Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:26:37 (830934): wrapper (7.7.26015): starting
03:26:37 (830934): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:26:37] Arguments: --nthreads 4
[2025-06-06 03:26:37] Threads: 4
[2025-06-06 03:26:37] Checking for CVMFS
[2025-06-06 03:26:37] No cvmfs_config command found, will try listing directly
[2025-06-06 03:26:37] CVMFS is ok
[2025-06-06 03:26:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:26:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:26:37] Further information can be found at the LHC@home message board.
[2025-06-06 03:26:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:26:37] Checking for apptainer binary...
[2025-06-06 03:26:37] which: no apptainer in ((null))
[2025-06-06 03:26:37] apptainer is not installed, using version from CVMFS
[2025-06-06 03:26:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:26:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-06 03:26:37] apptainer works
[2025-06-06 03:26:37] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:26:37] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:26:37] Starting ATLAS job with PandaID=6677921469
[2025-06-06 03:26:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 06:04:38]  *** The last 200 lines of the pilot log: ***
[2025-06-06 06:04:38] 2025-06-06 04:01:38,190 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1186360/.job.ad'
[2025-06-06 06:04:38] 2025-06-06 04:01:38,191 | INFO     | total number of processed events: 400 (read)
[2025-06-06 06:04:38] 2025-06-06 04:01:38,194 | INFO     | executing command: lscpu
[2025-06-06 06:04:38] 2025-06-06 04:01:38,252 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 06:04:38] 2025-06-06 04:01:40,576 | INFO     | monitor loop #680: job 0:6677921469 is in state 'finished'
[2025-06-06 06:04:38] 2025-06-06 04:01:40,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,366 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 06:04:38] 2025-06-06 04:01:42,367 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6677921469/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,368 | INFO     | extracted standard info from prmon json
[2025-06-06 06:04:38] 2025-06-06 04:01:42,368 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 06:04:38] 2025-06-06 04:01:42,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 06:04:38] 2025-06-06 04:01:42,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 06:04:38] 2025-06-06 04:01:42,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 06:04:38] 2025-06-06 04:01:42,372 | INFO     | fitting pss+swap vs Time
[2025-06-06 06:04:38] 2025-06-06 04:01:42,372 | INFO     | sum of square deviations: 1088905998.0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,373 | INFO     | sum of deviations: 11088012608.5
[2025-06-06 06:04:38] 2025-06-06 04:01:42,373 | INFO     | mean x: 1749177840.5
[2025-06-06 06:04:38] 2025-06-06 04:01:42,373 | INFO     | mean y: 2324815.6513157897
[2025-06-06 06:04:38] 2025-06-06 04:01:42,373 | INFO     | -- intersect: -17809043645.534073
[2025-06-06 06:04:38] 2025-06-06 04:01:42,373 | INFO     | intersect: -17809043645.534073
[2025-06-06 06:04:38] 2025-06-06 04:01:42,373 | INFO     | chi2: 1.7754818054175188
[2025-06-06 06:04:38] 2025-06-06 04:01:42,374 | INFO     | sum of square deviations: 984941258.0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,374 | INFO     | sum of deviations: 10873928807.999998
[2025-06-06 06:04:38] 2025-06-06 04:01:42,375 | INFO     | mean x: 1749177688.0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,375 | INFO     | mean y: 2324501.5578231295
[2025-06-06 06:04:38] 2025-06-06 04:01:42,375 | INFO     | -- intersect: -19308912079.673943
[2025-06-06 06:04:38] 2025-06-06 04:01:42,375 | INFO     | intersect: -19308912079.673943
[2025-06-06 06:04:38] 2025-06-06 04:01:42,375 | INFO     | chi2: 1.7776847096794632
[2025-06-06 06:04:38] 2025-06-06 04:01:42,375 | INFO     | current chi2=1.7776847096794632 (change=-0.12407360386475158 %)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,375 | INFO     | right removable region: 146
[2025-06-06 06:04:38] 2025-06-06 04:01:42,376 | INFO     | sum of square deviations: 984941258.0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,376 | INFO     | sum of deviations: -14371928302.000002
[2025-06-06 06:04:38] 2025-06-06 04:01:42,376 | INFO     | mean x: 1749177993.0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,377 | INFO     | mean y: 2361713.1428571427
[2025-06-06 06:04:38] 2025-06-06 04:01:42,377 | INFO     | -- intersect: 25525772879.6921
[2025-06-06 06:04:38] 2025-06-06 04:01:42,377 | INFO     | intersect: 25525772879.6921
[2025-06-06 06:04:38] 2025-06-06 04:01:42,377 | INFO     | chi2: 0.04231603380026155
[2025-06-06 06:04:38] 2025-06-06 04:01:42,377 | INFO     | current chi2=0.04231603380026155 (change=97.61664503285007 %)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,377 | INFO     | sum of square deviations: 887813855.5
[2025-06-06 06:04:38] 2025-06-06 04:01:42,378 | INFO     | sum of deviations: -13735947456.499998
[2025-06-06 06:04:38] 2025-06-06 04:01:42,378 | INFO     | mean x: 1749178145.5
[2025-06-06 06:04:38] 2025-06-06 04:01:42,378 | INFO     | mean y: 2360683.6830985914
[2025-06-06 06:04:38] 2025-06-06 04:01:42,378 | INFO     | -- intersect: 27065037110.50544
[2025-06-06 06:04:38] 2025-06-06 04:01:42,379 | INFO     | intersect: 27065037110.50544
[2025-06-06 06:04:38] 2025-06-06 04:01:42,379 | INFO     | chi2: 0.03829614671152763
[2025-06-06 06:04:38] 2025-06-06 04:01:42,379 | INFO     | current chi2=0.03829614671152763 (change=9.499678319826538 %)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,379 | INFO     | left removable region: 20
[2025-06-06 06:04:38] 2025-06-06 04:01:42,379 | INFO     | sum of square deviations: 620244187.5
[2025-06-06 06:04:38] 2025-06-06 04:01:42,380 | INFO     | sum of deviations: -9498309542.499998
[2025-06-06 06:04:38] 2025-06-06 04:01:42,380 | INFO     | mean x: 1749178267.5
[2025-06-06 06:04:38] 2025-06-06 04:01:42,380 | INFO     | mean y: 2355057.4365079366
[2025-06-06 06:04:38] 2025-06-06 04:01:42,380 | INFO     | -- intersect: 26788960985.49104
[2025-06-06 06:04:38] 2025-06-06 04:01:42,380 | INFO     | intersect: 26788960985.49104
[2025-06-06 06:04:38] 2025-06-06 04:01:42,380 | INFO     | chi2: 0.0352033264165818
[2025-06-06 06:04:38] 2025-06-06 04:01:42,381 | INFO     | -- intersect: 26788960985.49104
[2025-06-06 06:04:38] 2025-06-06 04:01:42,381 | INFO     | current memory leak: -15.31 B/s (using 126 data points, chi2=0.04)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,381 | INFO     | ..............................
[2025-06-06 06:04:38] 2025-06-06 04:01:42,381 | INFO     | . Timing measurements:
[2025-06-06 06:04:38] 2025-06-06 04:01:42,381 | INFO     | . get job = 0 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,381 | INFO     | . initial setup = 1 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,382 | INFO     | . payload setup = 7 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,382 | INFO     | . stage-in = 0 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,382 | INFO     | . payload execution = 9257 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,382 | INFO     | . stage-out = 0 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,382 | INFO     | . log creation = 0 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,382 | INFO     | ..............................
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | 
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | job summary report
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | --------------------------------------------------
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | PanDA job id: 6677921469
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | task id: 45006595
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | errors: (none)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 06:04:38] 2025-06-06 04:01:42,477 | INFO     | pilot state: finished 
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | transexitcode: 0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | exeerrorcode: 0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | exeerrordiag: 
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | exitcode: 0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | exitmsg: OK
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | cpuconsumptiontime: 35457 s
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | nevents: 400
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | neventsw: 0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | pid: 841990
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | pgrp: 841990
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | corecount: 4
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | event service: False
[2025-06-06 06:04:38] 2025-06-06 04:01:42,478 | INFO     | sizes: {0: 2397353, 5: 2397559, 11: 2397615, 9268: 2425708, 9269: 2434726, 9272: 2434726, 9280: 2435024}
[2025-06-06 06:04:38] 2025-06-06 04:01:42,479 | INFO     | --------------------------------------------------
[2025-06-06 06:04:38] 2025-06-06 04:01:42,479 | INFO     | 
[2025-06-06 06:04:38] 2025-06-06 04:01:42,479 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-06 06:04:38] 2025-06-06 04:01:42,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,498 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 06:04:38] 2025-06-06 04:01:42,499 | INFO     | job 6677921469 has completed (purged errors)
[2025-06-06 06:04:38] 2025-06-06 04:01:42,499 | INFO     | overall cleanup function is called
[2025-06-06 06:04:38] 2025-06-06 04:01:43,507 | INFO     | --- collectZombieJob: --- 10, [841990]
[2025-06-06 06:04:38] 2025-06-06 04:01:43,508 | INFO     | zombie collector waiting for pid 841990
[2025-06-06 06:04:38] 2025-06-06 04:01:43,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 06:04:38] 2025-06-06 04:01:43,508 | INFO     | collected zombie processes
[2025-06-06 06:04:38] 2025-06-06 04:01:43,508 | INFO     | will attempt to kill all subprocesses of pid=841990
[2025-06-06 06:04:38] 2025-06-06 04:01:43,824 | INFO     | process IDs to be killed: [841990] (in reverse order)
[2025-06-06 06:04:38] 2025-06-06 04:01:43,930 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 06:04:38] 2025-06-06 04:01:43,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 06:04:38] 2025-06-06 04:01:43,942 | INFO     | did not find any defunct processes belonging to 841990
[2025-06-06 06:04:38] 2025-06-06 04:01:43,952 | INFO     | did not find any defunct processes belonging to 841990
[2025-06-06 06:04:38] 2025-06-06 04:01:43,952 | INFO     | ready for new job
[2025-06-06 06:04:38] 2025-06-06 04:01:43,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 06:04:38] 2025-06-06 04:01:43,954 | INFO     | **************************************
[2025-06-06 06:04:38] 2025-06-06 04:01:43,954 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 06:04:38] 2025-06-06 04:01:43,955 | INFO     | **************************************
[2025-06-06 06:04:38] 2025-06-06 04:01:43,955 | INFO     | 
[2025-06-06 06:04:38] 2025-06-06 04:01:43,958 | INFO     | architecture information:
[2025-06-06 06:04:38] 2025-06-06 04:01:43,959 | INFO     | executing command: cat /etc/os-release
[2025-06-06 06:04:38] 2025-06-06 04:01:43,973 | INFO     | cat /etc/os-release:
[2025-06-06 06:04:38] NAME="CentOS Linux"
[2025-06-06 06:04:38] VERSION="7 (Core)"
[2025-06-06 06:04:38] ID="centos"
[2025-06-06 06:04:38] ID_LIKE="rhel fedora"
[2025-06-06 06:04:38] VERSION_ID="7"
[2025-06-06 06:04:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 06:04:38] ANSI_COLOR="0;31"
[2025-06-06 06:04:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 06:04:38] HOME_URL="https://www.centos.org/"
[2025-06-06 06:04:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 06:04:38] 
[2025-06-06 06:04:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 06:04:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 06:04:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 06:04:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 06:04:38] 
[2025-06-06 06:04:38] 2025-06-06 04:01:43,974 | INFO     | **************************************
[2025-06-06 06:04:38] 2025-06-06 04:01:44,477 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-06 06:04:38] 2025-06-06 04:01:44,494 | INFO     | sufficient remaining disk space (651683692544 B)
[2025-06-06 06:04:38] 2025-06-06 04:01:44,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 06:04:38] 2025-06-06 04:01:44,494 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 06:04:38] 2025-06-06 04:01:44,494 | INFO     | update_server=False
[2025-06-06 06:04:38] 2025-06-06 04:01:44,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 06:04:38] 2025-06-06 04:01:44,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:04:38] 2025-06-06 04:01:44,495 | INFO     | aborting loop
[2025-06-06 06:04:38] 2025-06-06 04:01:44,498 | INFO     | all data control threads have been joined
[2025-06-06 06:04:38] 2025-06-06 04:01:44,835 | INFO     | all job control threads have been joined
[2025-06-06 06:04:38] 2025-06-06 04:01:45,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 06:04:38] 2025-06-06 04:01:45,338 | INFO     | PID=834617 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 06:04:38] 2025-06-06 04:01:45,338 | INFO     | .. there are 6 such processes running
[2025-06-06 06:04:38] 2025-06-06 04:01:45,338 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 06:04:38] 2025-06-06 04:01:45,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 06:04:38] 2025-06-06 04:01:45,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 06:04:38] 2025-06-06 04:01:45,500 | INFO     | [job] retrieve thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:45,500 | INFO     | [job] job monitor thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:45,503 | INFO     | [data] control thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:45,553 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:45,663 | INFO     | [data] copytool_in thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:45,793 | INFO     | all payload control threads have been joined
[2025-06-06 06:04:38] 2025-06-06 04:01:45,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 06:04:38] 2025-06-06 04:01:45,841 | INFO     | [job] control thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:46,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:46,310 | INFO     | [payload] failed_post thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:46,423 | INFO     | [job] validate thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:46,715 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:46,799 | INFO     | [payload] control thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:46,863 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:46,875 | INFO     | [payload] validate_post thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:47,332 | INFO     | [data] copytool_out thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:47,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:04:38] 2025-06-06 04:01:48,494 | INFO     | [job] queue monitor thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:49,845 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 06:04:38] 2025-06-06 04:01:50,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22847870568256)>', '<ExcThread(monitor, started 22847630042880)>']
[2025-06-06 06:04:38] 2025-06-06 04:01:50,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 06:04:38] 2025-06-06 04:01:50,363 | INFO     | [monitor] control thread has ended
[2025-06-06 06:04:38] 2025-06-06 04:01:55,141 | INFO     | all workflow threads have been joined
[2025-06-06 06:04:38] 2025-06-06 04:01:55,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 06:04:38] 2025-06-06 04:01:55,141 | INFO     | traces error code: 0
[2025-06-06 06:04:38] 2025-06-06 04:01:55,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 06:04:38] 2025-06-06 04:01:55,321 [wrapper] ==== pilot stdout END ====
[2025-06-06 06:04:38] 2025-06-06 04:01:55,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 06:04:38] 2025-06-06 04:01:55,326 [wrapper] pilotpid: 834617
[2025-06-06 06:04:38] 2025-06-06 04:01:55,329 [wrapper] Pilot exit status: 0
[2025-06-06 06:04:38] 2025-06-06 04:01:55,338 [wrapper] pandaids: 6677921469
[2025-06-06 06:04:38] 2025-06-06 04:01:55,407 [wrapper] cleanup supervisor_pilot 1062625 834618
[2025-06-06 06:04:38] 2025-06-06 04:01:55,410 [wrapper] Test setup, not cleaning
[2025-06-06 06:04:38] 2025-06-06 04:01:55,413 [wrapper] apfmon messages muted
[2025-06-06 06:04:38] 2025-06-06 04:01:55,416 [wrapper] ==== wrapper stdout END ====
[2025-06-06 06:04:38] 2025-06-06 04:01:55,418 [wrapper] ==== wrapper stderr END ====
[2025-06-06 06:04:38]  *** Error codes and diagnostics ***
[2025-06-06 06:04:38]     "exeErrorCode": 0,
[2025-06-06 06:04:38]     "exeErrorDiag": "",
[2025-06-06 06:04:38]     "pilotErrorCode": 0,
[2025-06-06 06:04:38]     "pilotErrorDiag": "",
[2025-06-06 06:04:38]  *** Listing of results directory ***
[2025-06-06 06:04:38] total 389668
[2025-06-06 06:04:38] -rwx------ 1 boinc boinc     37140 Jun  3 20:41 runpilot2-wrapper.sh
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:41 pilot3.tar.gz
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:41 queuedata.json
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 06:04:38] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:26 run_atlas
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:26 job.xml
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc      6635 Jun  6 03:26 init_data.xml
[2025-06-06 06:04:38] -rw-r--r-- 2 boinc boinc 215606452 Jun  6 03:26 EVNT.45006593._001712.pool.root.1
[2025-06-06 06:04:38] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:26 start_atlas.sh
[2025-06-06 06:04:38] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:26 shared
[2025-06-06 06:04:38] -rw-r--r-- 2 boinc boinc    508873 Jun  6 03:26 input.tar.gz
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:26 boinc_lockfile
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc      2525 Jun  6 03:26 pandaJob.out
[2025-06-06 06:04:38] -rw------- 1 boinc boinc    987721 Jun  6 03:26 agis_schedconf.cvmfs.json
[2025-06-06 06:04:38] -rw------- 1 boinc boinc   1598969 Jun  6 03:26 agis_ddmendpoints.agis.ALL.json
[2025-06-06 06:04:38] drwx------ 4 boinc boinc      4096 Jun  6 03:26 pilot3
[2025-06-06 06:04:38] -rw------- 1 boinc boinc 177234333 Jun  6 06:00 HITS.45006595._042680.pool.root.1
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc       528 Jun  6 06:00 boinc_task_state.xml
[2025-06-06 06:04:38] -rw------- 1 boinc boinc        95 Jun  6 06:01 pilot_heartbeat.json
[2025-06-06 06:04:38] -rw------- 1 boinc boinc      1031 Jun  6 06:01 memory_monitor_summary.json
[2025-06-06 06:04:38] -rw------- 1 boinc boinc    287614 Jun  6 06:01 log.45006595._042680.job.log.tgz.1
[2025-06-06 06:04:38] -rw------- 1 boinc boinc      7725 Jun  6 06:01 heartbeat.json
[2025-06-06 06:04:38] -rw------- 1 boinc boinc      4757 Jun  6 06:01 pilotlog.txt
[2025-06-06 06:04:38] -rw------- 1 boinc boinc    880882 Jun  6 06:01 log.45006595._042680.job.log.1
[2025-06-06 06:04:38] -rw------- 1 boinc boinc       357 Jun  6 06:01 output.list
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc       620 Jun  6 06:01 runtime_log
[2025-06-06 06:04:38] -rw------- 1 boinc boinc   1187840 Jun  6 06:01 result.tar.gz
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc      9025 Jun  6 06:01 runtime_log.err
[2025-06-06 06:04:38] -rw------- 1 boinc boinc       662 Jun  6 06:01 MXVKDmFllg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXbZKDmN41axm.diag
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc        26 Jun  6 06:04 wrapper_checkpoint.txt
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc      8192 Jun  6 06:04 boinc_mmap_file
[2025-06-06 06:04:38] -rw-r--r-- 1 boinc boinc     21008 Jun  6 06:04 stderr.txt
[2025-06-06 06:04:38] HITS file was successfully produced:
[2025-06-06 06:04:38] -rw------- 1 boinc boinc 177234333 Jun  6 06:00 shared/HITS.pool.root.1
[2025-06-06 06:04:38]  *** Contents of shared directory: ***
[2025-06-06 06:04:38] total 385324
[2025-06-06 06:04:38] -rw-r--r-- 2 boinc boinc 215606452 Jun  6 03:26 ATLAS.root_0
[2025-06-06 06:04:38] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:26 start_atlas.sh
[2025-06-06 06:04:38] -rw-r--r-- 2 boinc boinc    508873 Jun  6 03:26 input.tar.gz
[2025-06-06 06:04:38] -rw------- 1 boinc boinc 177234333 Jun  6 06:00 HITS.pool.root.1
[2025-06-06 06:04:38] -rw------- 1 boinc boinc   1187840 Jun  6 06:01 result.tar.gz
06:04:40 (830934): run_atlas exited; CPU time 35814.225484
06:04:40 (830934): called boinc_finish(0)

</stderr_txt>
]]>

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