Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:22:43 (1421207): wrapper (7.7.26015): starting
01:22:43 (1421207): wrapper: running run_atlas (--nthreads 12)
[2025-06-07 01:22:43] Arguments: --nthreads 12
[2025-06-07 01:22:43] Threads: 12
[2025-06-07 01:22:43] Checking for CVMFS
[2025-06-07 01:22:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-07 01:22:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-07 01:22:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-07 01:22:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-07 01:22:46] 2.12.7.0 19605 5325 56404 146880 0 56 2404087 4096000 912 130560 0 3643955 99.989 1264597 156 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-07 01:22:46] CVMFS is ok
[2025-06-07 01:22:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 01:22:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-07 01:22:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-07 01:22:46] Further information can be found at the LHC@home message board.
[2025-06-07 01:22:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 01:22:46] Checking for apptainer binary...
[2025-06-07 01:22:46] apptainer is not installed, using version from CVMFS
[2025-06-07 01:22:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 01:22:47] g630
[2025-06-07 01:22:47] apptainer works
[2025-06-07 01:22:47] Set ATHENA_PROC_NUMBER=12
[2025-06-07 01:22:47] Set ATHENA_CORE_NUMBER=12
[2025-06-07 01:22:47] Starting ATLAS job with PandaID=6678075774
[2025-06-07 01:22:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 07:22:42]  *** The last 200 lines of the pilot log: ***
[2025-06-07 07:22:42] 2025-06-07 07:22:18,926 | INFO     | monitor loop #1554: job 0:6678075774 is in state 'finished'
[2025-06-07 07:22:42] 2025-06-07 07:22:18,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 07:22:42] 2025-06-07 07:22:21,438 | INFO     | monitor loop #1555: job 0:6678075774 is in state 'finished'
[2025-06-07 07:22:42] 2025-06-07 07:22:21,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 07:22:42] 2025-06-07 07:22:23,950 | INFO     | monitor loop #1556: job 0:6678075774 is in state 'finished'
[2025-06-07 07:22:42] 2025-06-07 07:22:23,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 07:22:42] 2025-06-07 07:22:25,926 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-07 07:22:42] 2025-06-07 07:22:25,926 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6678075774/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 07:22:42] 2025-06-07 07:22:25,927 | INFO     | extracted standard info from prmon json
[2025-06-07 07:22:42] 2025-06-07 07:22:25,927 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 07:22:42] 2025-06-07 07:22:25,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 07:22:42] 2025-06-07 07:22:25,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 07:22:42] 2025-06-07 07:22:25,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 07:22:42] 2025-06-07 07:22:25,934 | INFO     | fitting pss+swap vs Time
[2025-06-07 07:22:42] 2025-06-07 07:22:25,942 | INFO     | sum of square deviations: 13294640632.28857
[2025-06-07 07:22:42] 2025-06-07 07:22:25,944 | INFO     | sum of deviations: 36399995666.70572
[2025-06-07 07:22:42] 2025-06-07 07:22:25,944 | INFO     | mean x: 1749270199.6942856
[2025-06-07 07:22:42] 2025-06-07 07:22:25,944 | INFO     | mean y: 2654790.202857143
[2025-06-07 07:22:42] 2025-06-07 07:22:25,944 | INFO     | -- intersect: -4786750914.688961
[2025-06-07 07:22:42] 2025-06-07 07:22:25,944 | INFO     | intersect: -4786750914.688961
[2025-06-07 07:22:42] 2025-06-07 07:22:25,945 | INFO     | chi2: 4.193077967582527
[2025-06-07 07:22:42] 2025-06-07 07:22:25,945 | INFO     | sum of square deviations: 12732985724.59715
[2025-06-07 07:22:42] 2025-06-07 07:22:25,955 | INFO     | sum of deviations: 58844001740.98552
[2025-06-07 07:22:42] 2025-06-07 07:22:25,955 | INFO     | mean x: 1749270047.1971014
[2025-06-07 07:22:42] 2025-06-07 07:22:25,955 | INFO     | mean y: 2660810.9855072466
[2025-06-07 07:22:42] 2025-06-07 07:22:25,955 | INFO     | -- intersect: -8081385769.218815
[2025-06-07 07:22:42] 2025-06-07 07:22:25,955 | INFO     | intersect: -8081385769.218815
[2025-06-07 07:22:42] 2025-06-07 07:22:25,955 | INFO     | chi2: 3.5049214363413688
[2025-06-07 07:22:42] 2025-06-07 07:22:25,956 | INFO     | current chi2=3.5049214363413688 (change=16.411727531932993 %)
[2025-06-07 07:22:42] 2025-06-07 07:22:25,956 | INFO     | right removable region: 344
[2025-06-07 07:22:42] 2025-06-07 07:22:25,956 | INFO     | sum of square deviations: 12732944244.597147
[2025-06-07 07:22:42] 2025-06-07 07:22:25,963 | INFO     | sum of deviations: -65443565209.06378
[2025-06-07 07:22:42] 2025-06-07 07:22:25,963 | INFO     | mean x: 1749270352.1971014
[2025-06-07 07:22:42] 2025-06-07 07:22:25,963 | INFO     | mean y: 2682385.736231884
[2025-06-07 07:22:42] 2025-06-07 07:22:25,963 | INFO     | -- intersect: 8993414314.124954
[2025-06-07 07:22:42] 2025-06-07 07:22:25,963 | INFO     | intersect: 8993414314.124954
[2025-06-07 07:22:42] 2025-06-07 07:22:25,964 | INFO     | chi2: 1.3025193371540942
[2025-06-07 07:22:42] 2025-06-07 07:22:25,964 | INFO     | current chi2=1.3025193371540942 (change=68.93643888274637 %)
[2025-06-07 07:22:42] 2025-06-07 07:22:25,964 | INFO     | sum of square deviations: 12187294669.39999
[2025-06-07 07:22:42] 2025-06-07 07:22:25,966 | INFO     | sum of deviations: -90282307630.1
[2025-06-07 07:22:42] 2025-06-07 07:22:25,966 | INFO     | mean x: 1749270504.7
[2025-06-07 07:22:42] 2025-06-07 07:22:25,966 | INFO     | mean y: 2689318.3911764706
[2025-06-07 07:22:42] 2025-06-07 07:22:25,978 | INFO     | -- intersect: 12961117100.572706
[2025-06-07 07:22:42] 2025-06-07 07:22:25,978 | INFO     | intersect: 12961117100.572706
[2025-06-07 07:22:42] 2025-06-07 07:22:25,978 | INFO     | chi2: 1.1040623584746827
[2025-06-07 07:22:42] 2025-06-07 07:22:25,979 | INFO     | current chi2=1.1040623584746827 (change=15.236394041797869 %)
[2025-06-07 07:22:42] 2025-06-07 07:22:25,979 | INFO     | left removable region: 20
[2025-06-07 07:22:42] 2025-06-07 07:22:25,979 | INFO     | sum of square deviations: 10546431511.55559
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | sum of deviations: -62224813647.037125
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | mean x: 1749270626.7037036
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | mean y: 2694697.114197531
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | -- intersect: 10323535319.424255
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | intersect: 10323535319.424255
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | chi2: 0.3222974185863377
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | -- intersect: 10323535319.424255
[2025-06-07 07:22:42] 2025-06-07 07:22:25,981 | INFO     | current memory leak: -5.90 B/s (using 324 data points, chi2=0.32)
[2025-06-07 07:22:42] 2025-06-07 07:22:25,982 | INFO     | ..............................
[2025-06-07 07:22:42] 2025-06-07 07:22:25,982 | INFO     | . Timing measurements:
[2025-06-07 07:22:42] 2025-06-07 07:22:25,982 | INFO     | . get job = 0 s
[2025-06-07 07:22:42] 2025-06-07 07:22:25,982 | INFO     | . initial setup = 5 s
[2025-06-07 07:22:42] 2025-06-07 07:22:26,002 | INFO     | . payload setup = 67 s
[2025-06-07 07:22:42] 2025-06-07 07:22:26,002 | INFO     | . stage-in = 0 s
[2025-06-07 07:22:42] 2025-06-07 07:22:26,002 | INFO     | . payload execution = 21329 s
[2025-06-07 07:22:42] 2025-06-07 07:22:26,002 | INFO     | . stage-out = 3 s
[2025-06-07 07:22:42] 2025-06-07 07:22:26,002 | INFO     | . log creation = 1 s
[2025-06-07 07:22:42] 2025-06-07 07:22:26,002 | INFO     | ..............................
[2025-06-07 07:22:42] 2025-06-07 07:22:26,305 | INFO     | 
[2025-06-07 07:22:42] 2025-06-07 07:22:26,305 | INFO     | job summary report
[2025-06-07 07:22:42] 2025-06-07 07:22:26,305 | INFO     | --------------------------------------------------
[2025-06-07 07:22:42] 2025-06-07 07:22:26,305 | INFO     | PanDA job id: 6678075774
[2025-06-07 07:22:42] 2025-06-07 07:22:26,305 | INFO     | task id: 45006595
[2025-06-07 07:22:42] 2025-06-07 07:22:26,305 | INFO     | errors: (none)
[2025-06-07 07:22:42] 2025-06-07 07:22:26,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | pilot state: finished 
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | transexitcode: 0
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | exeerrorcode: 0
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | exeerrordiag: 
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | exitcode: 0
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | exitmsg: OK
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | cpuconsumptiontime: 31793 s
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | nevents: 400
[2025-06-07 07:22:42] 2025-06-07 07:22:26,306 | INFO     | neventsw: 0
[2025-06-07 07:22:42] 2025-06-07 07:22:26,310 | INFO     | pid: 1431208
[2025-06-07 07:22:42] 2025-06-07 07:22:26,310 | INFO     | pgrp: 1431208
[2025-06-07 07:22:42] 2025-06-07 07:22:26,310 | INFO     | corecount: 12
[2025-06-07 07:22:42] 2025-06-07 07:22:26,310 | INFO     | event service: False
[2025-06-07 07:22:42] 2025-06-07 07:22:26,310 | INFO     | sizes: {0: 2397194, 1: 2397393, 12: 2397393, 23: 2397421, 25: 2397655, 34: 2397683, 21401: 2430876, 21402: 2430875, 21406: 2439974, 21479: 2440088}
[2025-06-07 07:22:42] 2025-06-07 07:22:26,310 | INFO     | --------------------------------------------------
[2025-06-07 07:22:42] 2025-06-07 07:22:26,310 | INFO     | 
[2025-06-07 07:22:42] 2025-06-07 07:22:26,311 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-07 07:22:42] 2025-06-07 07:22:26,390 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,392 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 07:22:42] 2025-06-07 07:22:26,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 07:22:42] 2025-06-07 07:22:26,392 | INFO     | job 6678075774 has completed (purged errors)
[2025-06-07 07:22:42] 2025-06-07 07:22:26,392 | INFO     | overall cleanup function is called
[2025-06-07 07:22:42] 2025-06-07 07:22:27,402 | INFO     | --- collectZombieJob: --- 10, [1431208]
[2025-06-07 07:22:42] 2025-06-07 07:22:27,402 | INFO     | zombie collector waiting for pid 1431208
[2025-06-07 07:22:42] 2025-06-07 07:22:27,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 07:22:42] 2025-06-07 07:22:27,402 | INFO     | collected zombie processes
[2025-06-07 07:22:42] 2025-06-07 07:22:27,402 | INFO     | will attempt to kill all subprocesses of pid=1431208
[2025-06-07 07:22:42] 2025-06-07 07:22:27,530 | INFO     | process IDs to be killed: [1431208] (in reverse order)
[2025-06-07 07:22:42] 2025-06-07 07:22:27,855 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 07:22:42] 2025-06-07 07:22:27,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 07:22:42] 2025-06-07 07:22:27,856 | INFO     | did not find any defunct processes belonging to 1431208
[2025-06-07 07:22:42] 2025-06-07 07:22:27,857 | INFO     | did not find any defunct processes belonging to 1431208
[2025-06-07 07:22:42] 2025-06-07 07:22:27,858 | INFO     | ready for new job
[2025-06-07 07:22:42] 2025-06-07 07:22:27,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 07:22:42] 2025-06-07 07:22:27,867 | INFO     | **************************************
[2025-06-07 07:22:42] 2025-06-07 07:22:27,867 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 07:22:42] 2025-06-07 07:22:27,867 | INFO     | **************************************
[2025-06-07 07:22:42] 2025-06-07 07:22:27,867 | INFO     | 
[2025-06-07 07:22:42] 2025-06-07 07:22:27,886 | INFO     | architecture information:
[2025-06-07 07:22:42] 2025-06-07 07:22:27,890 | INFO     | executing command: cat /etc/os-release
[2025-06-07 07:22:42] 2025-06-07 07:22:27,958 | INFO     | cat /etc/os-release:
[2025-06-07 07:22:42] NAME="CentOS Linux"
[2025-06-07 07:22:42] VERSION="7 (Core)"
[2025-06-07 07:22:42] ID="centos"
[2025-06-07 07:22:42] ID_LIKE="rhel fedora"
[2025-06-07 07:22:42] VERSION_ID="7"
[2025-06-07 07:22:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 07:22:42] ANSI_COLOR="0;31"
[2025-06-07 07:22:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 07:22:42] HOME_URL="https://www.centos.org/"
[2025-06-07 07:22:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 07:22:42] 
[2025-06-07 07:22:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 07:22:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 07:22:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 07:22:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 07:22:42] 
[2025-06-07 07:22:42] 2025-06-07 07:22:27,958 | INFO     | **************************************
[2025-06-07 07:22:42] 2025-06-07 07:22:28,462 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-07 07:22:42] 2025-06-07 07:22:28,551 | INFO     | sufficient remaining disk space (183853121536 B)
[2025-06-07 07:22:42] 2025-06-07 07:22:28,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 07:22:42] 2025-06-07 07:22:28,551 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 07:22:42] 2025-06-07 07:22:28,551 | INFO     | update_server=False
[2025-06-07 07:22:42] 2025-06-07 07:22:28,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 07:22:42] 2025-06-07 07:22:28,702 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 07:22:42] 2025-06-07 07:22:28,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 07:22:42] 2025-06-07 07:22:28,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 07:22:42] 2025-06-07 07:22:28,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 07:22:42] 2025-06-07 07:22:28,786 | INFO     | all job control threads have been joined
[2025-06-07 07:22:42] 2025-06-07 07:22:28,890 | INFO     | all payload control threads have been joined
[2025-06-07 07:22:42] 2025-06-07 07:22:28,998 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-07 07:22:42] 2025-06-07 07:22:28,998 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-07 07:22:42] 2025-06-07 07:22:28,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 07:22:42] 2025-06-07 07:22:28,998 | INFO     | will abort loop
[2025-06-07 07:22:42] 2025-06-07 07:22:29,286 | INFO     | all data control threads have been joined
[2025-06-07 07:22:42] 2025-06-07 07:22:29,554 | INFO     | [job] retrieve thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:29,566 | INFO     | [job] validate thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:29,794 | INFO     | [job] control thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:29,898 | INFO     | [payload] control thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:29,942 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,002 | INFO     | [job] job monitor thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,290 | INFO     | [data] control thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,490 | INFO     | [payload] validate_post thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,714 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,754 | INFO     | [data] copytool_in thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,762 | INFO     | [data] copytool_out thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:30,966 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:31,150 | INFO     | [payload] failed_post thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:31,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 07:22:42] 2025-06-07 07:22:31,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 07:22:42] 2025-06-07 07:22:32,330 | INFO     | [job] queue monitor thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:35,454 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 07:22:42] 2025-06-07 07:22:36,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629567014720)>', '<ExcThread(monitor, started 140628889425664)>']
[2025-06-07 07:22:42] 2025-06-07 07:22:36,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 07:22:42] 2025-06-07 07:22:36,742 | INFO     | [monitor] control thread has ended
[2025-06-07 07:22:42] 2025-06-07 07:22:41,742 | INFO     | all workflow threads have been joined
[2025-06-07 07:22:42] 2025-06-07 07:22:41,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 07:22:42] 2025-06-07 07:22:41,742 | INFO     | traces error code: 0
[2025-06-07 07:22:42] 2025-06-07 07:22:41,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 07:22:42] 2025-06-07 07:22:42,119 [wrapper] ==== pilot stdout END ====
[2025-06-07 07:22:42] 2025-06-07 07:22:42,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 07:22:42] 2025-06-07 07:22:42,190 [wrapper] pilotpid: 1424787
[2025-06-07 07:22:42] 2025-06-07 07:22:42,221 [wrapper] Pilot exit status: 0
[2025-06-07 07:22:42] 2025-06-07 07:22:42,275 [wrapper] pandaids: 6678075774
[2025-06-07 07:22:42] 2025-06-07 07:22:42,307 [wrapper] cleanup supervisor_pilot 1503310 1424788
[2025-06-07 07:22:42] 2025-06-07 07:22:42,315 [wrapper] Test setup, not cleaning
[2025-06-07 07:22:42] 2025-06-07 07:22:42,326 [wrapper] apfmon messages muted
[2025-06-07 07:22:42] 2025-06-07 07:22:42,335 [wrapper] ==== wrapper stdout END ====
[2025-06-07 07:22:42] 2025-06-07 07:22:42,379 [wrapper] ==== wrapper stderr END ====
[2025-06-07 07:22:42]  *** Error codes and diagnostics ***
[2025-06-07 07:22:42]     "exeErrorCode": 0,
[2025-06-07 07:22:42]     "exeErrorDiag": "",
[2025-06-07 07:22:42]     "pilotErrorCode": 0,
[2025-06-07 07:22:42]     "pilotErrorDiag": "",
[2025-06-07 07:22:42]  *** Listing of results directory ***
[2025-06-07 07:22:42] total 392016
[2025-06-07 07:22:42] -rw-r--r-- 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-07 07:22:42] -rwx------ 1 boinc boinc     37140 Jun  3 21:45 runpilot2-wrapper.sh
[2025-06-07 07:22:42] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:45 queuedata.json
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc       100 Jun  7 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 07:22:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  7 01:22 run_atlas
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc       105 Jun  7 01:22 job.xml
[2025-06-07 07:22:42] -rw-r--r-- 2 boinc boinc     15093 Jun  7 01:22 start_atlas.sh
[2025-06-07 07:22:42] drwxrwx--x 2 boinc boinc      4096 Jun  7 01:22 shared
[2025-06-07 07:22:42] -rw-r--r-- 2 boinc boinc    508879 Jun  7 01:22 input.tar.gz
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc      9280 Jun  7 01:22 init_data.xml
[2025-06-07 07:22:42] -rw-r--r-- 2 boinc boinc 213517697 Jun  7 01:22 EVNT.45006593._001860.pool.root.1
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc         0 Jun  7 01:22 boinc_lockfile
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc      2525 Jun  7 01:22 pandaJob.out
[2025-06-07 07:22:42] -rw------- 1 boinc boinc    985748 Jun  7 01:23 agis_schedconf.cvmfs.json
[2025-06-07 07:22:42] drwx------ 4 boinc boinc      4096 Jun  7 01:23 pilot3
[2025-06-07 07:22:42] -rw------- 1 boinc boinc 179109595 Jun  7 07:19 HITS.45006595._046381.pool.root.1
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc       530 Jun  7 07:19 boinc_task_state.xml
[2025-06-07 07:22:42] -rw------- 1 boinc boinc      1019 Jun  7 07:21 memory_monitor_summary.json
[2025-06-07 07:22:42] -rw------- 1 boinc boinc   1598969 Jun  7 07:21 agis_ddmendpoints.agis.ALL.json
[2025-06-07 07:22:42] -rw------- 1 boinc boinc    520246 Jun  7 07:21 log.45006595._046381.job.log.tgz.1
[2025-06-07 07:22:42] -rw------- 1 boinc boinc        95 Jun  7 07:22 pilot_heartbeat.json
[2025-06-07 07:22:42] -rw------- 1 boinc boinc      7657 Jun  7 07:22 heartbeat.json
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc        28 Jun  7 07:22 wrapper_checkpoint.txt
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc      8192 Jun  7 07:22 boinc_mmap_file
[2025-06-07 07:22:42] -rw------- 1 boinc boinc      4563 Jun  7 07:22 pilotlog.txt
[2025-06-07 07:22:42] -rw------- 1 boinc boinc   1960120 Jun  7 07:22 log.45006595._046381.job.log.1
[2025-06-07 07:22:42] -rw------- 1 boinc boinc       357 Jun  7 07:22 output.list
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc       620 Jun  7 07:22 runtime_log
[2025-06-07 07:22:42] -rw------- 1 boinc boinc   2498560 Jun  7 07:22 result.tar.gz
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc      8944 Jun  7 07:22 runtime_log.err
[2025-06-07 07:22:42] -rw------- 1 boinc boinc       652 Jun  7 07:22 XDlNDmJdog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmf0ZKDmWbnbxn.diag
[2025-06-07 07:22:42] -rw-rw-r-- 1 boinc boinc     21322 Jun  7 07:22 stderr.txt
[2025-06-07 07:22:42] HITS file was successfully produced:
[2025-06-07 07:22:43] -rw------- 1 boinc boinc 179109595 Jun  7 07:19 shared/HITS.pool.root.1
[2025-06-07 07:22:43]  *** Contents of shared directory: ***
[2025-06-07 07:22:43] total 386392
[2025-06-07 07:22:43] -rw-r--r-- 2 boinc boinc     15093 Jun  7 01:22 start_atlas.sh
[2025-06-07 07:22:43] -rw-r--r-- 2 boinc boinc    508879 Jun  7 01:22 input.tar.gz
[2025-06-07 07:22:43] -rw-r--r-- 2 boinc boinc 213517697 Jun  7 01:22 ATLAS.root_0
[2025-06-07 07:22:43] -rw------- 1 boinc boinc 179109595 Jun  7 07:19 HITS.pool.root.1
[2025-06-07 07:22:43] -rw------- 1 boinc boinc   2498560 Jun  7 07:22 result.tar.gz
07:22:44 (1421207): run_atlas exited; CPU time 31892.946242
07:22:44 (1421207): called boinc_finish(0)

</stderr_txt>
]]>

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