Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:40:02 (205382): wrapper (7.7.26015): starting
07:40:02 (205382): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 07:40:02] Arguments: --nthreads 9
[2025-06-04 07:40:02] Threads: 9
[2025-06-04 07:40:02] Checking for CVMFS
[2025-06-04 07:40:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:40:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:40:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:40:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:40:03] 2.11.2.0 6627 28735 228112 146779 3 329 15130050 18432000 7595 130560 0 74143477 99.469 77854202 31501 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:40:03] CVMFS is ok
[2025-06-04 07:40:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:40:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:40:03] Further information can be found at the LHC@home message board.
[2025-06-04 07:40:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:40:03] Checking for apptainer binary...
[2025-06-04 07:40:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:40:03] Running /usr/bin/apptainer --version
[2025-06-04 07:40:03] apptainer version 1.3.2-1.el7
[2025-06-04 07:40:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:40:04] c-210-35-1.aglt2.org
[2025-06-04 07:40:04] apptainer works
[2025-06-04 07:40:04] Set ATHENA_PROC_NUMBER=9
[2025-06-04 07:40:04] Set ATHENA_CORE_NUMBER=9
[2025-06-04 07:40:04] Starting ATLAS job with PandaID=6678285988
[2025-06-04 07:40:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:11:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:11:52] 2025-06-04 13:11:22,123 | INFO     | will send heartbeat for job in 'finished' state
[2025-06-04 09:11:52] 2025-06-04 13:11:22,123 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-06-04 09:11:52] 2025-06-04 13:11:22,123 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:11:52] 2025-06-04 13:11:22,123 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:11:52] 2025-06-04 13:11:22,123 | INFO     | job 6678285988 has state 'running' - writing heartbeat
[2025-06-04 09:11:52] 2025-06-04 13:11:22,124 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:11:52] 2025-06-04 13:11:22,128 | INFO     | executing command: lscpu
[2025-06-04 09:11:52] 2025-06-04 13:11:22,242 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:11:52] 2025-06-04 13:11:23,624 | INFO     | job 6678285988 has state=finished
[2025-06-04 09:11:52] 2025-06-04 13:11:23,625 | INFO     | preparing for final server update for job 6678285988 in state='finished'
[2025-06-04 09:11:52] 2025-06-04 13:11:23,625 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:11:52] 2025-06-04 13:11:23,625 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:11:52] 2025-06-04 13:11:23,625 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:11:52] 2025-06-04 13:11:23,625 | INFO     | job 6678285988 has finished - writing final server update
[2025-06-04 09:11:52] 2025-06-04 13:11:23,626 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:11:52] 2025-06-04 13:11:23,628 | INFO     | executing command: lscpu
[2025-06-04 09:11:52] 2025-06-04 13:11:27,502 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:11:52] 2025-06-04 13:11:27,506 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678285988/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:11:52] 2025-06-04 13:11:27,508 | INFO     | extracted standard info from prmon json
[2025-06-04 09:11:52] 2025-06-04 13:11:27,508 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:11:52] 2025-06-04 13:11:27,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:11:52] 2025-06-04 13:11:27,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:11:52] 2025-06-04 13:11:27,510 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:11:52] 2025-06-04 13:11:27,513 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:11:52] 2025-06-04 13:11:27,513 | INFO     | sum of square deviations: 170940332.4512196
[2025-06-04 09:11:52] 2025-06-04 13:11:27,514 | INFO     | sum of deviations: -5382167883.804879
[2025-06-04 09:11:52] 2025-06-04 13:11:27,514 | INFO     | mean x: 1749040028.5243902
[2025-06-04 09:11:52] 2025-06-04 13:11:27,514 | INFO     | mean y: 2575739.9024390243
[2025-06-04 09:11:52] 2025-06-04 13:11:27,514 | INFO     | -- intersect: 55072242061.625916
[2025-06-04 09:11:52] 2025-06-04 13:11:27,514 | INFO     | intersect: 55072242061.625916
[2025-06-04 09:11:52] 2025-06-04 13:11:27,514 | INFO     | chi2: 0.013298504292925515
[2025-06-04 09:11:52] 2025-06-04 13:11:27,515 | INFO     | -- intersect: 55072242061.625916
[2025-06-04 09:11:52] 2025-06-04 13:11:27,515 | INFO     | current memory leak: -31.49 B/s (using 82 data points, chi2=0.01)
[2025-06-04 09:11:52] 2025-06-04 13:11:27,541 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:11:52] 2025-06-04 13:11:30,017 | INFO     | monitor loop #407: job 0:6678285988 is in state 'finished'
[2025-06-04 09:11:52] 2025-06-04 13:11:30,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:11:52] 2025-06-04 13:11:32,517 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:11:52] 2025-06-04 13:11:32,517 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678285988/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:11:52] 2025-06-04 13:11:32,518 | INFO     | extracted standard info from prmon json
[2025-06-04 09:11:52] 2025-06-04 13:11:32,518 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:11:52] 2025-06-04 13:11:32,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:11:52] 2025-06-04 13:11:32,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:11:52] 2025-06-04 13:11:32,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:11:52] 2025-06-04 13:11:32,520 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:11:52] 2025-06-04 13:11:32,520 | INFO     | sum of square deviations: 170940332.4512196
[2025-06-04 09:11:52] 2025-06-04 13:11:32,521 | INFO     | monitor loop #408: job 0:6678285988 is in state 'finished'
[2025-06-04 09:11:52] 2025-06-04 13:11:32,521 | INFO     | sum of deviations: -5382167883.804879
[2025-06-04 09:11:52] 2025-06-04 13:11:32,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:11:52] 2025-06-04 13:11:32,521 | INFO     | mean x: 1749040028.5243902
[2025-06-04 09:11:52] 2025-06-04 13:11:32,522 | INFO     | mean y: 2575739.9024390243
[2025-06-04 09:11:52] 2025-06-04 13:11:32,522 | INFO     | -- intersect: 55072242061.625916
[2025-06-04 09:11:52] 2025-06-04 13:11:32,522 | INFO     | intersect: 55072242061.625916
[2025-06-04 09:11:52] 2025-06-04 13:11:32,522 | INFO     | chi2: 0.013298504292925515
[2025-06-04 09:11:52] 2025-06-04 13:11:32,522 | INFO     | -- intersect: 55072242061.625916
[2025-06-04 09:11:52] 2025-06-04 13:11:32,522 | INFO     | current memory leak: -31.49 B/s (using 82 data points, chi2=0.01)
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | ..............................
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . Timing measurements:
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . get job = 0 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . initial setup = 2 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . payload setup = 8 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . stage-in = 0 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . payload execution = 5427 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . stage-out = 0 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | . log creation = 0 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,523 | INFO     | ..............................
[2025-06-04 09:11:52] 2025-06-04 13:11:32,612 | INFO     | 
[2025-06-04 09:11:52] 2025-06-04 13:11:32,612 | INFO     | job summary report
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | --------------------------------------------------
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | PanDA job id: 6678285988
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | task id: 45006595
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | errors: (none)
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | pilot state: finished 
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | transexitcode: 0
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | exeerrorcode: 0
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | exeerrordiag: 
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | exitcode: 0
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | exitmsg: OK
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | cpuconsumptiontime: 34365 s
[2025-06-04 09:11:52] 2025-06-04 13:11:32,613 | INFO     | nevents: 400
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | neventsw: 0
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | pid: 217515
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | pgrp: 217515
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | corecount: 9
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | event service: False
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | sizes: {0: 2397340, 7: 2397546, 11: 2397574, 5438: 2423975, 5439: 2432916, 5442: 2432972, 5454: 2433270}
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | --------------------------------------------------
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | 
[2025-06-04 09:11:52] 2025-06-04 13:11:32,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:11:52] 2025-06-04 13:11:32,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | job 6678285988 has completed (purged errors)
[2025-06-04 09:11:52] 2025-06-04 13:11:32,651 | INFO     | overall cleanup function is called
[2025-06-04 09:11:52] 2025-06-04 13:11:33,658 | INFO     | --- collectZombieJob: --- 10, [217515]
[2025-06-04 09:11:52] 2025-06-04 13:11:33,658 | INFO     | zombie collector waiting for pid 217515
[2025-06-04 09:11:52] 2025-06-04 13:11:33,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:11:52] 2025-06-04 13:11:33,659 | INFO     | collected zombie processes
[2025-06-04 09:11:52] 2025-06-04 13:11:33,659 | INFO     | will attempt to kill all subprocesses of pid=217515
[2025-06-04 09:11:52] 2025-06-04 13:11:34,073 | INFO     | PID=209020 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 09:11:52] 2025-06-04 13:11:34,074 | INFO     | .. there are 10 such processes running
[2025-06-04 09:11:52] 2025-06-04 13:11:34,092 | INFO     | process IDs to be killed: [217515] (in reverse order)
[2025-06-04 09:11:52] 2025-06-04 13:11:34,507 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:11:52] 2025-06-04 13:11:34,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:11:52] 2025-06-04 13:11:34,512 | INFO     | did not find any defunct processes belonging to 217515
[2025-06-04 09:11:52] 2025-06-04 13:11:34,515 | INFO     | did not find any defunct processes belonging to 217515
[2025-06-04 09:11:52] 2025-06-04 13:11:34,516 | INFO     | ready for new job
[2025-06-04 09:11:52] 2025-06-04 13:11:34,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:11:52] 2025-06-04 13:11:34,517 | INFO     | **************************************
[2025-06-04 09:11:52] 2025-06-04 13:11:34,517 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:11:52] 2025-06-04 13:11:34,517 | INFO     | **************************************
[2025-06-04 09:11:52] 2025-06-04 13:11:34,517 | INFO     | 
[2025-06-04 09:11:52] 2025-06-04 13:11:34,519 | INFO     | architecture information:
[2025-06-04 09:11:52] 2025-06-04 13:11:34,519 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:11:52] 2025-06-04 13:11:34,553 | INFO     | cat /etc/os-release:
[2025-06-04 09:11:52] NAME="CentOS Linux"
[2025-06-04 09:11:52] VERSION="7 (Core)"
[2025-06-04 09:11:52] ID="centos"
[2025-06-04 09:11:52] ID_LIKE="rhel fedora"
[2025-06-04 09:11:52] VERSION_ID="7"
[2025-06-04 09:11:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:11:52] ANSI_COLOR="0;31"
[2025-06-04 09:11:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:11:52] HOME_URL="https://www.centos.org/"
[2025-06-04 09:11:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:11:52] 
[2025-06-04 09:11:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:11:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:11:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:11:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:11:52] 
[2025-06-04 09:11:52] 2025-06-04 13:11:34,554 | INFO     | **************************************
[2025-06-04 09:11:52] 2025-06-04 13:11:35,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:11:52] 2025-06-04 13:11:35,122 | INFO     | sufficient remaining disk space (56243519488 B)
[2025-06-04 09:11:52] 2025-06-04 13:11:35,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:11:52] 2025-06-04 13:11:35,123 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:11:52] 2025-06-04 13:11:35,123 | INFO     | update_server=False
[2025-06-04 09:11:52] 2025-06-04 13:11:35,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:11:52] 2025-06-04 13:11:35,141 | INFO     | all job control threads have been joined
[2025-06-04 09:11:52] 2025-06-04 13:11:35,270 | INFO     | all data control threads have been joined
[2025-06-04 09:11:52] 2025-06-04 13:11:36,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:11:52] 2025-06-04 13:11:36,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:11:52] 2025-06-04 13:11:36,031 | INFO     | aborting loop
[2025-06-04 09:11:52] 2025-06-04 13:11:36,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:11:52] 2025-06-04 13:11:36,080 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:11:52] 2025-06-04 13:11:36,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:11:52] 2025-06-04 13:11:36,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:11:52] 2025-06-04 13:11:36,123 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:36,147 | INFO     | [job] control thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:36,231 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:36,276 | INFO     | [data] control thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:36,473 | INFO     | all payload control threads have been joined
[2025-06-04 09:11:52] 2025-06-04 13:11:36,959 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,008 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,037 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,230 | INFO     | [job] validate thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,270 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,478 | INFO     | [payload] control thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,540 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,620 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:37,642 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:11:52] 2025-06-04 13:11:38,031 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:38,647 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:40,084 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:45,489 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:11:52] 2025-06-04 13:11:46,494 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:11:52] 2025-06-04 13:11:47,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268746868544)>', '<ExcThread(monitor, started 140267650803456)>']
[2025-06-04 09:11:52] 2025-06-04 13:11:48,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:11:52] 2025-06-04 13:11:48,138 | INFO     | [monitor] control thread has ended
[2025-06-04 09:11:52] 2025-06-04 13:11:52,465 | INFO     | all workflow threads have been joined
[2025-06-04 09:11:52] 2025-06-04 13:11:52,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:11:52] 2025-06-04 13:11:52,466 | INFO     | traces error code: 0
[2025-06-04 09:11:52] 2025-06-04 13:11:52,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:11:52] 2025-06-04 13:11:52,649 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:11:52] 2025-06-04 13:11:52,652 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:11:52] 2025-06-04 13:11:52,655 [wrapper] pilotpid: 209020
[2025-06-04 09:11:52] 2025-06-04 13:11:52,657 [wrapper] Pilot exit status: 0
[2025-06-04 09:11:52] 2025-06-04 13:11:52,668 [wrapper] pandaids: 6678285988
[2025-06-04 09:11:52] 2025-06-04 13:11:52,721 [wrapper] cleanup supervisor_pilot  61458 209021
[2025-06-04 09:11:52] 2025-06-04 13:11:52,724 [wrapper] Test setup, not cleaning
[2025-06-04 09:11:52] 2025-06-04 13:11:52,727 [wrapper] apfmon messages muted
[2025-06-04 09:11:52] 2025-06-04 13:11:52,729 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:11:52] 2025-06-04 13:11:52,732 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:11:52]  *** Error codes and diagnostics ***
[2025-06-04 09:11:52]     "exeErrorCode": 0,
[2025-06-04 09:11:52]     "exeErrorDiag": "",
[2025-06-04 09:11:52]     "pilotErrorCode": 0,
[2025-06-04 09:11:52]     "pilotErrorDiag": "",
[2025-06-04 09:11:52]  *** Listing of results directory ***
[2025-06-04 09:11:52] total 386780
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 09:11:52] -rwx------ 1 boincer umatlas     37140 Jun  3 23:06 runpilot2-wrapper.sh
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:06 queuedata.json
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:11:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:40 run_atlas
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:40 job.xml
[2025-06-04 09:11:52] -rw-r--r-- 2 boincer umatlas 215348893 Jun  4 07:40 EVNT.45006593._002047.pool.root.1
[2025-06-04 09:11:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:40 start_atlas.sh
[2025-06-04 09:11:52] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:40 shared
[2025-06-04 09:11:52] -rw-r--r-- 2 boincer umatlas    508874 Jun  4 07:40 input.tar.gz
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:40 boinc_lockfile
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 07:40 pandaJob.out
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas    986812 Jun  4 07:40 agis_schedconf.cvmfs.json
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas   1598969 Jun  4 07:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:11:52] drwx------ 4 boincer umatlas      4096 Jun  4 07:40 pilot3
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas        95 Jun  4 09:10 pilot_heartbeat.json
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas 175174370 Jun  4 09:10 HITS.45006595._051082.pool.root.1
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:10 boinc_task_state.xml
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas      1060 Jun  4 09:11 memory_monitor_summary.json
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas    316111 Jun  4 09:11 log.45006595._051082.job.log.tgz.1
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas      6353 Jun  4 09:11 init_data.xml
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas      7739 Jun  4 09:11 heartbeat.json
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:11 boinc_mmap_file
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:11 wrapper_checkpoint.txt
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas      4425 Jun  4 09:11 pilotlog.txt
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas    533483 Jun  4 09:11 log.45006595._051082.job.log.1
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas       357 Jun  4 09:11 output.list
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:11 runtime_log
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas    870400 Jun  4 09:11 result.tar.gz
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 09:11 runtime_log.err
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas       660 Jun  4 09:11 lIUMDmLdtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI0mKDmTPICtn.diag
[2025-06-04 09:11:52] -rw-r--r-- 1 boincer umatlas     21775 Jun  4 09:11 stderr.txt
[2025-06-04 09:11:52] HITS file was successfully produced:
[2025-06-04 09:11:52] -rw------- 1 boincer umatlas 175174370 Jun  4 09:10 shared/HITS.pool.root.1
[2025-06-04 09:11:52]  *** Contents of shared directory: ***
[2025-06-04 09:11:53] total 382752
[2025-06-04 09:11:53] -rw-r--r-- 2 boincer umatlas 215348893 Jun  4 07:40 ATLAS.root_0
[2025-06-04 09:11:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:40 start_atlas.sh
[2025-06-04 09:11:53] -rw-r--r-- 2 boincer umatlas    508874 Jun  4 07:40 input.tar.gz
[2025-06-04 09:11:53] -rw------- 1 boincer umatlas 175174370 Jun  4 09:10 HITS.pool.root.1
[2025-06-04 09:11:53] -rw------- 1 boincer umatlas    870400 Jun  4 09:11 result.tar.gz
09:11:54 (205382): run_atlas exited; CPU time 34440.112659
09:11:54 (205382): called boinc_finish(0)

</stderr_txt>
]]>

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