Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:58:32 (1172267): wrapper (7.7.26015): starting
06:58:32 (1172267): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 06:58:32] Arguments: --nthreads 12
[2025-06-06 06:58:32] Threads: 12
[2025-06-06 06:58:32] Checking for CVMFS
[2025-06-06 06:58:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:58:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:58:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:58:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:58:35] 2.12.7.0 19605 4221 55356 146846 2 60 3722782 4096000 912 130560 0 2991369 99.989 1024152 179 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 06:58:35] CVMFS is ok
[2025-06-06 06:58:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:58:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 06:58:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 06:58:35] Further information can be found at the LHC@home message board.
[2025-06-06 06:58:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:58:35] Checking for apptainer binary...
[2025-06-06 06:58:35] apptainer is not installed, using version from CVMFS
[2025-06-06 06:58:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:58:37] g630
[2025-06-06 06:58:37] apptainer works
[2025-06-06 06:58:37] Set ATHENA_PROC_NUMBER=12
[2025-06-06 06:58:37] Set ATHENA_CORE_NUMBER=12
[2025-06-06 06:58:37] Starting ATLAS job with PandaID=6678363751
[2025-06-06 06:58:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:48:02]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:48:02] 2025-06-06 13:47:44,006 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6678363751/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,007 | INFO     | extracted standard info from prmon json
[2025-06-06 13:48:02] 2025-06-06 13:47:44,007 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:48:02] 2025-06-06 13:47:44,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:48:02] 2025-06-06 13:47:44,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:48:02] 2025-06-06 13:47:44,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:48:02] 2025-06-06 13:47:44,054 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:48:02] 2025-06-06 13:47:44,055 | INFO     | sum of square deviations: 19255610600.75504
[2025-06-06 13:48:02] 2025-06-06 13:47:44,057 | INFO     | sum of deviations: 143447578187.19202
[2025-06-06 13:48:02] 2025-06-06 13:47:44,057 | INFO     | mean x: 1749205477.8964646
[2025-06-06 13:48:02] 2025-06-06 13:47:44,057 | INFO     | mean y: 2661570.5656565656
[2025-06-06 13:48:02] 2025-06-06 13:47:44,058 | INFO     | -- intersect: -13028308714.332958
[2025-06-06 13:48:02] 2025-06-06 13:47:44,058 | INFO     | intersect: -13028308714.332958
[2025-06-06 13:48:02] 2025-06-06 13:47:44,078 | INFO     | chi2: 6.13118324842084
[2025-06-06 13:48:02] 2025-06-06 13:47:44,078 | INFO     | sum of square deviations: 18535440329.958984
[2025-06-06 13:48:02] 2025-06-06 13:47:44,081 | INFO     | sum of deviations: 168982196634.11215
[2025-06-06 13:48:02] 2025-06-06 13:47:44,081 | INFO     | mean x: 1749205325.4015346
[2025-06-06 13:48:02] 2025-06-06 13:47:44,081 | INFO     | mean y: 2666920.145780051
[2025-06-06 13:48:02] 2025-06-06 13:47:44,081 | INFO     | -- intersect: -15944327215.876038
[2025-06-06 13:48:02] 2025-06-06 13:47:44,081 | INFO     | intersect: -15944327215.876038
[2025-06-06 13:48:02] 2025-06-06 13:47:44,081 | INFO     | chi2: 5.441246716251869
[2025-06-06 13:48:02] 2025-06-06 13:47:44,081 | INFO     | current chi2=5.441246716251869 (change=11.25290998840514 %)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,082 | INFO     | right removable region: 390
[2025-06-06 13:48:02] 2025-06-06 13:47:44,082 | INFO     | sum of square deviations: 18535344559.958973
[2025-06-06 13:48:02] 2025-06-06 13:47:44,092 | INFO     | sum of deviations: 7125127878.936047
[2025-06-06 13:48:02] 2025-06-06 13:47:44,092 | INFO     | mean x: 1749205630.4015346
[2025-06-06 13:48:02] 2025-06-06 13:47:44,092 | INFO     | mean y: 2690405.4398976984
[2025-06-06 13:48:02] 2025-06-06 13:47:44,093 | INFO     | -- intersect: -669717585.8358504
[2025-06-06 13:48:02] 2025-06-06 13:47:44,093 | INFO     | intersect: -669717585.8358504
[2025-06-06 13:48:02] 2025-06-06 13:47:44,093 | INFO     | chi2: 2.2418571568580203
[2025-06-06 13:48:02] 2025-06-06 13:47:44,093 | INFO     | current chi2=2.2418571568580203 (change=63.4351630668446 %)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,093 | INFO     | sum of square deviations: 17833264906.642483
[2025-06-06 13:48:02] 2025-06-06 13:47:44,108 | INFO     | sum of deviations: -54443158463.73053
[2025-06-06 13:48:02] 2025-06-06 13:47:44,108 | INFO     | mean x: 1749205782.9067357
[2025-06-06 13:48:02] 2025-06-06 13:47:44,108 | INFO     | mean y: 2703742.896373057
[2025-06-06 13:48:02] 2025-06-06 13:47:44,108 | INFO     | -- intersect: 5342852511.111742
[2025-06-06 13:48:02] 2025-06-06 13:47:44,108 | INFO     | intersect: 5342852511.111742
[2025-06-06 13:48:02] 2025-06-06 13:47:44,108 | INFO     | chi2: 1.350161563841982
[2025-06-06 13:48:02] 2025-06-06 13:47:44,108 | INFO     | current chi2=1.350161563841982 (change=39.774862117698724 %)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,109 | INFO     | sum of square deviations: 17149139078.304428
[2025-06-06 13:48:02] 2025-06-06 13:47:44,126 | INFO     | sum of deviations: -84248090676.50912
[2025-06-06 13:48:02] 2025-06-06 13:47:44,126 | INFO     | mean x: 1749205935.4120734
[2025-06-06 13:48:02] 2025-06-06 13:47:44,126 | INFO     | mean y: 2710392.3280839897
[2025-06-06 13:48:02] 2025-06-06 13:47:44,126 | INFO     | -- intersect: 8595984934.309046
[2025-06-06 13:48:02] 2025-06-06 13:47:44,126 | INFO     | intersect: 8595984934.309046
[2025-06-06 13:48:02] 2025-06-06 13:47:44,126 | INFO     | chi2: 1.1331216467763063
[2025-06-06 13:48:02] 2025-06-06 13:47:44,126 | INFO     | current chi2=1.1331216467763063 (change=16.075107074450624 %)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,127 | INFO     | left removable region: 30
[2025-06-06 13:48:02] 2025-06-06 13:47:44,127 | INFO     | sum of square deviations: 14466755330.399906
[2025-06-06 13:48:02] 2025-06-06 13:47:44,129 | INFO     | sum of deviations: -106906542986.2667
[2025-06-06 13:48:02] 2025-06-06 13:47:44,129 | INFO     | mean x: 1749206209.9333334
[2025-06-06 13:48:02] 2025-06-06 13:47:44,129 | INFO     | mean y: 2728774.5305555556
[2025-06-06 13:48:02] 2025-06-06 13:47:44,129 | INFO     | -- intersect: 12929026662.566603
[2025-06-06 13:48:02] 2025-06-06 13:47:44,129 | INFO     | intersect: 12929026662.566603
[2025-06-06 13:48:02] 2025-06-06 13:47:44,129 | INFO     | chi2: 0.0785252159263045
[2025-06-06 13:48:02] 2025-06-06 13:47:44,130 | INFO     | -- intersect: 12929026662.566603
[2025-06-06 13:48:02] 2025-06-06 13:47:44,130 | INFO     | current memory leak: -7.39 B/s (using 360 data points, chi2=0.08)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,146 | INFO     | ..............................
[2025-06-06 13:48:02] 2025-06-06 13:47:44,146 | INFO     | . Timing measurements:
[2025-06-06 13:48:02] 2025-06-06 13:47:44,146 | INFO     | . get job = 0 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,146 | INFO     | . initial setup = 10 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,147 | INFO     | . payload setup = 114 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,147 | INFO     | . stage-in = 0 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,147 | INFO     | . payload execution = 24174 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,147 | INFO     | . stage-out = 4 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,147 | INFO     | . log creation = 1 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,147 | INFO     | ..............................
[2025-06-06 13:48:02] 2025-06-06 13:47:44,456 | INFO     | 
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | job summary report
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | --------------------------------------------------
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | PanDA job id: 6678363751
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | task id: 45006595
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | errors: (none)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | pilot state: finished 
[2025-06-06 13:48:02] 2025-06-06 13:47:44,462 | INFO     | transexitcode: 0
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | exeerrorcode: 0
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | exeerrordiag: 
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | exitcode: 0
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | exitmsg: OK
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | cpuconsumptiontime: 32553 s
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | nevents: 400
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | neventsw: 0
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | pid: 1182277
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | pgrp: 1182277
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | corecount: 12
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | event service: False
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | sizes: {0: 2397138, 1: 2397222, 2: 2397421, 13: 2397421, 24: 2397477, 35: 2397505, 38: 2397867, 46: 2397895, 24293: 2432224, 24294: 2432223, 24299: 2441602, 24381:
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | --------------------------------------------------
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | 
[2025-06-06 13:48:02] 2025-06-06 13:47:44,463 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 13:48:02] 2025-06-06 13:47:44,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,734 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,734 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,734 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:48:02] 2025-06-06 13:47:44,736 | INFO     | job 6678363751 has completed (purged errors)
[2025-06-06 13:48:02] 2025-06-06 13:47:44,736 | INFO     | overall cleanup function is called
[2025-06-06 13:48:02] 2025-06-06 13:47:45,742 | INFO     | --- collectZombieJob: --- 10, [1182277]
[2025-06-06 13:48:02] 2025-06-06 13:47:45,742 | INFO     | zombie collector waiting for pid 1182277
[2025-06-06 13:48:02] 2025-06-06 13:47:45,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:48:02] 2025-06-06 13:47:45,742 | INFO     | collected zombie processes
[2025-06-06 13:48:02] 2025-06-06 13:47:45,742 | INFO     | will attempt to kill all subprocesses of pid=1182277
[2025-06-06 13:48:02] 2025-06-06 13:47:46,013 | INFO     | process IDs to be killed: [1182277] (in reverse order)
[2025-06-06 13:48:02] 2025-06-06 13:47:46,734 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:48:02] 2025-06-06 13:47:46,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:48:02] 2025-06-06 13:47:46,736 | INFO     | did not find any defunct processes belonging to 1182277
[2025-06-06 13:48:02] 2025-06-06 13:47:46,737 | INFO     | did not find any defunct processes belonging to 1182277
[2025-06-06 13:48:02] 2025-06-06 13:47:46,737 | INFO     | ready for new job
[2025-06-06 13:48:02] 2025-06-06 13:47:46,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:48:02] 2025-06-06 13:47:46,760 | INFO     | **************************************
[2025-06-06 13:48:02] 2025-06-06 13:47:46,760 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:48:02] 2025-06-06 13:47:46,760 | INFO     | **************************************
[2025-06-06 13:48:02] 2025-06-06 13:47:46,761 | INFO     | 
[2025-06-06 13:48:02] 2025-06-06 13:47:46,778 | INFO     | architecture information:
[2025-06-06 13:48:02] 2025-06-06 13:47:46,794 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:48:02] 2025-06-06 13:47:46,906 | INFO     | cat /etc/os-release:
[2025-06-06 13:48:02] NAME="CentOS Linux"
[2025-06-06 13:48:02] VERSION="7 (Core)"
[2025-06-06 13:48:02] ID="centos"
[2025-06-06 13:48:02] ID_LIKE="rhel fedora"
[2025-06-06 13:48:02] VERSION_ID="7"
[2025-06-06 13:48:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:48:02] ANSI_COLOR="0;31"
[2025-06-06 13:48:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:48:02] HOME_URL="https://www.centos.org/"
[2025-06-06 13:48:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:48:02] 
[2025-06-06 13:48:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:48:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:48:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:48:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:48:02] 
[2025-06-06 13:48:02] 2025-06-06 13:47:46,906 | INFO     | **************************************
[2025-06-06 13:48:02] 2025-06-06 13:47:47,409 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 13:48:02] 2025-06-06 13:47:47,618 | INFO     | sufficient remaining disk space (181619654656 B)
[2025-06-06 13:48:02] 2025-06-06 13:47:47,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:48:02] 2025-06-06 13:47:47,619 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:48:02] 2025-06-06 13:47:47,619 | INFO     | update_server=False
[2025-06-06 13:48:02] 2025-06-06 13:47:47,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:48:02] 2025-06-06 13:47:47,619 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 13:48:02] 2025-06-06 13:47:47,619 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:48:02] 2025-06-06 13:47:47,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:48:02] 2025-06-06 13:47:47,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:48:02] 2025-06-06 13:47:47,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:48:02] 2025-06-06 13:47:47,950 | INFO     | aborting loop
[2025-06-06 13:48:02] 2025-06-06 13:47:48,398 | INFO     | all payload control threads have been joined
[2025-06-06 13:48:02] 2025-06-06 13:47:48,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:48:02] 2025-06-06 13:47:48,622 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:48,634 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:48,646 | INFO     | all data control threads have been joined
[2025-06-06 13:48:02] 2025-06-06 13:47:48,958 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:49,038 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:49,314 | INFO     | all job control threads have been joined
[2025-06-06 13:48:02] 2025-06-06 13:47:49,406 | INFO     | [payload] control thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:49,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:48:02] 2025-06-06 13:47:49,651 | INFO     | [data] control thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:49,666 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:49,842 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:49,842 | INFO     | [job] validate thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:49,974 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:50,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:50,174 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:50,318 | INFO     | [job] control thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:50,491 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:50,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:48:02] 2025-06-06 13:47:50,630 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:54,582 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:48:02] 2025-06-06 13:47:56,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088175261504)>', '<ExcThread(monitor, started 140087597721344)>']
[2025-06-06 13:48:02] 2025-06-06 13:47:56,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:48:02] 2025-06-06 13:47:56,662 | INFO     | [monitor] control thread has ended
[2025-06-06 13:48:02] 2025-06-06 13:48:01,586 | INFO     | all workflow threads have been joined
[2025-06-06 13:48:02] 2025-06-06 13:48:01,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:48:02] 2025-06-06 13:48:01,586 | INFO     | traces error code: 0
[2025-06-06 13:48:02] 2025-06-06 13:48:01,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:48:02] 2025-06-06 13:48:02,478 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:48:02] 2025-06-06 13:48:02,578 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:48:02] 2025-06-06 13:48:02,594 [wrapper] pilotpid: 1175851
[2025-06-06 13:48:02] 2025-06-06 13:48:02,619 [wrapper] Pilot exit status: 0
[2025-06-06 13:48:02] 2025-06-06 13:48:02,750 [wrapper] pandaids: 6678363751
[2025-06-06 13:48:02] 2025-06-06 13:48:02,862 [wrapper] cleanup supervisor_pilot 1264454 1175852
[2025-06-06 13:48:02] 2025-06-06 13:48:02,886 [wrapper] Test setup, not cleaning
[2025-06-06 13:48:02] 2025-06-06 13:48:02,895 [wrapper] apfmon messages muted
[2025-06-06 13:48:02] 2025-06-06 13:48:02,896 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:48:02] 2025-06-06 13:48:02,898 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:48:03]  *** Error codes and diagnostics ***
[2025-06-06 13:48:03]     "exeErrorCode": 0,
[2025-06-06 13:48:03]     "exeErrorDiag": "",
[2025-06-06 13:48:03]     "pilotErrorCode": 0,
[2025-06-06 13:48:03]     "pilotErrorDiag": "",
[2025-06-06 13:48:03]  *** Listing of results directory ***
[2025-06-06 13:48:03] total 398120
[2025-06-06 13:48:03] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 13:48:03] -rwx------ 1 boinc boinc     37140 Jun  4 05:36 runpilot2-wrapper.sh
[2025-06-06 13:48:03] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:36 queuedata.json
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc       100 Jun  6 06:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:48:03] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 06:58 run_atlas
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc       105 Jun  6 06:58 job.xml
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc      9280 Jun  6 06:58 init_data.xml
[2025-06-06 13:48:03] -rw-r--r-- 2 boinc boinc 213660114 Jun  6 06:58 EVNT.45006593._002146.pool.root.1
[2025-06-06 13:48:03] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:58 start_atlas.sh
[2025-06-06 13:48:03] drwxrwx--x 2 boinc boinc      4096 Jun  6 06:58 shared
[2025-06-06 13:48:03] -rw-r--r-- 2 boinc boinc    508884 Jun  6 06:58 input.tar.gz
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc         0 Jun  6 06:58 boinc_lockfile
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 06:58 pandaJob.out
[2025-06-06 13:48:03] -rw------- 1 boinc boinc    988117 Jun  6 06:59 agis_schedconf.cvmfs.json
[2025-06-06 13:48:03] drwx------ 4 boinc boinc      4096 Jun  6 07:00 pilot3
[2025-06-06 13:48:03] -rw------- 1 boinc boinc 184622567 Jun  6 13:44 HITS.45006595._053626.pool.root.1
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc       530 Jun  6 13:44 boinc_task_state.xml
[2025-06-06 13:48:03] -rw------- 1 boinc boinc      1033 Jun  6 13:46 memory_monitor_summary.json
[2025-06-06 13:48:03] -rw------- 1 boinc boinc   1598969 Jun  6 13:46 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:48:03] -rw------- 1 boinc boinc    547894 Jun  6 13:46 log.45006595._053626.job.log.tgz.1
[2025-06-06 13:48:03] -rw------- 1 boinc boinc        95 Jun  6 13:47 pilot_heartbeat.json
[2025-06-06 13:48:03] -rw------- 1 boinc boinc      7664 Jun  6 13:47 heartbeat.json
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc        28 Jun  6 13:47 wrapper_checkpoint.txt
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 13:47 boinc_mmap_file
[2025-06-06 13:48:03] -rw------- 1 boinc boinc      4500 Jun  6 13:48 pilotlog.txt
[2025-06-06 13:48:03] -rw------- 1 boinc boinc   2228181 Jun  6 13:48 log.45006595._053626.job.log.1
[2025-06-06 13:48:03] -rw------- 1 boinc boinc       357 Jun  6 13:48 output.list
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc       620 Jun  6 13:48 runtime_log
[2025-06-06 13:48:03] -rw------- 1 boinc boinc   2795520 Jun  6 13:48 result.tar.gz
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc      8944 Jun  6 13:48 runtime_log.err
[2025-06-06 13:48:03] -rw------- 1 boinc boinc       652 Jun  6 13:48 IUvMDmnyvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbnaKDmNBnZ4m.diag
[2025-06-06 13:48:03] -rw-rw-r-- 1 boinc boinc     21154 Jun  6 13:48 stderr.txt
[2025-06-06 13:48:03] HITS file was successfully produced:
[2025-06-06 13:48:03] -rw------- 1 boinc boinc 184622567 Jun  6 13:44 shared/HITS.pool.root.1
[2025-06-06 13:48:03]  *** Contents of shared directory: ***
[2025-06-06 13:48:03] total 392208
[2025-06-06 13:48:03] -rw-r--r-- 2 boinc boinc 213660114 Jun  6 06:58 ATLAS.root_0
[2025-06-06 13:48:03] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:58 start_atlas.sh
[2025-06-06 13:48:03] -rw-r--r-- 2 boinc boinc    508884 Jun  6 06:58 input.tar.gz
[2025-06-06 13:48:03] -rw------- 1 boinc boinc 184622567 Jun  6 13:44 HITS.pool.root.1
[2025-06-06 13:48:03] -rw------- 1 boinc boinc   2795520 Jun  6 13:48 result.tar.gz
13:48:04 (1172267): run_atlas exited; CPU time 32673.646028
13:48:04 (1172267): called boinc_finish(0)

</stderr_txt>
]]>

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