Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
19:03:18 (448152): wrapper (7.7.26015): starting
19:03:18 (448152): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 19:03:18] Arguments: --nthreads 12
[2025-06-04 19:03:18] Threads: 12
[2025-06-04 19:03:18] Checking for CVMFS
[2025-06-04 19:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:03:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:03:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:03:18] 2.13.0.0 3386825 3177 48612 146798 0 56 3739407 6144001 0 130560 0 1774638 99.993 441468 2654 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 19:03:18] CVMFS is ok
[2025-06-04 19:03:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:03:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 19:03:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 19:03:18] Further information can be found at the LHC@home message board.
[2025-06-04 19:03:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:03:18] Checking for apptainer binary...
[2025-06-04 19:03:18] apptainer is not installed, using version from CVMFS
[2025-06-04 19:03:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:03:18] ace
[2025-06-04 19:03:18] apptainer works
[2025-06-04 19:03:18] Set ATHENA_PROC_NUMBER=12
[2025-06-04 19:03:18] Set ATHENA_CORE_NUMBER=12
[2025-06-04 19:03:18] Starting ATLAS job with PandaID=6678247769
[2025-06-04 19:03:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:07:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:07:41]  domain=
[2025-06-04 20:07:41]  filesize=373453
[2025-06-04 20:07:41]  filetype=log
[2025-06-04 20:07:41]  guid=83989095-f22c-411a-a8be-4e1946919e70
[2025-06-04 20:07:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 20:07:41]  is_altstaged=None
[2025-06-04 20:07:41]  is_tar=False
[2025-06-04 20:07:41]  lfn=log.45006595._050446.job.log.tgz.1
[2025-06-04 20:07:41]  mtime=0
[2025-06-04 20:07:41]  protocol_id=None
[2025-06-04 20:07:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 20:07:41]  replicas=None
[2025-06-04 20:07:41]  scope=mc23_13p6TeV
[2025-06-04 20:07:41]  status=None
[2025-06-04 20:07:41]  status_code=0
[2025-06-04 20:07:41]  storage_token=
[2025-06-04 20:07:41]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678247769/log.45006595._050446.job.log.tgz.1
[2025-06-04 20:07:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/d8/log.45006595._050446.job.log.tgz.1
[2025-06-04 20:07:41]  workdir=None
[2025-06-04 20:07:41] ]
[2025-06-04 20:07:41] 2025-06-05 01:07:25,057 | INFO     | transferring file log.45006595._050446.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678247769/log.45006595._050446.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 20:07:41] 2025-06-05 01:07:25,057 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678247769/log.45006595._050446.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-04 20:07:41] 2025-06-05 01:07:25,070 | INFO     | adding to output.list: log.45006595._050446.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/d8/log.45006595._050446.job.log.tg
[2025-06-04 20:07:41] 2025-06-05 01:07:25,071 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 20:07:41] 2025-06-05 01:07:25,071 | INFO     | summary of transferred files:
[2025-06-04 20:07:41] 2025-06-05 01:07:25,071 | INFO     |  -- lfn=log.45006595._050446.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 20:07:41] 2025-06-05 01:07:25,071 | INFO     | stage-out finished correctly
[2025-06-04 20:07:41] 2025-06-05 01:07:25,115 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 20:07:41] 2025-06-05 01:07:25,153 | INFO     | monitor loop #288: job 0:6678247769 is in state 'finished'
[2025-06-04 20:07:41] 2025-06-05 01:07:25,161 | INFO     | job 6678247769 has state=finished
[2025-06-04 20:07:41] 2025-06-05 01:07:25,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:07:41] 2025-06-05 01:07:25,162 | INFO     | preparing for final server update for job 6678247769 in state='finished'
[2025-06-04 20:07:41] 2025-06-05 01:07:25,162 | INFO     | this job has now completed (state=finished)
[2025-06-04 20:07:41] 2025-06-05 01:07:25,163 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 20:07:41] 2025-06-05 01:07:25,163 | INFO     | log transfer has been attempted: DONE
[2025-06-04 20:07:41] 2025-06-05 01:07:25,163 | INFO     | job 6678247769 has finished - writing final server update
[2025-06-04 20:07:41] 2025-06-05 01:07:25,163 | INFO     | total number of processed events: 400 (read)
[2025-06-04 20:07:41] 2025-06-05 01:07:25,164 | INFO     | executing command: lscpu
[2025-06-04 20:07:41] 2025-06-05 01:07:25,183 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:07:41] 2025-06-05 01:07:27,665 | INFO     | monitor loop #289: job 0:6678247769 is in state 'finished'
[2025-06-04 20:07:41] 2025-06-05 01:07:27,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:07:41] 2025-06-05 01:07:27,840 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:07:41] 2025-06-05 01:07:27,841 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678247769/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:07:41] 2025-06-05 01:07:27,841 | INFO     | extracted standard info from prmon json
[2025-06-04 20:07:41] 2025-06-05 01:07:27,842 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:07:41] 2025-06-05 01:07:27,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:07:41] 2025-06-05 01:07:27,842 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:07:41] 2025-06-05 01:07:27,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:07:41] 2025-06-05 01:07:27,843 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:07:41] 2025-06-05 01:07:27,843 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | sum of deviations: -3367025753.5
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | mean x: 1749083809.5
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | mean y: 2761587.4464285714
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | -- intersect: 108184277254.21935
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | intersect: 108184277254.21935
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | chi2: 0.0695543825444197
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | -- intersect: 108184277254.21935
[2025-06-04 20:07:41] 2025-06-05 01:07:27,844 | INFO     | current memory leak: -61.85 B/s (using 56 data points, chi2=0.07)
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | ..............................
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . Timing measurements:
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . get job = 0 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . initial setup = 3 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . payload setup = 3 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . stage-in = 0 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . payload execution = 3817 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . stage-out = 0 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | . log creation = 0 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,845 | INFO     | ..............................
[2025-06-04 20:07:41] 2025-06-05 01:07:27,907 | INFO     | 
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | job summary report
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | --------------------------------------------------
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | PanDA job id: 6678247769
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | task id: 45006595
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | errors: (none)
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | pilot state: finished 
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | transexitcode: 0
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | exeerrorcode: 0
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | exeerrordiag: 
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | exitcode: 0
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | exitmsg: OK
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | cpuconsumptiontime: 41429 s
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | nevents: 400
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | neventsw: 0
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | pid: 458349
[2025-06-04 20:07:41] 2025-06-05 01:07:27,908 | INFO     | pgrp: 458349
[2025-06-04 20:07:41] 2025-06-05 01:07:27,909 | INFO     | corecount: 12
[2025-06-04 20:07:41] 2025-06-05 01:07:27,909 | INFO     | event service: False
[2025-06-04 20:07:41] 2025-06-05 01:07:27,909 | INFO     | sizes: {0: 2397349, 3: 2397555, 11: 2397583, 3824: 2423367, 3825: 2432378, 3828: 2432492}
[2025-06-04 20:07:41] 2025-06-05 01:07:27,909 | INFO     | --------------------------------------------------
[2025-06-04 20:07:41] 2025-06-05 01:07:27,909 | INFO     | 
[2025-06-04 20:07:41] 2025-06-05 01:07:27,909 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 20:07:41] 2025-06-05 01:07:27,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | job 6678247769 has completed (purged errors)
[2025-06-04 20:07:41] 2025-06-05 01:07:27,938 | INFO     | overall cleanup function is called
[2025-06-04 20:07:41] 2025-06-05 01:07:28,945 | INFO     | --- collectZombieJob: --- 10, [458349]
[2025-06-04 20:07:41] 2025-06-05 01:07:28,945 | INFO     | zombie collector waiting for pid 458349
[2025-06-04 20:07:41] 2025-06-05 01:07:28,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:07:41] 2025-06-05 01:07:28,945 | INFO     | collected zombie processes
[2025-06-04 20:07:41] 2025-06-05 01:07:28,945 | INFO     | will attempt to kill all subprocesses of pid=458349
[2025-06-04 20:07:41] 2025-06-05 01:07:29,017 | INFO     | process IDs to be killed: [458349] (in reverse order)
[2025-06-04 20:07:41] 2025-06-05 01:07:29,047 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:07:41] 2025-06-05 01:07:29,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:07:41] 2025-06-05 01:07:29,049 | INFO     | did not find any defunct processes belonging to 458349
[2025-06-04 20:07:41] 2025-06-05 01:07:29,051 | INFO     | did not find any defunct processes belonging to 458349
[2025-06-04 20:07:41] 2025-06-05 01:07:29,051 | INFO     | ready for new job
[2025-06-04 20:07:41] 2025-06-05 01:07:29,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:07:41] 2025-06-05 01:07:29,053 | INFO     | **************************************
[2025-06-04 20:07:41] 2025-06-05 01:07:29,053 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:07:41] 2025-06-05 01:07:29,053 | INFO     | **************************************
[2025-06-04 20:07:41] 2025-06-05 01:07:29,053 | INFO     | 
[2025-06-04 20:07:41] 2025-06-05 01:07:29,054 | INFO     | architecture information:
[2025-06-04 20:07:41] 2025-06-05 01:07:29,054 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:07:41] 2025-06-05 01:07:29,063 | INFO     | cat /etc/os-release:
[2025-06-04 20:07:41] NAME="CentOS Linux"
[2025-06-04 20:07:41] VERSION="7 (Core)"
[2025-06-04 20:07:41] ID="centos"
[2025-06-04 20:07:41] ID_LIKE="rhel fedora"
[2025-06-04 20:07:41] VERSION_ID="7"
[2025-06-04 20:07:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:07:41] ANSI_COLOR="0;31"
[2025-06-04 20:07:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:07:41] HOME_URL="https://www.centos.org/"
[2025-06-04 20:07:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:07:41] 
[2025-06-04 20:07:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:07:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:07:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:07:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:07:41] 
[2025-06-04 20:07:41] 2025-06-05 01:07:29,063 | INFO     | **************************************
[2025-06-04 20:07:41] 2025-06-05 01:07:29,566 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 20:07:41] 2025-06-05 01:07:29,578 | INFO     | sufficient remaining disk space (24731713536 B)
[2025-06-04 20:07:41] 2025-06-05 01:07:29,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:07:41] 2025-06-05 01:07:29,578 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:07:41] 2025-06-05 01:07:29,578 | INFO     | update_server=False
[2025-06-04 20:07:41] 2025-06-05 01:07:29,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:07:41] 2025-06-05 01:07:29,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:07:41] 2025-06-05 01:07:29,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:07:41] 2025-06-05 01:07:29,579 | INFO     | aborting loop
[2025-06-04 20:07:41] 2025-06-05 01:07:29,842 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:07:41] 2025-06-05 01:07:29,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:07:41] 2025-06-05 01:07:29,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:07:41] 2025-06-05 01:07:29,947 | INFO     | all payload control threads have been joined
[2025-06-04 20:07:41] 2025-06-05 01:07:30,255 | INFO     | all job control threads have been joined
[2025-06-04 20:07:41] 2025-06-05 01:07:30,581 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:30,583 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:30,584 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:30,588 | INFO     | all data control threads have been joined
[2025-06-04 20:07:41] 2025-06-05 01:07:30,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:07:41] 2025-06-05 01:07:30,870 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:30,941 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:30,952 | INFO     | [payload] control thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:07:41] 2025-06-05 01:07:31,195 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,260 | INFO     | [job] control thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,449 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,495 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,507 | INFO     | [job] validate thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,593 | INFO     | [data] control thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:31,961 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:32,626 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:35,173 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:07:41] 2025-06-05 01:07:36,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844923844416)>', '<ExcThread(monitor, started 139844353234688)>']
[2025-06-04 20:07:41] 2025-06-05 01:07:36,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:07:41] 2025-06-05 01:07:36,873 | INFO     | [monitor] control thread has ended
[2025-06-04 20:07:41] 2025-06-05 01:07:41,320 | INFO     | all workflow threads have been joined
[2025-06-04 20:07:41] 2025-06-05 01:07:41,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:07:41] 2025-06-05 01:07:41,320 | INFO     | traces error code: 0
[2025-06-04 20:07:41] 2025-06-05 01:07:41,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:07:41] 2025-06-05 01:07:41,403 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:07:41] 2025-06-05 01:07:41,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:07:41] 2025-06-05 01:07:41,406 [wrapper] pilotpid: 451838
[2025-06-04 20:07:41] 2025-06-05 01:07:41,407 [wrapper] Pilot exit status: 0
[2025-06-04 20:07:41] 2025-06-05 01:07:41,414 [wrapper] pandaids: 6678247769
[2025-06-04 20:07:41] 2025-06-05 01:07:41,432 [wrapper] cleanup supervisor_pilot  469523 451839
[2025-06-04 20:07:41] 2025-06-05 01:07:41,434 [wrapper] Test setup, not cleaning
[2025-06-04 20:07:41] 2025-06-05 01:07:41,435 [wrapper] apfmon messages muted
[2025-06-04 20:07:41] 2025-06-05 01:07:41,437 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:07:41] 2025-06-05 01:07:41,439 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:07:41]  *** Error codes and diagnostics ***
[2025-06-04 20:07:41]     "exeErrorCode": 0,
[2025-06-04 20:07:41]     "exeErrorDiag": "",
[2025-06-04 20:07:41]     "pilotErrorCode": 0,
[2025-06-04 20:07:41]     "pilotErrorDiag": "",
[2025-06-04 20:07:41]  *** Listing of results directory ***
[2025-06-04 20:07:41] total 388628
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:59 pilot3.tar.gz
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:11 queuedata.json
[2025-06-04 20:07:41] -rwx------ 1 boinc boinc     37140 Jun  3 21:12 runpilot2-wrapper.sh
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:07:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 19:03 run_atlas
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 19:03 job.xml
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc      6748 Jun  4 19:03 init_data.xml
[2025-06-04 20:07:41] -rw-r--r-- 2 boinc boinc 215110687 Jun  4 19:03 EVNT.45006593._002022.pool.root.1
[2025-06-04 20:07:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 19:03 start_atlas.sh
[2025-06-04 20:07:41] drwxrwx--x 2 boinc boinc      4096 Jun  4 19:03 shared
[2025-06-04 20:07:41] -rw-r--r-- 2 boinc boinc    508880 Jun  4 19:03 input.tar.gz
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 19:03 boinc_lockfile
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc      2525 Jun  4 19:03 pandaJob.out
[2025-06-04 20:07:41] -rw------- 1 boinc boinc    987117 Jun  4 19:03 agis_schedconf.cvmfs.json
[2025-06-04 20:07:41] -rw------- 1 boinc boinc   1598969 Jun  4 19:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:07:41] drwx------ 4 boinc boinc      4096 Jun  4 19:03 pilot3
[2025-06-04 20:07:41] -rw------- 1 boinc boinc 177495368 Jun  4 20:07 HITS.45006595._050446.pool.root.1
[2025-06-04 20:07:41] -rw------- 1 boinc boinc        95 Jun  4 20:07 pilot_heartbeat.json
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc       529 Jun  4 20:07 boinc_task_state.xml
[2025-06-04 20:07:41] -rw------- 1 boinc boinc      1031 Jun  4 20:07 memory_monitor_summary.json
[2025-06-04 20:07:41] -rw------- 1 boinc boinc    373453 Jun  4 20:07 log.45006595._050446.job.log.tgz.1
[2025-06-04 20:07:41] -rw------- 1 boinc boinc      7675 Jun  4 20:07 heartbeat.json
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 20:07 boinc_mmap_file
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc        27 Jun  4 20:07 wrapper_checkpoint.txt
[2025-06-04 20:07:41] -rw------- 1 boinc boinc      4360 Jun  4 20:07 pilotlog.txt
[2025-06-04 20:07:41] -rw------- 1 boinc boinc    381143 Jun  4 20:07 log.45006595._050446.job.log.1
[2025-06-04 20:07:41] -rw------- 1 boinc boinc       357 Jun  4 20:07 output.list
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 20:07 runtime_log
[2025-06-04 20:07:41] -rw------- 1 boinc boinc    778240 Jun  4 20:07 result.tar.gz
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc      8696 Jun  4 20:07 runtime_log.err
[2025-06-04 20:07:41] -rw------- 1 boinc boinc       640 Jun  4 20:07 iZgNDmTnsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhpmKDmD3VEIo.diag
[2025-06-04 20:07:41] -rw-r--r-- 1 boinc boinc     21107 Jun  4 20:07 stderr.txt
[2025-06-04 20:07:41] HITS file was successfully produced:
[2025-06-04 20:07:41] -rw------- 1 boinc boinc 177495368 Jun  4 20:07 shared/HITS.pool.root.1
[2025-06-04 20:07:41]  *** Contents of shared directory: ***
[2025-06-04 20:07:41] total 384692
[2025-06-04 20:07:41] -rw-r--r-- 2 boinc boinc 215110687 Jun  4 19:03 ATLAS.root_0
[2025-06-04 20:07:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 19:03 start_atlas.sh
[2025-06-04 20:07:41] -rw-r--r-- 2 boinc boinc    508880 Jun  4 19:03 input.tar.gz
[2025-06-04 20:07:41] -rw------- 1 boinc boinc 177495368 Jun  4 20:07 HITS.pool.root.1
[2025-06-04 20:07:41] -rw------- 1 boinc boinc    778240 Jun  4 20:07 result.tar.gz
20:07:43 (448152): run_atlas exited; CPU time 41470.582394
20:07:43 (448152): called boinc_finish(0)

</stderr_txt>
]]>

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