Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:26:37 (3651088): wrapper (7.7.26015): starting
12:26:37 (3651088): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 12:26:37] Arguments: --nthreads 4
[2025-06-04 12:26:37] Threads: 4
[2025-06-04 12:26:37] Checking for CVMFS
[2025-06-04 12:26:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:26:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:26:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:26:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:26:38] 2.12.7.0 963705 1194 56616 146779 1 56 3494124 4096000 6419 130560 0 7263164 99.998 316223 1556 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-06-04 12:26:38] CVMFS is ok
[2025-06-04 12:26:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:26:38] Checking for apptainer binary...
[2025-06-04 12:26:38] apptainer is not installed, using version from CVMFS
[2025-06-04 12:26:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:26:38] senture-z10pe-l
[2025-06-04 12:26:38] apptainer works
[2025-06-04 12:26:38] Set ATHENA_PROC_NUMBER=4
[2025-06-04 12:26:38] Set ATHENA_CORE_NUMBER=4
[2025-06-04 12:26:38] Starting ATLAS job with PandaID=6678363689
[2025-06-04 12:26:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:18:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:18:27] 2025-06-04 13:18:00,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:18:27] 2025-06-04 13:18:03,375 | INFO     | monitor loop #494: job 0:6678363689 is in state 'finished'
[2025-06-04 14:18:27] 2025-06-04 13:18:03,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:18:27] 2025-06-04 13:18:05,879 | INFO     | monitor loop #495: job 0:6678363689 is in state 'finished'
[2025-06-04 14:18:27] 2025-06-04 13:18:05,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:18:27] 2025-06-04 13:18:06,741 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 14:18:27] 2025-06-04 13:18:06,741 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6678363689/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:18:27] 2025-06-04 13:18:06,742 | INFO     | extracted standard info from prmon json
[2025-06-04 14:18:27] 2025-06-04 13:18:06,742 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:18:27] 2025-06-04 13:18:06,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:18:27] 2025-06-04 13:18:06,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:18:27] 2025-06-04 13:18:06,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:18:27] 2025-06-04 13:18:06,745 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:18:27] 2025-06-04 13:18:06,746 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,746 | INFO     | sum of deviations: -15153131695.000002
[2025-06-04 14:18:27] 2025-06-04 13:18:06,746 | INFO     | mean x: 1749039728.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,746 | INFO     | mean y: 2404236.4954128442
[2025-06-04 14:18:27] 2025-06-04 13:18:06,746 | INFO     | -- intersect: 66007993011.40611
[2025-06-04 14:18:27] 2025-06-04 13:18:06,747 | INFO     | intersect: 66007993011.40611
[2025-06-04 14:18:27] 2025-06-04 13:18:06,747 | INFO     | chi2: 1.1593077575939417
[2025-06-04 14:18:27] 2025-06-04 13:18:06,747 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,747 | INFO     | sum of deviations: -13598723778.000002
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | mean x: 1749039575.5
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | mean y: 2408732.3653846155
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | -- intersect: 68198502878.64504
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | intersect: 68198502878.64504
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | chi2: 1.1561239706403215
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | current chi2=1.1561239706403215 (change=0.2746282799166221 %)
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | right removable region: 103
[2025-06-04 14:18:27] 2025-06-04 13:18:06,748 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | sum of deviations: -23180642391.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | mean x: 1749039880.5
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | mean y: 2426441.9423076925
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | -- intersect: 116250801829.38785
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | intersect: 116250801829.38785
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | chi2: 0.07407128393090585
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | current chi2=0.07407128393090585 (change=93.61073162447947 %)
[2025-06-04 14:18:27] 2025-06-04 13:18:06,749 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | sum of deviations: -18954957671.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | mean x: 1749040033.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | mean y: 2412972.898989899
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | -- intersect: 110202737794.97617
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | intersect: 110202737794.97617
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | chi2: 0.06953035258145433
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | current chi2=0.06953035258145433 (change=6.130488238447885 %)
[2025-06-04 14:18:27] 2025-06-04 13:18:06,750 | INFO     | left removable region: 20
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | sum of deviations: -10369279407.000002
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | mean x: 1749040155.0
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | mean y: 2391486.686746988
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | -- intersect: 102307825574.20459
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | intersect: 102307825574.20459
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | chi2: 0.04282521868929862
[2025-06-04 14:18:27] 2025-06-04 13:18:06,751 | INFO     | -- intersect: 102307825574.20459
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | current memory leak: -58.49 B/s (using 83 data points, chi2=0.04)
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | ..............................
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | . Timing measurements:
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | . get job = 0 s
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | . initial setup = 2 s
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | . payload setup = 7 s
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | . stage-in = 0 s
[2025-06-04 14:18:27] 2025-06-04 13:18:06,752 | INFO     | . payload execution = 6645 s
[2025-06-04 14:18:27] 2025-06-04 13:18:06,753 | INFO     | . stage-out = 0 s
[2025-06-04 14:18:27] 2025-06-04 13:18:06,753 | INFO     | . log creation = 0 s
[2025-06-04 14:18:27] 2025-06-04 13:18:06,753 | INFO     | ..............................
[2025-06-04 14:18:27] 2025-06-04 13:18:07,216 | INFO     | 
[2025-06-04 14:18:27] 2025-06-04 13:18:07,216 | INFO     | job summary report
[2025-06-04 14:18:27] 2025-06-04 13:18:07,216 | INFO     | --------------------------------------------------
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | PanDA job id: 6678363689
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | task id: 45006595
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | errors: (none)
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | pilot state: finished 
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | transexitcode: 0
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | exeerrorcode: 0
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | exeerrordiag: 
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | exitcode: 0
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | exitmsg: OK
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | cpuconsumptiontime: 25555 s
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | nevents: 400
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | neventsw: 0
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | pid: 3661865
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | pgrp: 3661865
[2025-06-04 14:18:27] 2025-06-04 13:18:07,217 | INFO     | corecount: 4
[2025-06-04 14:18:27] 2025-06-04 13:18:07,218 | INFO     | event service: False
[2025-06-04 14:18:27] 2025-06-04 13:18:07,218 | INFO     | sizes: {0: 2405191, 4: 2405397, 11: 2405425, 6656: 2432455, 6657: 2441466, 6665: 2441580}
[2025-06-04 14:18:27] 2025-06-04 13:18:07,218 | INFO     | --------------------------------------------------
[2025-06-04 14:18:27] 2025-06-04 13:18:07,218 | INFO     | 
[2025-06-04 14:18:27] 2025-06-04 13:18:07,218 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-06-04 14:18:27] 2025-06-04 13:18:07,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:18:27] 2025-06-04 13:18:07,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:18:27] 2025-06-04 13:18:07,304 | INFO     | job 6678363689 has completed (purged errors)
[2025-06-04 14:18:27] 2025-06-04 13:18:07,304 | INFO     | overall cleanup function is called
[2025-06-04 14:18:27] 2025-06-04 13:18:08,313 | INFO     | --- collectZombieJob: --- 10, [3661865]
[2025-06-04 14:18:27] 2025-06-04 13:18:08,313 | INFO     | zombie collector waiting for pid 3661865
[2025-06-04 14:18:27] 2025-06-04 13:18:08,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:18:27] 2025-06-04 13:18:08,313 | INFO     | collected zombie processes
[2025-06-04 14:18:27] 2025-06-04 13:18:08,313 | INFO     | will attempt to kill all subprocesses of pid=3661865
[2025-06-04 14:18:27] 2025-06-04 13:18:08,622 | INFO     | process IDs to be killed: [3661865] (in reverse order)
[2025-06-04 14:18:27] 2025-06-04 13:18:08,736 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:18:27] 2025-06-04 13:18:08,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:18:27] 2025-06-04 13:18:08,745 | INFO     | did not find any defunct processes belonging to 3661865
[2025-06-04 14:18:27] 2025-06-04 13:18:08,753 | INFO     | did not find any defunct processes belonging to 3661865
[2025-06-04 14:18:27] 2025-06-04 13:18:08,753 | INFO     | ready for new job
[2025-06-04 14:18:27] 2025-06-04 13:18:08,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:18:27] 2025-06-04 13:18:08,755 | INFO     | **************************************
[2025-06-04 14:18:27] 2025-06-04 13:18:08,755 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:18:27] 2025-06-04 13:18:08,755 | INFO     | **************************************
[2025-06-04 14:18:27] 2025-06-04 13:18:08,755 | INFO     | 
[2025-06-04 14:18:27] 2025-06-04 13:18:08,758 | INFO     | pilot is running in a VM
[2025-06-04 14:18:27] 2025-06-04 13:18:08,758 | INFO     | architecture information:
[2025-06-04 14:18:27] 2025-06-04 13:18:08,759 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:18:27] 2025-06-04 13:18:08,776 | INFO     | cat /etc/os-release:
[2025-06-04 14:18:27] NAME="CentOS Linux"
[2025-06-04 14:18:27] VERSION="7 (Core)"
[2025-06-04 14:18:27] ID="centos"
[2025-06-04 14:18:27] ID_LIKE="rhel fedora"
[2025-06-04 14:18:27] VERSION_ID="7"
[2025-06-04 14:18:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:18:27] ANSI_COLOR="0;31"
[2025-06-04 14:18:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:18:27] HOME_URL="https://www.centos.org/"
[2025-06-04 14:18:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:18:27] 
[2025-06-04 14:18:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:18:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:18:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:18:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:18:27] 
[2025-06-04 14:18:27] 2025-06-04 13:18:08,776 | INFO     | **************************************
[2025-06-04 14:18:27] 2025-06-04 13:18:09,279 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-06-04 14:18:27] 2025-06-04 13:18:09,302 | INFO     | sufficient remaining disk space (112250060800 B)
[2025-06-04 14:18:27] 2025-06-04 13:18:09,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:18:27] 2025-06-04 13:18:09,303 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:18:27] 2025-06-04 13:18:09,303 | INFO     | update_server=False
[2025-06-04 14:18:27] 2025-06-04 13:18:09,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:18:27] 2025-06-04 13:18:09,303 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:18:27] 2025-06-04 13:18:09,304 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:18:27] 2025-06-04 13:18:09,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:18:27] 2025-06-04 13:18:09,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:18:27] 2025-06-04 13:18:09,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:18:27] 2025-06-04 13:18:09,387 | INFO     | aborting loop
[2025-06-04 14:18:27] 2025-06-04 13:18:09,461 | INFO     | all job control threads have been joined
[2025-06-04 14:18:27] 2025-06-04 13:18:09,657 | INFO     | all payload control threads have been joined
[2025-06-04 14:18:27] 2025-06-04 13:18:10,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:18:27] 2025-06-04 13:18:10,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:18:27] 2025-06-04 13:18:10,312 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:10,363 | INFO     | all data control threads have been joined
[2025-06-04 14:18:27] 2025-06-04 13:18:10,376 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:10,395 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:10,466 | INFO     | [job] control thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:10,662 | INFO     | [payload] control thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:10,908 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:11,294 | INFO     | [job] validate thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:11,355 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:11,368 | INFO     | [data] control thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:11,536 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:11,634 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:11,657 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:11,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:18:27] 2025-06-04 13:18:12,197 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:12,855 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:14,289 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:19,779 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:18:27] 2025-06-04 13:18:20,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:18:27] 2025-06-04 13:18:22,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124617271658304)>', '<ExcThread(monitor, started 124616951437056)>']
[2025-06-04 14:18:27] 2025-06-04 13:18:22,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:18:27] 2025-06-04 13:18:22,367 | INFO     | [monitor] control thread has ended
[2025-06-04 14:18:27] 2025-06-04 13:18:27,266 | INFO     | all workflow threads have been joined
[2025-06-04 14:18:27] 2025-06-04 13:18:27,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:18:27] 2025-06-04 13:18:27,266 | INFO     | traces error code: 0
[2025-06-04 14:18:27] 2025-06-04 13:18:27,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:18:27] 2025-06-04 13:18:27,431 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:18:27] 2025-06-04 13:18:27,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:18:27] 2025-06-04 13:18:27,437 [wrapper] pilotpid: 3654956
[2025-06-04 14:18:27] 2025-06-04 13:18:27,440 [wrapper] Pilot exit status: 0
[2025-06-04 14:18:27] 2025-06-04 13:18:27,454 [wrapper] pandaids: 6678363689
[2025-06-04 14:18:27] 2025-06-04 13:18:27,540 [wrapper] cleanup supervisor_pilot 4023057 3654957
[2025-06-04 14:18:27] 2025-06-04 13:18:27,546 [wrapper] Test setup, not cleaning
[2025-06-04 14:18:27] 2025-06-04 13:18:27,549 [wrapper] apfmon messages muted
[2025-06-04 14:18:27] 2025-06-04 13:18:27,552 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:18:27] 2025-06-04 13:18:27,555 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:18:27]  *** Error codes and diagnostics ***
[2025-06-04 14:18:27]     "exeErrorCode": 0,
[2025-06-04 14:18:27]     "exeErrorDiag": "",
[2025-06-04 14:18:27]     "pilotErrorCode": 0,
[2025-06-04 14:18:27]     "pilotErrorDiag": "",
[2025-06-04 14:18:27]  *** Listing of results directory ***
[2025-06-04 14:18:27] total 390028
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:58 pilot3.tar.gz
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:31 queuedata.json
[2025-06-04 14:18:27] -rwx------ 1 boinc boinc     37140 Jun  4 06:31 runpilot2-wrapper.sh
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:18:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:26 run_atlas
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:26 job.xml
[2025-06-04 14:18:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:26 start_atlas.sh
[2025-06-04 14:18:27] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:26 shared
[2025-06-04 14:18:27] -rw-r--r-- 2 boinc boinc    508886 Jun  4 12:26 input.tar.gz
[2025-06-04 14:18:27] -rw-r--r-- 2 boinc boinc 214750948 Jun  4 12:26 EVNT.45006593._002144.pool.root.1
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:26 boinc_lockfile
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:26 pandaJob.out
[2025-06-04 14:18:27] -rw------- 1 boinc boinc    986812 Jun  4 12:26 agis_schedconf.cvmfs.json
[2025-06-04 14:18:27] -rw------- 1 boinc boinc   1603667 Jun  4 12:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:18:27] drwx------ 4 boinc boinc      4096 Jun  4 12:26 pilot3
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc      6669 Jun  4 13:25 init_data.xml
[2025-06-04 14:18:27] -rw------- 1 boinc boinc 179010779 Jun  4 14:17 HITS.45006595._053564.pool.root.1
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc       529 Jun  4 14:17 boinc_task_state.xml
[2025-06-04 14:18:27] -rw------- 1 boinc boinc        95 Jun  4 14:17 pilot_heartbeat.json
[2025-06-04 14:18:27] -rw------- 1 boinc boinc      1031 Jun  4 14:17 memory_monitor_summary.json
[2025-06-04 14:18:27] -rw------- 1 boinc boinc    255399 Jun  4 14:17 log.45006595._053564.job.log.tgz.1
[2025-06-04 14:18:27] -rw------- 1 boinc boinc      7688 Jun  4 14:18 heartbeat.json
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:18 boinc_mmap_file
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc        27 Jun  4 14:18 wrapper_checkpoint.txt
[2025-06-04 14:18:27] -rw------- 1 boinc boinc      4618 Jun  4 14:18 pilotlog.txt
[2025-06-04 14:18:27] -rw------- 1 boinc boinc    641141 Jun  4 14:18 log.45006595._053564.job.log.1
[2025-06-04 14:18:27] -rw------- 1 boinc boinc       357 Jun  4 14:18 output.list
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:18 runtime_log
[2025-06-04 14:18:27] -rw------- 1 boinc boinc    911360 Jun  4 14:18 result.tar.gz
[2025-06-04 14:18:27] -rw------- 1 boinc boinc       649 Jun  4 14:18 XnyNDmmtvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNQnKDmzm5q2n.diag
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc      8748 Jun  4 14:18 runtime_log.err
[2025-06-04 14:18:27] -rw-r--r-- 1 boinc boinc     20754 Jun  4 14:18 stderr.txt
[2025-06-04 14:18:27] HITS file was successfully produced:
[2025-06-04 14:18:27] -rw------- 1 boinc boinc 179010779 Jun  4 14:17 shared/HITS.pool.root.1
[2025-06-04 14:18:27]  *** Contents of shared directory: ***
[2025-06-04 14:18:27] total 385952
[2025-06-04 14:18:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:26 start_atlas.sh
[2025-06-04 14:18:27] -rw-r--r-- 2 boinc boinc    508886 Jun  4 12:26 input.tar.gz
[2025-06-04 14:18:27] -rw-r--r-- 2 boinc boinc 214750948 Jun  4 12:26 ATLAS.root_0
[2025-06-04 14:18:27] -rw------- 1 boinc boinc 179010779 Jun  4 14:17 HITS.pool.root.1
[2025-06-04 14:18:27] -rw------- 1 boinc boinc    911360 Jun  4 14:18 result.tar.gz
14:18:28 (3651088): run_atlas exited; CPU time 25755.608760
14:18:28 (3651088): called boinc_finish(0)

</stderr_txt>
]]>

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