Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:46:26 (2373101): wrapper (7.7.26015): starting
03:46:26 (2373101): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 03:46:26] Arguments: --nthreads 12
[2025-06-04 03:46:26] Threads: 12
[2025-06-04 03:46:26] Checking for CVMFS
[2025-06-04 03:46:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:46:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:46:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:46:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:46:27] 2.11.5.0 1091500 23539 242760 146777 0 674 33316778 45568000 18048 130560 0 231810993 99.799 142102044 27886 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 03:46:27] CVMFS is ok
[2025-06-04 03:46:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:46:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:46:27] Further information can be found at the LHC@home message board.
[2025-06-04 03:46:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:46:27] Checking for apptainer binary...
[2025-06-04 03:46:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:46:27] Running /usr/bin/apptainer --version
[2025-06-04 03:46:27] apptainer version 1.4.0-1.el9
[2025-06-04 03:46:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:46:27] wns0067.triumf.lcg
[2025-06-04 03:46:27] apptainer works
[2025-06-04 03:46:27] Set ATHENA_PROC_NUMBER=12
[2025-06-04 03:46:27] Set ATHENA_CORE_NUMBER=12
[2025-06-04 03:46:27] Starting ATLAS job with PandaID=6678900247
[2025-06-04 03:46:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:49:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | extracted standard info from prmon json
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | found no stored workdir sizes
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | WARNING  | wrong length of table data, x=[1749034027.0], y=[1142.0] (must be same and length>=4)
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | ..............................
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . Timing measurements:
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . get job = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . initial setup = 3 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . payload setup = 5 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . stage-in = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . payload execution = 21 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . stage-out = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . log creation = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | ..............................
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 03:49:41] 2025-06-04 10:49:27,613 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678900247/pilotlog.txt
[2025-06-04 03:49:41] 2025-06-04 10:49:27,623 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 03:49:41] - Log from pilotlog.txt -
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | extracted standard info from prmon json
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | found no stored workdir sizes
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | WARNING  | wrong length of table data, x=[1749034027.0], y=[1142.0] (must be same and length>=4)
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | ..............................
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . Timing measurements:
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . get job = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . initial setup = 3 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . payload setup = 5 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . stage-in = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . payload execution = 21 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . stage-out = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . log creation = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | ..............................
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 03:49:41] 2025-06-04 10:49:27,613 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678900247/pilotlog.txt
[2025-06-04 03:49:41] 2025-06-04 10:49:27,623 | WARNING  | 
[2025-06-04 03:49:41] [begin log extracts]
[2025-06-04 03:49:41] - Log from pilotlog.txt -
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | extracted standard info from prmon json
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | WARNING  | found no stored workdir sizes
[2025-06-04 03:49:41] 2025-06-04 10:49:27,611 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | WARNING  | wrong length of table data, x=[1749034027.0], y=[1142.0] (must be same and length>=4)
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | ..............................
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . Timing measurements:
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . get job = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . initial setup = 3 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . payload setup = 5 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . stage-in = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . payload execution = 21 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . stage-out = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | . log creation = 0 s
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | ..............................
[2025-06-04 03:49:41] 2025-06-04 10:49:27,612 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 03:49:41] 2025-06-04 10:49:27,613 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678900247/pilotlog.txt
[2025-06-04 03:49:41] [end log extracts]
[2025-06-04 03:49:41] 2025-06-04 10:49:27,624 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 03:49:41] 2025-06-04 10:49:27,624 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 03:49:41] 2025-06-04 10:49:28,067 | INFO     | 
[2025-06-04 03:49:41] 2025-06-04 10:49:28,067 | INFO     | job summary report
[2025-06-04 03:49:41] 2025-06-04 10:49:28,067 | INFO     | --------------------------------------------------
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | PanDA job id: 6678900247
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | task id: 45006595
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 03:47:16,350 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | pilot state: failed 
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | transexitcode: 65
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | exeerrorcode: 65
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | exitcode: 65
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | cpuconsumptiontime: 15 s
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | nevents: 0
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | neventsw: 0
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | pid: 2383026
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | pgrp: 2383026
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | corecount: 12
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | event service: False
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | sizes: {0: 2404300, 1: 2405153, 5: 2405359, 11: 2405415, 31: 2428533, 32: 2432768, 33: 2432924, 154: 2433094}
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | --------------------------------------------------
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | 
[2025-06-04 03:49:41] 2025-06-04 10:49:28,068 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | job 6678900247 has completed (purged errors)
[2025-06-04 03:49:41] 2025-06-04 10:49:28,084 | INFO     | overall cleanup function is called
[2025-06-04 03:49:41] 2025-06-04 10:49:29,091 | INFO     | --- collectZombieJob: --- 10, [2383026]
[2025-06-04 03:49:41] 2025-06-04 10:49:29,091 | INFO     | zombie collector waiting for pid 2383026
[2025-06-04 03:49:41] 2025-06-04 10:49:29,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:49:41] 2025-06-04 10:49:29,091 | INFO     | collected zombie processes
[2025-06-04 03:49:41] 2025-06-04 10:49:29,092 | INFO     | will attempt to kill all subprocesses of pid=2383026
[2025-06-04 03:49:41] 2025-06-04 10:49:29,422 | INFO     | process IDs to be killed: [2383026] (in reverse order)
[2025-06-04 03:49:41] 2025-06-04 10:49:29,634 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:49:41] 2025-06-04 10:49:29,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:49:41] 2025-06-04 10:49:29,645 | INFO     | did not find any defunct processes belonging to 2383026
[2025-06-04 03:49:41] 2025-06-04 10:49:29,654 | INFO     | did not find any defunct processes belonging to 2383026
[2025-06-04 03:49:41] 2025-06-04 10:49:29,655 | INFO     | ready for new job
[2025-06-04 03:49:41] 2025-06-04 10:49:29,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:49:41] 2025-06-04 10:49:29,656 | INFO     | **************************************
[2025-06-04 03:49:41] 2025-06-04 10:49:29,656 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:49:41] 2025-06-04 10:49:29,656 | INFO     | **************************************
[2025-06-04 03:49:41] 2025-06-04 10:49:29,656 | INFO     | 
[2025-06-04 03:49:41] 2025-06-04 10:49:29,658 | INFO     | architecture information:
[2025-06-04 03:49:41] 2025-06-04 10:49:29,658 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:49:41] 2025-06-04 10:49:29,674 | INFO     | cat /etc/os-release:
[2025-06-04 03:49:41] NAME="CentOS Linux"
[2025-06-04 03:49:41] VERSION="7 (Core)"
[2025-06-04 03:49:41] ID="centos"
[2025-06-04 03:49:41] ID_LIKE="rhel fedora"
[2025-06-04 03:49:41] VERSION_ID="7"
[2025-06-04 03:49:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:49:41] ANSI_COLOR="0;31"
[2025-06-04 03:49:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:49:41] HOME_URL="https://www.centos.org/"
[2025-06-04 03:49:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:49:41] 
[2025-06-04 03:49:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:49:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:49:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:49:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:49:41] 
[2025-06-04 03:49:41] 2025-06-04 10:49:29,675 | INFO     | **************************************
[2025-06-04 03:49:41] 2025-06-04 10:49:30,178 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 03:49:41] 2025-06-04 10:49:30,204 | INFO     | sufficient remaining disk space (1715785957376 B)
[2025-06-04 03:49:41] 2025-06-04 10:49:30,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:49:41] 2025-06-04 10:49:30,204 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:49:41] 2025-06-04 10:49:30,204 | INFO     | update_server=False
[2025-06-04 03:49:41] 2025-06-04 10:49:30,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:49:41] 2025-06-04 10:49:30,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:49:41] 2025-06-04 10:49:30,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:49:41] 2025-06-04 10:49:30,243 | INFO     | all data control threads have been joined
[2025-06-04 03:49:41] 2025-06-04 10:49:30,573 | INFO     | all payload control threads have been joined
[2025-06-04 03:49:41] 2025-06-04 10:49:30,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:49:41] 2025-06-04 10:49:30,839 | INFO     | aborting loop
[2025-06-04 03:49:41] 2025-06-04 10:49:31,024 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:49:41] 2025-06-04 10:49:31,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:49:41] 2025-06-04 10:49:31,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:49:41] 2025-06-04 10:49:31,209 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:31,249 | INFO     | [data] control thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:31,390 | INFO     | all job control threads have been joined
[2025-06-04 03:49:41] 2025-06-04 10:49:31,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:31,579 | INFO     | [payload] control thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:31,846 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:31,860 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,026 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,191 | INFO     | [job] validate thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,211 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,360 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,396 | INFO     | [job] control thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,397 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,492 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,518 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:32,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:49:41] 2025-06-04 10:49:33,722 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:34,213 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:49:41] 2025-06-04 10:49:36,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394315282240)>', '<ExcThread(monitor, started 140393916114688)>']
[2025-06-04 03:49:41] 2025-06-04 10:49:37,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:49:41] 2025-06-04 10:49:37,066 | INFO     | [monitor] control thread has ended
[2025-06-04 03:49:41] 2025-06-04 10:49:41,171 | INFO     | all workflow threads have been joined
[2025-06-04 03:49:41] 2025-06-04 10:49:41,171 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:49:41] 2025-06-04 10:49:41,171 | INFO     | traces error code: 0
[2025-06-04 03:49:41] 2025-06-04 10:49:41,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:49:41] 2025-06-04 10:49:41,298 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:49:41] 2025-06-04 10:49:41,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:49:41] 2025-06-04 10:49:41,302 [wrapper] pilotpid: 2376681
[2025-06-04 03:49:41] 2025-06-04 10:49:41,304 [wrapper] Pilot exit status: 0
[2025-06-04 03:49:41] 2025-06-04 10:49:41,327 [wrapper] pandaids: 6678900247
[2025-06-04 03:49:41] 2025-06-04 10:49:41,383 [wrapper] cleanup supervisor_pilot 2376687 2376682
[2025-06-04 03:49:41] 2025-06-04 10:49:41,387 [wrapper] Test setup, not cleaning
[2025-06-04 03:49:41] 2025-06-04 10:49:41,396 [wrapper] apfmon messages muted
[2025-06-04 03:49:41] 2025-06-04 10:49:41,398 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:49:41] 2025-06-04 10:49:41,401 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:49:41]  *** Error codes and diagnostics ***
[2025-06-04 03:49:41]     "exeErrorCode": 65,
[2025-06-04 03:49:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 03:49:41]     "pilotErrorCode": 1305,
[2025-06-04 03:49:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 03:49:41]  *** Listing of results directory ***
[2025-06-04 03:49:41] total 215208
[2025-06-04 03:49:41] -rwx------. 1 boinc boinc     37140 Jun  4 01:31 runpilot2-wrapper.sh
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:31 pilot3.tar.gz
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:32 queuedata.json
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:49:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:46 run_atlas
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:46 job.xml
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc      6601 Jun  4 03:46 init_data.xml
[2025-06-04 03:49:41] -rw-r--r--. 2 boinc boinc 216355780 Jun  4 03:46 EVNT.45006593._000284.pool.root.1
[2025-06-04 03:49:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:46 start_atlas.sh
[2025-06-04 03:49:41] drwxrwx--x. 2 boinc boinc      4096 Jun  4 03:46 shared
[2025-06-04 03:49:41] -rw-r--r--. 2 boinc boinc    508878 Jun  4 03:46 input.tar.gz
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:46 boinc_lockfile
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc      2522 Jun  4 03:46 pandaJob.out
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc    986812 Jun  4 03:46 agis_schedconf.cvmfs.json
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc   1603667 Jun  4 03:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:49:41] drwx------. 4 boinc boinc      4096 Jun  4 03:46 pilot3
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc       945 Jun  4 03:47 memory_monitor_summary.json
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc     20349 Jun  4 03:47 log.45006595._055675.job.log.tgz.1
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc        95 Jun  4 03:48 pilot_heartbeat.json
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc      8307 Jun  4 03:49 heartbeat.json
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc       523 Jun  4 03:49 boinc_task_state.xml
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc      8192 Jun  4 03:49 boinc_mmap_file
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc        22 Jun  4 03:49 wrapper_checkpoint.txt
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc      4352 Jun  4 03:49 pilotlog.txt
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc     73119 Jun  4 03:49 log.45006595._055675.job.log.1
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc       188 Jun  4 03:49 output.list
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc       620 Jun  4 03:49 runtime_log
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc    112640 Jun  4 03:49 result.tar.gz
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc       645 Jun  4 03:49 ucLNDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzmnKDmmOLYfm.diag
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc      8484 Jun  4 03:49 runtime_log.err
[2025-06-04 03:49:41] -rw-r--r--. 1 boinc boinc     21451 Jun  4 03:49 stderr.txt
[2025-06-04 03:49:41] No HITS result produced
[2025-06-04 03:49:41]  *** Contents of shared directory: ***
[2025-06-04 03:49:41] total 211916
[2025-06-04 03:49:41] -rw-r--r--. 2 boinc boinc 216355780 Jun  4 03:46 ATLAS.root_0
[2025-06-04 03:49:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:46 start_atlas.sh
[2025-06-04 03:49:41] -rw-r--r--. 2 boinc boinc    508878 Jun  4 03:46 input.tar.gz
[2025-06-04 03:49:41] -rw-------. 1 boinc boinc    112640 Jun  4 03:49 result.tar.gz
03:49:42 (2373101): run_atlas exited; CPU time 21.055253
03:49:42 (2373101): called boinc_finish(0)

</stderr_txt>
]]>

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