025-06-04 12:31:56,255 | INFO     | collected zombie processes
[2025-06-04 08:32:15] 2025-06-04 12:31:56,255 | INFO     | will attempt to kill all subprocesses of pid=27464
[2025-06-04 08:32:15] 2025-06-04 12:31:56,335 | INFO     | process IDs to be killed: [27464] (in reverse order)
[2025-06-04 08:32:15] 2025-06-04 12:31:56,394 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:32:15] 2025-06-04 12:31:56,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:32:15] 2025-06-04 12:31:56,398 | INFO     | did not find any defunct processes belonging to 27464
[2025-06-04 08:32:15] 2025-06-04 12:31:56,400 | INFO     | did not find any defunct processes belonging to 27464
[2025-06-04 08:32:15] 2025-06-04 12:31:56,400 | INFO     | ready for new job
[2025-06-04 08:32:15] 2025-06-04 12:31:56,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:32:15] 2025-06-04 12:31:56,402 | INFO     | **************************************
[2025-06-04 08:32:15] 2025-06-04 12:31:56,402 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:32:15] 2025-06-04 12:31:56,402 | INFO     | **************************************
[2025-06-04 08:32:15] 2025-06-04 12:31:56,403 | INFO     | 
[2025-06-04 08:32:15] 2025-06-04 12:31:56,403 | INFO     | architecture information:
[2025-06-04 08:32:15] 2025-06-04 12:31:56,404 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:32:15] 2025-06-04 12:31:56,423 | INFO     | cat /etc/os-release:
[2025-06-04 08:32:15] NAME="CentOS Linux"
[2025-06-04 08:32:15] VERSION="7 (Core)"
[2025-06-04 08:32:15] ID="centos"
[2025-06-04 08:32:15] ID_LIKE="rhel fedora"
[2025-06-04 08:32:15] VERSION_ID="7"
[2025-06-04 08:32:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:32:15] ANSI_COLOR="0;31"
[2025-06-04 08:32:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:32:15] HOME_URL="https://www.centos.org/"
[2025-06-04 08:32:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:32:15] 
[2025-06-04 08:32:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:32:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:32:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:32:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:32:15] 
[2025-06-04 08:32:15] 2025-06-04 12:31:56,423 | INFO     | **************************************
[2025-06-04 08:32:15] 2025-06-04 12:31:56,926 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:32:15] 2025-06-04 12:31:56,947 | INFO     | sufficient remaining disk space (18641584128 B)
[2025-06-04 08:32:15] 2025-06-04 12:31:56,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:32:15] 2025-06-04 12:31:56,948 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:32:15] 2025-06-04 12:31:56,948 | INFO     | update_server=False
[2025-06-04 08:32:15] 2025-06-04 12:31:56,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:32:15] 2025-06-04 12:31:56,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:32:15] 2025-06-04 12:31:56,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:32:15] 2025-06-04 12:31:56,949 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:32:15] 2025-06-04 12:31:56,951 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:32:15] 2025-06-04 12:31:56,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:32:15] 2025-06-04 12:31:56,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:32:15] 2025-06-04 12:31:57,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:32:15] 2025-06-04 12:31:57,202 | INFO     | aborting loop
[2025-06-04 08:32:15] 2025-06-04 12:31:57,308 | INFO     | all data control threads have been joined
[2025-06-04 08:32:15] 2025-06-04 12:31:57,831 | INFO     | all payload control threads have been joined
[2025-06-04 08:32:15] 2025-06-04 12:31:57,898 | INFO     | all job control threads have been joined
[2025-06-04 08:32:15] 2025-06-04 12:31:57,954 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:57,954 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,171 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,236 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,314 | INFO     | [data] control thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,571 | INFO     | [job] validate thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,595 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,836 | INFO     | [payload] control thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,839 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,842 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,903 | INFO     | [job] control thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:58,951 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:59,074 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:59,369 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:31:59,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:32:15] 2025-06-04 12:32:03,642 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:32:07,471 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:32:15] 2025-06-04 12:32:08,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:32:15] 2025-06-04 12:32:10,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869282297664)>', '<ExcThread(monitor, started 139868462102272)>']
[2025-06-04 08:32:15] 2025-06-04 12:32:10,661 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-06-04 08:32:15] 2025-06-04 12:32:11,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:32:15] 2025-06-04 12:32:11,012 | INFO     | [monitor] control thread has ended
[2025-06-04 08:32:15] 2025-06-04 12:32:15,115 | INFO     | all workflow threads have been joined
[2025-06-04 08:32:15] 2025-06-04 12:32:15,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:32:15] 2025-06-04 12:32:15,117 | INFO     | traces error code: 0
[2025-06-04 08:32:15] 2025-06-04 12:32:15,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:32:15] 2025-06-04 12:32:15,245 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:32:15] 2025-06-04 12:32:15,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:32:15] 2025-06-04 12:32:15,255 [wrapper] pilotpid: 19522
[2025-06-04 08:32:15] 2025-06-04 12:32:15,260 [wrapper] Pilot exit status: 0
[2025-06-04 08:32:15] 2025-06-04 12:32:15,278 [wrapper] pandaids: 6678363822
[2025-06-04 08:32:15] 2025-06-04 12:32:15,324 [wrapper] cleanup supervisor_pilot 29355 19523
[2025-06-04 08:32:15] 2025-06-04 12:32:15,330 [wrapper] Test setup, not cleaning
[2025-06-04 08:32:15] 2025-06-04 12:32:15,334 [wrapper] apfmon messages muted
[2025-06-04 08:32:15] 2025-06-04 12:32:15,339 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:32:15] 2025-06-04 12:32:15,344 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:32:15]  *** Error codes and diagnostics ***
[2025-06-04 08:32:15]     "exeErrorCode": 0,
[2025-06-04 08:32:15]     "exeErrorDiag": "",
[2025-06-04 08:32:15]     "pilotErrorCode": 0,
[2025-06-04 08:32:15]     "pilotErrorDiag": "",
[2025-06-04 08:32:15]  *** Listing of results directory ***
[2025-06-04 08:32:15] total 388836
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 08:32:15] -rwx------ 1 boincer umatlas     37140 Jun  4 01:55 runpilot2-wrapper.sh
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:55 queuedata.json
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:32:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:46 run_atlas
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:46 job.xml
[2025-06-04 08:32:15] -rw-r--r-- 2 boincer umatlas 214829038 Jun  4 06:46 EVNT.45006593._002149.pool.root.1
[2025-06-04 08:32:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:46 start_atlas.sh
[2025-06-04 08:32:15] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:46 shared
[2025-06-04 08:32:15] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 06:46 input.tar.gz
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:46 boinc_lockfile
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:46 pandaJob.out
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas    986812 Jun  4 06:47 agis_schedconf.cvmfs.json
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas   1603667 Jun  4 06:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:32:15] drwx------ 4 boincer umatlas      4096 Jun  4 06:47 pilot3
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 08:27 init_data.xml
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas 177699853 Jun  4 08:31 HITS.45006595._053697.pool.root.1
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:31 boinc_task_state.xml
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas        95 Jun  4 08:31 pilot_heartbeat.json
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas      1049 Jun  4 08:31 memory_monitor_summary.json
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas    322372 Jun  4 08:31 log.45006595._053697.job.log.tgz.1
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas      7753 Jun  4 08:31 heartbeat.json
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:31 boinc_mmap_file
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:31 wrapper_checkpoint.txt
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas      4548 Jun  4 08:32 pilotlog.txt
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas    582512 Jun  4 08:32 log.45006595._053697.job.log.1
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas       357 Jun  4 08:32 output.list
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:32 runtime_log
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas    921600 Jun  4 08:32 result.tar.gz
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas       657 Jun  4 08:32 wIvKDmiGwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYoaKDme8F5em.diag
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 08:32 runtime_log.err
[2025-06-04 08:32:15] -rw-r--r-- 1 boincer umatlas     20759 Jun  4 08:32 stderr.txt
[2025-06-04 08:32:15] HITS file was successfully produced:
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas 177699853 Jun  4 08:31 shared/HITS.pool.root.1
[2025-06-04 08:32:15]  *** Contents of shared directory: ***
[2025-06-04 08:32:15] total 384752
[2025-06-04 08:32:15] -rw-r--r-- 2 boincer umatlas 214829038 Jun  4 06:46 ATLAS.root_0
[2025-06-04 08:32:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:46 start_atlas.sh
[2025-06-04 08:32:15] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 06:46 input.tar.gz
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas 177699853 Jun  4 08:31 HITS.pool.root.1
[2025-06-04 08:32:15] -rw------- 1 boincer umatlas    921600 Jun  4 08:32 result.tar.gz
08:32:17 (15841): run_atlas exited; CPU time 45933.367193
08:32:17 (15841): called boinc_finish(0)

</stderr_txt>
]]>

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