Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:07 (1783421): wrapper (7.7.26015): starting
06:42:07 (1783421): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:42:07] Arguments: --nthreads 8
[2025-06-04 06:42:07] Threads: 8
[2025-06-04 06:42:07] Checking for CVMFS
[2025-06-04 06:42:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:42:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:42:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:42:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:42:08] 2.12.6.0 5697 1233 233208 146777 0 542 25088204 32935937 28229 16776704 0 17540565 99.693 9877218 20446 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:42:08] CVMFS is ok
[2025-06-04 06:42:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:42:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:42:08] Further information can be found at the LHC@home message board.
[2025-06-04 06:42:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:42:08] Checking for apptainer binary...
[2025-06-04 06:42:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:42:08] Running /usr/bin/apptainer --version
[2025-06-04 06:42:08] apptainer version 1.4.1-1.el9
[2025-06-04 06:42:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:42:08] c7-3-17.aglt2.org
[2025-06-04 06:42:08] apptainer works
[2025-06-04 06:42:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:42:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:42:08] Starting ATLAS job with PandaID=6678286592
[2025-06-04 06:42:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:01:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:01:32]  mtime=0
[2025-06-04 08:01:32]  protocol_id=None
[2025-06-04 08:01:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:01:32]  replicas=None
[2025-06-04 08:01:32]  scope=mc23_13p6TeV
[2025-06-04 08:01:32]  status=None
[2025-06-04 08:01:32]  status_code=0
[2025-06-04 08:01:32]  storage_token=
[2025-06-04 08:01:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678286592/log.45006595._051505.job.log.tgz.1
[2025-06-04 08:01:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/d7/log.45006595._051505.job.log.tgz.1
[2025-06-04 08:01:32]  workdir=None
[2025-06-04 08:01:32] ]
[2025-06-04 08:01:32] 2025-06-04 12:01:02,187 | INFO     | transferring file log.45006595._051505.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678286592/log.45006595._051505.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:01:32] 2025-06-04 12:01:02,187 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678286592/log.45006595._051505.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051505.job
[2025-06-04 08:01:32] 2025-06-04 12:01:02,211 | INFO     | adding to output.list: log.45006595._051505.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/d7/log.45006595._051505.job.log.tg
[2025-06-04 08:01:32] 2025-06-04 12:01:02,212 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:01:32] 2025-06-04 12:01:02,212 | INFO     | summary of transferred files:
[2025-06-04 08:01:32] 2025-06-04 12:01:02,212 | INFO     |  -- lfn=log.45006595._051505.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:01:32] 2025-06-04 12:01:02,212 | INFO     | stage-out finished correctly
[2025-06-04 08:01:32] 2025-06-04 12:01:02,271 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:01:32] 2025-06-04 12:01:02,320 | INFO     | job 6678286592 has state=finished
[2025-06-04 08:01:32] 2025-06-04 12:01:02,320 | INFO     | preparing for final server update for job 6678286592 in state='finished'
[2025-06-04 08:01:32] 2025-06-04 12:01:02,321 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:01:32] 2025-06-04 12:01:02,321 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:01:32] 2025-06-04 12:01:02,321 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:01:32] 2025-06-04 12:01:02,321 | INFO     | job 6678286592 has finished - writing final server update
[2025-06-04 08:01:32] 2025-06-04 12:01:02,321 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:01:32] 2025-06-04 12:01:02,339 | INFO     | executing command: lscpu
[2025-06-04 08:01:32] 2025-06-04 12:01:02,413 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:01:32] 2025-06-04 12:01:06,019 | WARNING  | process 1794727 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:01:32] 2025-06-04 12:01:06,019 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286592/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:01:32] 2025-06-04 12:01:06,531 | INFO     | number of running child processes to parent process 1794727: 1
[2025-06-04 08:01:32] 2025-06-04 12:01:06,531 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:01:32] 2025-06-04 12:01:09,043 | INFO     | monitor loop #325: job 0:6678286592 is in state 'finished'
[2025-06-04 08:01:32] 2025-06-04 12:01:09,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:32] 2025-06-04 12:01:09,756 | INFO     | PID=1787204 has CPU usage=15.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 08:01:32] 2025-06-04 12:01:09,756 | INFO     | .. there are 43 such processes running
[2025-06-04 08:01:32] 2025-06-04 12:01:11,370 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:01:32] 2025-06-04 12:01:11,372 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286592/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:01:32] 2025-06-04 12:01:11,375 | INFO     | extracted standard info from prmon json
[2025-06-04 08:01:32] 2025-06-04 12:01:11,375 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:01:32] 2025-06-04 12:01:11,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:01:32] 2025-06-04 12:01:11,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:01:32] 2025-06-04 12:01:11,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:01:32] 2025-06-04 12:01:11,382 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:01:32] 2025-06-04 12:01:11,382 | INFO     | sum of square deviations: 106337061.4857144
[2025-06-04 08:01:32] 2025-06-04 12:01:11,382 | INFO     | sum of deviations: 5918488033.600001
[2025-06-04 08:01:32] 2025-06-04 12:01:11,382 | INFO     | mean x: 1749036184.5142858
[2025-06-04 08:01:32] 2025-06-04 12:01:11,382 | INFO     | mean y: 2274756.4
[2025-06-04 08:01:32] 2025-06-04 12:01:11,382 | INFO     | -- intersect: -97345250027.06293
[2025-06-04 08:01:32] 2025-06-04 12:01:11,382 | INFO     | intersect: -97345250027.06293
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | chi2: 0.9742550941929664
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | -- intersect: -97345250027.06293
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | current memory leak: 55.66 B/s (using 70 data points, chi2=0.97)
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | ..............................
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | . Timing measurements:
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | . get job = 0 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | . initial setup = 2 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | . payload setup = 8 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,383 | INFO     | . stage-in = 0 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,384 | INFO     | . payload execution = 4687 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,384 | INFO     | . stage-out = 0 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,384 | INFO     | . log creation = 0 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,384 | INFO     | ..............................
[2025-06-04 08:01:32] 2025-06-04 12:01:11,463 | INFO     | 
[2025-06-04 08:01:32] 2025-06-04 12:01:11,463 | INFO     | job summary report
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | --------------------------------------------------
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | PanDA job id: 6678286592
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | task id: 45006595
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | errors: (none)
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | pilot state: finished 
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | transexitcode: 0
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | exeerrorcode: 0
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | exeerrordiag: 
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | exitcode: 0
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | exitmsg: OK
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | cpuconsumptiontime: 28010 s
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | nevents: 400
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | neventsw: 0
[2025-06-04 08:01:32] 2025-06-04 12:01:11,464 | INFO     | pid: 1794727
[2025-06-04 08:01:32] 2025-06-04 12:01:11,465 | INFO     | pgrp: 1794727
[2025-06-04 08:01:32] 2025-06-04 12:01:11,465 | INFO     | corecount: 8
[2025-06-04 08:01:32] 2025-06-04 12:01:11,465 | INFO     | event service: False
[2025-06-04 08:01:32] 2025-06-04 12:01:11,465 | INFO     | sizes: {0: 2405007, 1: 2405206, 7: 2405412, 11: 2405440, 4700: 2431527, 4702: 2440652, 4711: 2440766}
[2025-06-04 08:01:32] 2025-06-04 12:01:11,465 | INFO     | --------------------------------------------------
[2025-06-04 08:01:32] 2025-06-04 12:01:11,465 | INFO     | 
[2025-06-04 08:01:32] 2025-06-04 12:01:11,465 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:01:32] 2025-06-04 12:01:11,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | job 6678286592 has completed (purged errors)
[2025-06-04 08:01:32] 2025-06-04 12:01:11,506 | INFO     | overall cleanup function is called
[2025-06-04 08:01:32] 2025-06-04 12:01:12,515 | INFO     | --- collectZombieJob: --- 10, [1794727]
[2025-06-04 08:01:32] 2025-06-04 12:01:12,515 | INFO     | zombie collector waiting for pid 1794727
[2025-06-04 08:01:32] 2025-06-04 12:01:12,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:01:32] 2025-06-04 12:01:12,516 | INFO     | collected zombie processes
[2025-06-04 08:01:32] 2025-06-04 12:01:12,516 | INFO     | will attempt to kill all subprocesses of pid=1794727
[2025-06-04 08:01:32] 2025-06-04 12:01:13,015 | INFO     | process IDs to be killed: [1794727] (in reverse order)
[2025-06-04 08:01:32] 2025-06-04 12:01:13,176 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:01:32] 2025-06-04 12:01:13,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:01:32] 2025-06-04 12:01:13,201 | INFO     | did not find any defunct processes belonging to 1794727
[2025-06-04 08:01:32] 2025-06-04 12:01:13,223 | INFO     | did not find any defunct processes belonging to 1794727
[2025-06-04 08:01:32] 2025-06-04 12:01:13,223 | INFO     | ready for new job
[2025-06-04 08:01:32] 2025-06-04 12:01:13,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:01:32] 2025-06-04 12:01:13,224 | INFO     | **************************************
[2025-06-04 08:01:32] 2025-06-04 12:01:13,225 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:01:32] 2025-06-04 12:01:13,225 | INFO     | **************************************
[2025-06-04 08:01:32] 2025-06-04 12:01:13,225 | INFO     | 
[2025-06-04 08:01:32] 2025-06-04 12:01:13,230 | INFO     | architecture information:
[2025-06-04 08:01:32] 2025-06-04 12:01:13,230 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:01:32] 2025-06-04 12:01:13,247 | INFO     | cat /etc/os-release:
[2025-06-04 08:01:32] NAME="CentOS Linux"
[2025-06-04 08:01:32] VERSION="7 (Core)"
[2025-06-04 08:01:32] ID="centos"
[2025-06-04 08:01:32] ID_LIKE="rhel fedora"
[2025-06-04 08:01:32] VERSION_ID="7"
[2025-06-04 08:01:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:01:32] ANSI_COLOR="0;31"
[2025-06-04 08:01:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:01:32] HOME_URL="https://www.centos.org/"
[2025-06-04 08:01:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:01:32] 
[2025-06-04 08:01:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:01:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:01:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:01:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:01:32] 
[2025-06-04 08:01:32] 2025-06-04 12:01:13,247 | INFO     | **************************************
[2025-06-04 08:01:32] 2025-06-04 12:01:13,750 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:01:32] 2025-06-04 12:01:13,772 | INFO     | sufficient remaining disk space (75729207296 B)
[2025-06-04 08:01:32] 2025-06-04 12:01:13,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:01:32] 2025-06-04 12:01:13,773 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:01:32] 2025-06-04 12:01:13,773 | INFO     | update_server=False
[2025-06-04 08:01:32] 2025-06-04 12:01:13,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:01:32] 2025-06-04 12:01:13,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:01:32] 2025-06-04 12:01:13,774 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:01:32] 2025-06-04 12:01:13,774 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:01:32] 2025-06-04 12:01:13,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:01:32] 2025-06-04 12:01:13,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:01:32] 2025-06-04 12:01:13,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:01:32] 2025-06-04 12:01:14,065 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:01:32] 2025-06-04 12:01:14,068 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:01:32] 2025-06-04 12:01:14,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:32] 2025-06-04 12:01:14,068 | INFO     | will abort loop
[2025-06-04 08:01:32] 2025-06-04 12:01:14,139 | INFO     | all job control threads have been joined
[2025-06-04 08:01:32] 2025-06-04 12:01:14,260 | INFO     | all payload control threads have been joined
[2025-06-04 08:01:32] 2025-06-04 12:01:14,312 | INFO     | all data control threads have been joined
[2025-06-04 08:01:32] 2025-06-04 12:01:14,779 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:14,880 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,044 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,073 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,144 | INFO     | [job] control thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,195 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,265 | INFO     | [payload] control thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,317 | INFO     | [data] control thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,685 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,783 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:15,865 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:16,050 | INFO     | [job] validate thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:16,246 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:16,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:32] 2025-06-04 12:01:17,492 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:17,786 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:24,483 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:01:32] 2025-06-04 12:01:25,488 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:01:32] 2025-06-04 12:01:26,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761120786240)>', '<ExcThread(monitor, started 139760618157824)>']
[2025-06-04 08:01:32] 2025-06-04 12:01:27,855 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:01:32] 2025-06-04 12:01:27,855 | INFO     | [monitor] control thread has ended
[2025-06-04 08:01:32] 2025-06-04 12:01:32,022 | INFO     | all workflow threads have been joined
[2025-06-04 08:01:32] 2025-06-04 12:01:32,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:01:32] 2025-06-04 12:01:32,022 | INFO     | traces error code: 0
[2025-06-04 08:01:32] 2025-06-04 12:01:32,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:01:32] 2025-06-04 12:01:32,190 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:01:32] 2025-06-04 12:01:32,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:01:32] 2025-06-04 12:01:32,197 [wrapper] pilotpid: 1787204
[2025-06-04 08:01:32] 2025-06-04 12:01:32,199 [wrapper] Pilot exit status: 0
[2025-06-04 08:01:32] 2025-06-04 12:01:32,241 [wrapper] pandaids: 6678286592
[2025-06-04 08:01:32] 2025-06-04 12:01:32,360 [wrapper] cleanup supervisor_pilot 2441043 1787205
[2025-06-04 08:01:32] 2025-06-04 12:01:32,365 [wrapper] Test setup, not cleaning
[2025-06-04 08:01:32] 2025-06-04 12:01:32,368 [wrapper] apfmon messages muted
[2025-06-04 08:01:32] 2025-06-04 12:01:32,370 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:01:32] 2025-06-04 12:01:32,372 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:01:32]  *** Error codes and diagnostics ***
[2025-06-04 08:01:32]     "exeErrorCode": 0,
[2025-06-04 08:01:32]     "exeErrorDiag": "",
[2025-06-04 08:01:32]     "pilotErrorCode": 0,
[2025-06-04 08:01:32]     "pilotErrorDiag": "",
[2025-06-04 08:01:32]  *** Listing of results directory ***
[2025-06-04 08:01:32] total 389048
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 23:13 queuedata.json
[2025-06-04 08:01:32] -rwx------. 1 boincer umatlas     37140 Jun  3 23:13 runpilot2-wrapper.sh
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:01:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:42 run_atlas
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:42 job.xml
[2025-06-04 08:01:32] -rw-r--r--. 2 boincer umatlas 216410209 Jun  4 06:42 EVNT.45006593._002064.pool.root.1
[2025-06-04 08:01:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:42 start_atlas.sh
[2025-06-04 08:01:32] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:42 shared
[2025-06-04 08:01:32] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 06:42 input.tar.gz
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:42 boinc_lockfile
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 06:42 pandaJob.out
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas    986812 Jun  4 06:42 agis_schedconf.cvmfs.json
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:01:32] drwx------. 4 boincer umatlas      4096 Jun  4 06:42 pilot3
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 07:54 init_data.xml
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas 176642540 Jun  4 08:00 HITS.45006595._051505.pool.root.1
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas        95 Jun  4 08:00 pilot_heartbeat.json
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:00 boinc_task_state.xml
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas      1040 Jun  4 08:00 memory_monitor_summary.json
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas    289784 Jun  4 08:01 log.45006595._051505.job.log.tgz.1
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas      7698 Jun  4 08:01 heartbeat.json
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:01 boinc_mmap_file
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:01 wrapper_checkpoint.txt
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas      4734 Jun  4 08:01 pilotlog.txt
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas    455980 Jun  4 08:01 log.45006595._051505.job.log.1
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas       357 Jun  4 08:01 output.list
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:01 runtime_log
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas    768000 Jun  4 08:01 result.tar.gz
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas       653 Jun  4 08:01 u1NODmXktg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN2mKDmcplLsn.diag
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 08:01 runtime_log.err
[2025-06-04 08:01:32] -rw-r--r--. 1 boincer umatlas     21702 Jun  4 08:01 stderr.txt
[2025-06-04 08:01:32] HITS file was successfully produced:
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas 176642540 Jun  4 08:00 shared/HITS.pool.root.1
[2025-06-04 08:01:32]  *** Contents of shared directory: ***
[2025-06-04 08:01:32] total 385120
[2025-06-04 08:01:32] -rw-r--r--. 2 boincer umatlas 216410209 Jun  4 06:42 ATLAS.root_0
[2025-06-04 08:01:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:42 start_atlas.sh
[2025-06-04 08:01:32] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 06:42 input.tar.gz
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas 176642540 Jun  4 08:00 HITS.pool.root.1
[2025-06-04 08:01:32] -rw-------. 1 boincer umatlas    768000 Jun  4 08:01 result.tar.gz
08:01:54 (1783421): run_atlas exited; CPU time 28209.586558
08:01:54 (1783421): called boinc_finish(0)

</stderr_txt>
]]>

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