Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:11 (1196855): wrapper (7.7.26015): starting
06:40:11 (1196855): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:40:11] Arguments: --nthreads 12
[2025-06-04 06:40:11] Threads: 12
[2025-06-04 06:40:11] Checking for CVMFS
[2025-06-04 06:40:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:40:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:40:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:40:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:40:11] 2.12.6.0 706982 38894 292708 146777 3 101 18760438 25181185 18283 16776704 3 198174810 99.565 225226446 24709 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:40:11] CVMFS is ok
[2025-06-04 06:40:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:40:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:40:11] Further information can be found at the LHC@home message board.
[2025-06-04 06:40:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:40:11] Checking for apptainer binary...
[2025-06-04 06:40:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:40:11] Running /usr/bin/apptainer --version
[2025-06-04 06:40:11] apptainer version 1.4.1-1.el9
[2025-06-04 06:40:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:40:12] c-16-34.aglt2.org
[2025-06-04 06:40:12] apptainer works
[2025-06-04 06:40:12] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:40:12] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:40:12] Starting ATLAS job with PandaID=6678246291
[2025-06-04 06:40:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:51:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:51:39] 2025-06-04 12:51:23,424 | INFO     | sum of deviations: 24646067107.093014
[2025-06-04 08:51:39] 2025-06-04 12:51:23,424 | INFO     | mean x: 1749037559.2558138
[2025-06-04 08:51:39] 2025-06-04 12:51:23,425 | INFO     | mean y: 2290423.8759689922
[2025-06-04 08:51:39] 2025-06-04 12:51:23,428 | INFO     | -- intersect: -64757766168.40888
[2025-06-04 08:51:39] 2025-06-04 12:51:23,429 | INFO     | intersect: -64757766168.40888
[2025-06-04 08:51:39] 2025-06-04 12:51:23,429 | INFO     | chi2: 4.129831786060918
[2025-06-04 08:51:39] 2025-06-04 12:51:23,429 | INFO     | sum of square deviations: 591211660.2177436
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | sum of deviations: 31538748401.6613
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | mean x: 1749037406.766129
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | mean y: 2304042.919354839
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | -- intersect: -93301760184.72919
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | intersect: -93301760184.72919
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | chi2: 3.4778367882303938
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | current chi2=3.4778367882303938 (change=15.787446840598914 %)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,430 | INFO     | right removable region: 123
[2025-06-04 08:51:39] 2025-06-04 12:51:23,431 | INFO     | sum of square deviations: 591191530.2177436
[2025-06-04 08:51:39] 2025-06-04 12:51:23,431 | INFO     | sum of deviations: -3306192380.6451592
[2025-06-04 08:51:39] 2025-06-04 12:51:23,431 | INFO     | mean x: 1749037711.766129
[2025-06-04 08:51:39] 2025-06-04 12:51:23,431 | INFO     | mean y: 2347370.3225806453
[2025-06-04 08:51:39] 2025-06-04 12:51:23,431 | INFO     | -- intersect: 9783703936.734133
[2025-06-04 08:51:39] 2025-06-04 12:51:23,431 | INFO     | intersect: 9783703936.734133
[2025-06-04 08:51:39] 2025-06-04 12:51:23,431 | INFO     | chi2: 1.7578478040952858
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | current chi2=1.7578478040952858 (change=57.4353655267896 %)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | sum of square deviations: 522510409.8487405
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | sum of deviations: -19734433482.478996
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | mean x: 1749037864.2773108
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | mean y: 2383735.3781512603
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | -- intersect: 66060917192.94064
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | intersect: 66060917192.94064
[2025-06-04 08:51:39] 2025-06-04 12:51:23,432 | INFO     | chi2: 0.9288923316074296
[2025-06-04 08:51:39] 2025-06-04 12:51:23,433 | INFO     | current chi2=0.9288923316074296 (change=47.157408653731316 %)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,433 | INFO     | sum of square deviations: 459364276.94736904
[2025-06-04 08:51:39] 2025-06-04 12:51:23,433 | INFO     | sum of deviations: -19530184454.68422
[2025-06-04 08:51:39] 2025-06-04 12:51:23,434 | INFO     | mean x: 1749038016.7894738
[2025-06-04 08:51:39] 2025-06-04 12:51:23,434 | INFO     | mean y: 2383027.9298245613
[2025-06-04 08:51:39] 2025-06-04 12:51:23,434 | INFO     | -- intersect: 74363923096.19948
[2025-06-04 08:51:39] 2025-06-04 12:51:23,434 | INFO     | intersect: 74363923096.19948
[2025-06-04 08:51:39] 2025-06-04 12:51:23,434 | INFO     | chi2: 0.8837169557095884
[2025-06-04 08:51:39] 2025-06-04 12:51:23,434 | INFO     | current chi2=0.8837169557095884 (change=4.863359763091818 %)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,435 | INFO     | left removable region: 30
[2025-06-04 08:51:39] 2025-06-04 12:51:23,435 | INFO     | sum of square deviations: 249388274.3225805
[2025-06-04 08:51:39] 2025-06-04 12:51:23,435 | INFO     | sum of deviations: 454286732.6774196
[2025-06-04 08:51:39] 2025-06-04 12:51:23,435 | INFO     | mean x: 1749038291.3225806
[2025-06-04 08:51:39] 2025-06-04 12:51:23,436 | INFO     | mean y: 2364835.010752688
[2025-06-04 08:51:39] 2025-06-04 12:51:23,436 | INFO     | -- intersect: -3183690695.6709847
[2025-06-04 08:51:39] 2025-06-04 12:51:23,436 | INFO     | intersect: -3183690695.6709847
[2025-06-04 08:51:39] 2025-06-04 12:51:23,437 | INFO     | chi2: 0.017168242292111183
[2025-06-04 08:51:39] 2025-06-04 12:51:23,437 | INFO     | -- intersect: -3183690695.6709847
[2025-06-04 08:51:39] 2025-06-04 12:51:23,437 | INFO     | current memory leak: 1.82 B/s (using 93 data points, chi2=0.02)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,438 | INFO     | ..............................
[2025-06-04 08:51:39] 2025-06-04 12:51:23,438 | INFO     | . Timing measurements:
[2025-06-04 08:51:39] 2025-06-04 12:51:23,438 | INFO     | . get job = 0 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,438 | INFO     | . initial setup = 3 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,438 | INFO     | . payload setup = 8 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,439 | INFO     | . stage-in = 0 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,439 | INFO     | sufficient remaining disk space (64579698688 B)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,439 | INFO     | . payload execution = 7823 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,439 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,439 | INFO     | . stage-out = 0 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,440 | INFO     | . log creation = 0 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,440 | INFO     | ..............................
[2025-06-04 08:51:39] 2025-06-04 12:51:23,462 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678246291: 4079527 B (within 2537553920 B limit)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,462 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678246291/HITS.45006595._049998.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,462 | INFO     | total size of present files: 0 B (workdir size: 4079527 B)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,462 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678246291/HITS.45006595._049998.pool.root.1 since it does not exist
[2025-06-04 08:51:39] 2025-06-04 12:51:23,553 | INFO     | 
[2025-06-04 08:51:39] 2025-06-04 12:51:23,553 | INFO     | job summary report
[2025-06-04 08:51:39] 2025-06-04 12:51:23,553 | INFO     | --------------------------------------------------
[2025-06-04 08:51:39] 2025-06-04 12:51:23,553 | INFO     | PanDA job id: 6678246291
[2025-06-04 08:51:39] 2025-06-04 12:51:23,553 | INFO     | task id: 45006595
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | errors: (none)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | pilot state: finished 
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | transexitcode: 0
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | exeerrorcode: 0
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | exeerrordiag: 
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | exitcode: 0
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | exitmsg: OK
[2025-06-04 08:51:39] 2025-06-04 12:51:23,554 | INFO     | cpuconsumptiontime: 47436 s
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | nevents: 400
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | neventsw: 0
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | pid: 1206989
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | pgrp: 1206989
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | corecount: 12
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | event service: False
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | sizes: {0: 2405010, 1: 2405209, 5: 2405415, 11: 2405471, 7836: 2441883, 7842: 2442025}
[2025-06-04 08:51:39] 2025-06-04 12:51:23,555 | INFO     | --------------------------------------------------
[2025-06-04 08:51:39] 2025-06-04 12:51:23,556 | INFO     | 
[2025-06-04 08:51:39] 2025-06-04 12:51:23,556 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:51:39] 2025-06-04 12:51:23,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:51:39] 2025-06-04 12:51:23,587 | INFO     | job 6678246291 has completed (purged errors)
[2025-06-04 08:51:39] 2025-06-04 12:51:23,587 | INFO     | overall cleanup function is called
[2025-06-04 08:51:39] 2025-06-04 12:51:24,038 | INFO     | number of running child processes to parent process 1206989: 1
[2025-06-04 08:51:39] 2025-06-04 12:51:24,038 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:51:39] 2025-06-04 12:51:24,038 | INFO     | aborting job monitoring since job object (job id=6678246291) has expired
[2025-06-04 08:51:39] 2025-06-04 12:51:24,596 | INFO     | --- collectZombieJob: --- 10, [1206989]
[2025-06-04 08:51:39] 2025-06-04 12:51:24,597 | INFO     | zombie collector waiting for pid 1206989
[2025-06-04 08:51:39] 2025-06-04 12:51:24,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:51:39] 2025-06-04 12:51:24,597 | INFO     | collected zombie processes
[2025-06-04 08:51:39] 2025-06-04 12:51:24,597 | INFO     | will attempt to kill all subprocesses of pid=1206989
[2025-06-04 08:51:39] 2025-06-04 12:51:25,070 | INFO     | process IDs to be killed: [1206989] (in reverse order)
[2025-06-04 08:51:39] 2025-06-04 12:51:25,193 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:51:39] 2025-06-04 12:51:25,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:51:39] 2025-06-04 12:51:25,209 | INFO     | did not find any defunct processes belonging to 1206989
[2025-06-04 08:51:39] 2025-06-04 12:51:25,225 | INFO     | did not find any defunct processes belonging to 1206989
[2025-06-04 08:51:39] 2025-06-04 12:51:25,226 | INFO     | ready for new job
[2025-06-04 08:51:39] 2025-06-04 12:51:25,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:51:39] 2025-06-04 12:51:25,228 | INFO     | **************************************
[2025-06-04 08:51:39] 2025-06-04 12:51:25,228 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:51:39] 2025-06-04 12:51:25,228 | INFO     | **************************************
[2025-06-04 08:51:39] 2025-06-04 12:51:25,228 | INFO     | 
[2025-06-04 08:51:39] 2025-06-04 12:51:25,243 | INFO     | architecture information:
[2025-06-04 08:51:39] 2025-06-04 12:51:25,243 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:51:39] 2025-06-04 12:51:25,257 | INFO     | cat /etc/os-release:
[2025-06-04 08:51:39] NAME="CentOS Linux"
[2025-06-04 08:51:39] VERSION="7 (Core)"
[2025-06-04 08:51:39] ID="centos"
[2025-06-04 08:51:39] ID_LIKE="rhel fedora"
[2025-06-04 08:51:39] VERSION_ID="7"
[2025-06-04 08:51:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:51:39] ANSI_COLOR="0;31"
[2025-06-04 08:51:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:51:39] HOME_URL="https://www.centos.org/"
[2025-06-04 08:51:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:51:39] 
[2025-06-04 08:51:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:51:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:51:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:51:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:51:39] 
[2025-06-04 08:51:39] 2025-06-04 12:51:25,257 | INFO     | **************************************
[2025-06-04 08:51:39] 2025-06-04 12:51:25,760 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:51:39] 2025-06-04 12:51:25,778 | INFO     | sufficient remaining disk space (64583892992 B)
[2025-06-04 08:51:39] 2025-06-04 12:51:25,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:51:39] 2025-06-04 12:51:25,779 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:51:39] 2025-06-04 12:51:25,779 | INFO     | update_server=False
[2025-06-04 08:51:39] 2025-06-04 12:51:25,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:51:39] 2025-06-04 12:51:25,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:51:39] 2025-06-04 12:51:25,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:51:39] 2025-06-04 12:51:25,780 | INFO     | aborting loop
[2025-06-04 08:51:39] 2025-06-04 12:51:25,914 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:51:39] 2025-06-04 12:51:25,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:51:39] 2025-06-04 12:51:25,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:51:39] 2025-06-04 12:51:26,023 | INFO     | all data control threads have been joined
[2025-06-04 08:51:39] 2025-06-04 12:51:26,537 | INFO     | all payload control threads have been joined
[2025-06-04 08:51:39] 2025-06-04 12:51:26,640 | INFO     | all job control threads have been joined
[2025-06-04 08:51:39] 2025-06-04 12:51:26,785 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:26,786 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:26,801 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:26,864 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:26,983 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,029 | INFO     | [data] control thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,189 | INFO     | [job] validate thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,460 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,543 | INFO     | [payload] control thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,572 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,645 | INFO     | [job] control thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:27,786 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:28,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:28,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:51:39] 2025-06-04 12:51:28,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:51:39] 2025-06-04 12:51:29,562 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:32,308 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:51:39] 2025-06-04 12:51:33,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967295440704)>', '<ExcThread(monitor, started 139966659155712)>']
[2025-06-04 08:51:39] 2025-06-04 12:51:33,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:51:39] 2025-06-04 12:51:33,955 | INFO     | [monitor] control thread has ended
[2025-06-04 08:51:39] 2025-06-04 12:51:38,783 | INFO     | all workflow threads have been joined
[2025-06-04 08:51:39] 2025-06-04 12:51:38,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:51:39] 2025-06-04 12:51:38,783 | INFO     | traces error code: 0
[2025-06-04 08:51:39] 2025-06-04 12:51:38,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:51:39] 2025-06-04 12:51:38,941 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:51:39] 2025-06-04 12:51:38,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:51:39] 2025-06-04 12:51:38,946 [wrapper] pilotpid: 1200454
[2025-06-04 08:51:39] 2025-06-04 12:51:38,949 [wrapper] Pilot exit status: 0
[2025-06-04 08:51:39] 2025-06-04 12:51:38,963 [wrapper] pandaids: 6678246291
[2025-06-04 08:51:39] 2025-06-04 12:51:39,054 [wrapper] cleanup supervisor_pilot 2009852 1200455
[2025-06-04 08:51:39] 2025-06-04 12:51:39,057 [wrapper] Test setup, not cleaning
[2025-06-04 08:51:39] 2025-06-04 12:51:39,060 [wrapper] apfmon messages muted
[2025-06-04 08:51:39] 2025-06-04 12:51:39,062 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:51:39] 2025-06-04 12:51:39,066 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:51:39]  *** Error codes and diagnostics ***
[2025-06-04 08:51:39]     "exeErrorCode": 0,
[2025-06-04 08:51:39]     "exeErrorDiag": "",
[2025-06-04 08:51:39]     "pilotErrorCode": 0,
[2025-06-04 08:51:39]     "pilotErrorDiag": "",
[2025-06-04 08:51:39]  *** Listing of results directory ***
[2025-06-04 08:51:39] total 390640
[2025-06-04 08:51:39] -rwx------. 1 boincer umatlas     37140 Jun  3 21:59 runpilot2-wrapper.sh
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 21:59 queuedata.json
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 21:59 pilot3.tar.gz
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:51:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:40 run_atlas
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:40 job.xml
[2025-06-04 08:51:39] -rw-r--r--. 2 boincer umatlas 217453229 Jun  4 06:40 EVNT.45006593._002005.pool.root.1
[2025-06-04 08:51:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:40 start_atlas.sh
[2025-06-04 08:51:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:40 shared
[2025-06-04 08:51:39] -rw-r--r--. 2 boincer umatlas    508869 Jun  4 06:40 input.tar.gz
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:40 boinc_lockfile
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas      2523 Jun  4 06:40 pandaJob.out
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas    986812 Jun  4 06:40 agis_schedconf.cvmfs.json
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:51:39] drwx------. 4 boincer umatlas      4096 Jun  4 06:40 pilot3
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas      6612 Jun  4 08:47 init_data.xml
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas       530 Jun  4 08:50 boinc_task_state.xml
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas 176592409 Jun  4 08:50 HITS.45006595._049998.pool.root.1
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas        95 Jun  4 08:50 pilot_heartbeat.json
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas      1041 Jun  4 08:51 memory_monitor_summary.json
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas    383280 Jun  4 08:51 log.45006595._049998.job.log.tgz.1
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas      7716 Jun  4 08:51 heartbeat.json
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:51 wrapper_checkpoint.txt
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:51 boinc_mmap_file
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas      4353 Jun  4 08:51 pilotlog.txt
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas    686538 Jun  4 08:51 log.45006595._049998.job.log.1
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas       357 Jun  4 08:51 output.list
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:51 runtime_log
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas   1085440 Jun  4 08:51 result.tar.gz
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas       653 Jun  4 08:51 V8bKDmdasg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmTaKDmmhveZn.diag
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas      8656 Jun  4 08:51 runtime_log.err
[2025-06-04 08:51:39] -rw-r--r--. 1 boincer umatlas     21217 Jun  4 08:51 stderr.txt
[2025-06-04 08:51:39] HITS file was successfully produced:
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas 176592409 Jun  4 08:50 shared/HITS.pool.root.1
[2025-06-04 08:51:39]  *** Contents of shared directory: ***
[2025-06-04 08:51:39] total 386396
[2025-06-04 08:51:39] -rw-r--r--. 2 boincer umatlas 217453229 Jun  4 06:40 ATLAS.root_0
[2025-06-04 08:51:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:40 start_atlas.sh
[2025-06-04 08:51:39] -rw-r--r--. 2 boincer umatlas    508869 Jun  4 06:40 input.tar.gz
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas 176592409 Jun  4 08:50 HITS.pool.root.1
[2025-06-04 08:51:39] -rw-------. 1 boincer umatlas   1085440 Jun  4 08:51 result.tar.gz
08:51:41 (1196855): run_atlas exited; CPU time 47783.828346
08:51:41 (1196855): called boinc_finish(0)

</stderr_txt>
]]>

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