Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:56:55 (1167667): wrapper (7.7.26015): starting
13:56:55 (1167667): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 13:56:55] Arguments: --nthreads 12
[2025-06-05 13:56:55] Threads: 12
[2025-06-05 13:56:55] Checking for CVMFS
[2025-06-05 13:56:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:56:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:56:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:56:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:56:59] 2.12.7.0 16016 3270 62576 146820 1 56 2263721 4096000 912 130560 0 3112300 99.992 789031 146 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 13:56:59] CVMFS is ok
[2025-06-05 13:56:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:56:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 13:56:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 13:56:59] Further information can be found at the LHC@home message board.
[2025-06-05 13:56:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:56:59] Checking for apptainer binary...
[2025-06-05 13:56:59] apptainer is not installed, using version from CVMFS
[2025-06-05 13:56:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:57:01] g3250
[2025-06-05 13:57:01] apptainer works
[2025-06-05 13:57:01] Set ATHENA_PROC_NUMBER=12
[2025-06-05 13:57:01] Set ATHENA_CORE_NUMBER=12
[2025-06-05 13:57:01] Starting ATLAS job with PandaID=6678363763
[2025-06-05 13:57:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:53:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:53:05] 2025-06-05 16:52:48,983 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 16:53:05] 2025-06-05 16:52:48,983 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6678363763/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:53:05] 2025-06-05 16:52:48,983 | INFO     | extracted standard info from prmon json
[2025-06-05 16:53:05] 2025-06-05 16:52:48,984 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:53:05] 2025-06-05 16:52:48,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:53:05] 2025-06-05 16:52:48,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:53:05] 2025-06-05 16:52:48,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:53:05] 2025-06-05 16:52:48,987 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:53:05] 2025-06-05 16:52:48,987 | INFO     | sum of square deviations: 1496659602.520705
[2025-06-05 16:53:05] 2025-06-05 16:52:48,988 | INFO     | sum of deviations: 28623337331.644943
[2025-06-05 16:53:05] 2025-06-05 16:52:48,988 | INFO     | mean x: 1749137164.0532544
[2025-06-05 16:53:05] 2025-06-05 16:52:48,988 | INFO     | mean y: 2612749.3727810653
[2025-06-05 16:53:05] 2025-06-05 16:52:48,989 | INFO     | -- intersect: -33449311122.75596
[2025-06-05 16:53:05] 2025-06-05 16:52:48,989 | INFO     | intersect: -33449311122.75596
[2025-06-05 16:53:05] 2025-06-05 16:52:48,989 | INFO     | chi2: 2.7265587759378143
[2025-06-05 16:53:05] 2025-06-05 16:52:48,989 | INFO     | sum of square deviations: 1367711092.5060978
[2025-06-05 16:53:05] 2025-06-05 16:52:48,990 | INFO     | sum of deviations: 38825570469.92684
[2025-06-05 16:53:05] 2025-06-05 16:52:48,990 | INFO     | mean x: 1749137011.554878
[2025-06-05 16:53:05] 2025-06-05 16:52:48,990 | INFO     | mean y: 2624491.3414634145
[2025-06-05 16:53:05] 2025-06-05 16:52:48,998 | INFO     | -- intersect: -49650582736.25027
[2025-06-05 16:53:05] 2025-06-05 16:52:48,999 | INFO     | intersect: -49650582736.25027
[2025-06-05 16:53:05] 2025-06-05 16:52:48,999 | INFO     | chi2: 2.0281912942741505
[2025-06-05 16:53:05] 2025-06-05 16:52:48,999 | INFO     | current chi2=2.0281912942741505 (change=25.613512821613632 %)
[2025-06-05 16:53:05] 2025-06-05 16:52:48,999 | INFO     | sum of square deviations: 1246390632.490567
[2025-06-05 16:53:05] 2025-06-05 16:52:49,000 | INFO     | sum of deviations: 37431011144.5283
[2025-06-05 16:53:05] 2025-06-05 16:52:49,000 | INFO     | mean x: 1749136859.0566037
[2025-06-05 16:53:05] 2025-06-05 16:52:49,000 | INFO     | mean y: 2622737.830188679
[2025-06-05 16:53:05] 2025-06-05 16:52:49,000 | INFO     | -- intersect: -52526624159.529236
[2025-06-05 16:53:05] 2025-06-05 16:52:49,000 | INFO     | intersect: -52526624159.529236
[2025-06-05 16:53:05] 2025-06-05 16:52:49,001 | INFO     | chi2: 2.029945404920982
[2025-06-05 16:53:05] 2025-06-05 16:52:49,001 | INFO     | current chi2=2.029945404920982 (change=-0.08648644986219073 %)
[2025-06-05 16:53:05] 2025-06-05 16:52:49,001 | INFO     | right removable region: 158
[2025-06-05 16:53:05] 2025-06-05 16:52:49,001 | INFO     | sum of square deviations: 1367705602.5060978
[2025-06-05 16:53:05] 2025-06-05 16:52:49,002 | INFO     | sum of deviations: -6897880961.506098
[2025-06-05 16:53:05] 2025-06-05 16:52:49,002 | INFO     | mean x: 1749137316.554878
[2025-06-05 16:53:05] 2025-06-05 16:52:49,002 | INFO     | mean y: 2654361.4451219514
[2025-06-05 16:53:05] 2025-06-05 16:52:49,002 | INFO     | -- intersect: 8824246502.92351
[2025-06-05 16:53:05] 2025-06-05 16:52:49,006 | INFO     | intersect: 8824246502.92351
[2025-06-05 16:53:05] 2025-06-05 16:52:49,007 | INFO     | chi2: 0.8041416581120573
[2025-06-05 16:53:05] 2025-06-05 16:52:49,007 | INFO     | current chi2=0.8041416581120573 (change=70.50708515038453 %)
[2025-06-05 16:53:05] 2025-06-05 16:52:49,007 | INFO     | sum of square deviations: 1246379652.490567
[2025-06-05 16:53:05] 2025-06-05 16:52:49,008 | INFO     | sum of deviations: -10974460219.811321
[2025-06-05 16:53:05] 2025-06-05 16:52:49,008 | INFO     | mean x: 1749137469.0566037
[2025-06-05 16:53:05] 2025-06-05 16:52:49,008 | INFO     | mean y: 2659442.534591195
[2025-06-05 16:53:05] 2025-06-05 16:52:49,008 | INFO     | -- intersect: 15403937483.928509
[2025-06-05 16:53:05] 2025-06-05 16:52:49,008 | INFO     | intersect: 15403937483.928509
[2025-06-05 16:53:05] 2025-06-05 16:52:49,009 | INFO     | chi2: 0.7760336350625087
[2025-06-05 16:53:05] 2025-06-05 16:52:49,009 | INFO     | current chi2=0.7760336350625087 (change=3.495406905735975 %)
[2025-06-05 16:53:05] 2025-06-05 16:52:49,009 | INFO     | left removable region: 20
[2025-06-05 16:53:05] 2025-06-05 16:52:49,009 | INFO     | sum of square deviations: 814872575.913043
[2025-06-05 16:53:05] 2025-06-05 16:52:49,010 | INFO     | sum of deviations: 1694846981.347826
[2025-06-05 16:53:05] 2025-06-05 16:52:49,010 | INFO     | mean x: 1749137438.5652175
[2025-06-05 16:53:05] 2025-06-05 16:52:49,010 | INFO     | mean y: 2669906.2391304346
[2025-06-05 16:53:05] 2025-06-05 16:52:49,010 | INFO     | -- intersect: -3635347122.856567
[2025-06-05 16:53:05] 2025-06-05 16:52:49,010 | INFO     | intersect: -3635347122.856567
[2025-06-05 16:53:05] 2025-06-05 16:52:49,014 | INFO     | chi2: 0.0012306598267986318
[2025-06-05 16:53:05] 2025-06-05 16:52:49,015 | INFO     | -- intersect: -3635347122.856567
[2025-06-05 16:53:05] 2025-06-05 16:52:49,015 | INFO     | current memory leak: 2.08 B/s (using 138 data points, chi2=0.00)
[2025-06-05 16:53:05] 2025-06-05 16:52:49,015 | INFO     | ..............................
[2025-06-05 16:53:05] 2025-06-05 16:52:49,015 | INFO     | . Timing measurements:
[2025-06-05 16:53:05] 2025-06-05 16:52:49,015 | INFO     | . get job = 0 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,016 | INFO     | . initial setup = 3 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,016 | INFO     | . payload setup = 56 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,016 | INFO     | . stage-in = 0 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,016 | INFO     | . payload execution = 10288 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,016 | INFO     | . stage-out = 1 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,016 | INFO     | . log creation = 0 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,016 | INFO     | ..............................
[2025-06-05 16:53:05] 2025-06-05 16:52:49,104 | INFO     | 
[2025-06-05 16:53:05] 2025-06-05 16:52:49,104 | INFO     | job summary report
[2025-06-05 16:53:05] 2025-06-05 16:52:49,104 | INFO     | --------------------------------------------------
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | PanDA job id: 6678363763
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | task id: 45006595
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | errors: (none)
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | pilot state: finished 
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | transexitcode: 0
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | exeerrorcode: 0
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | exeerrordiag: 
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | exitcode: 0
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | exitmsg: OK
[2025-06-05 16:53:05] 2025-06-05 16:52:49,105 | INFO     | cpuconsumptiontime: 36754 s
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | nevents: 400
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | neventsw: 0
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | pid: 1177744
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | pgrp: 1177744
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | corecount: 12
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | event service: False
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | sizes: {0: 2397194, 1: 2397393, 12: 2397393, 23: 2397421, 30: 2397655, 34: 2397683, 10348: 2426079, 10349: 2426078, 10350: 2435121, 10353: 2435177, 10418: 2435347}
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | --------------------------------------------------
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | 
[2025-06-05 16:53:05] 2025-06-05 16:52:49,106 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 16:53:05] 2025-06-05 16:52:49,283 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:53:05] 2025-06-05 16:52:49,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:53:05] 2025-06-05 16:52:49,285 | INFO     | job 6678363763 has completed (purged errors)
[2025-06-05 16:53:05] 2025-06-05 16:52:49,285 | INFO     | overall cleanup function is called
[2025-06-05 16:53:05] 2025-06-05 16:52:50,298 | INFO     | --- collectZombieJob: --- 10, [1177744]
[2025-06-05 16:53:05] 2025-06-05 16:52:50,299 | INFO     | zombie collector waiting for pid 1177744
[2025-06-05 16:53:05] 2025-06-05 16:52:50,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:53:05] 2025-06-05 16:52:50,299 | INFO     | collected zombie processes
[2025-06-05 16:53:05] 2025-06-05 16:52:50,299 | INFO     | will attempt to kill all subprocesses of pid=1177744
[2025-06-05 16:53:05] 2025-06-05 16:52:50,432 | INFO     | process IDs to be killed: [1177744] (in reverse order)
[2025-06-05 16:53:05] 2025-06-05 16:52:50,515 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:53:05] 2025-06-05 16:52:50,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:53:05] 2025-06-05 16:52:50,517 | INFO     | did not find any defunct processes belonging to 1177744
[2025-06-05 16:53:05] 2025-06-05 16:52:50,527 | INFO     | did not find any defunct processes belonging to 1177744
[2025-06-05 16:53:05] 2025-06-05 16:52:50,527 | INFO     | ready for new job
[2025-06-05 16:53:05] 2025-06-05 16:52:50,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:53:05] 2025-06-05 16:52:50,528 | INFO     | **************************************
[2025-06-05 16:53:05] 2025-06-05 16:52:50,529 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:53:05] 2025-06-05 16:52:50,529 | INFO     | **************************************
[2025-06-05 16:53:05] 2025-06-05 16:52:50,529 | INFO     | 
[2025-06-05 16:53:05] 2025-06-05 16:52:50,529 | INFO     | architecture information:
[2025-06-05 16:53:05] 2025-06-05 16:52:50,534 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:53:05] 2025-06-05 16:52:50,655 | INFO     | cat /etc/os-release:
[2025-06-05 16:53:05] NAME="CentOS Linux"
[2025-06-05 16:53:05] VERSION="7 (Core)"
[2025-06-05 16:53:05] ID="centos"
[2025-06-05 16:53:05] ID_LIKE="rhel fedora"
[2025-06-05 16:53:05] VERSION_ID="7"
[2025-06-05 16:53:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:53:05] ANSI_COLOR="0;31"
[2025-06-05 16:53:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:53:05] HOME_URL="https://www.centos.org/"
[2025-06-05 16:53:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:53:05] 
[2025-06-05 16:53:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:53:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:53:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:53:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:53:05] 
[2025-06-05 16:53:05] 2025-06-05 16:52:50,655 | INFO     | **************************************
[2025-06-05 16:53:05] 2025-06-05 16:52:51,159 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 16:53:05] 2025-06-05 16:52:51,227 | INFO     | sufficient remaining disk space (29950476288 B)
[2025-06-05 16:53:05] 2025-06-05 16:52:51,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:53:05] 2025-06-05 16:52:51,228 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:53:05] 2025-06-05 16:52:51,228 | INFO     | update_server=False
[2025-06-05 16:53:05] 2025-06-05 16:52:51,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:53:05] 2025-06-05 16:52:51,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:53:05] 2025-06-05 16:52:51,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:53:05] 2025-06-05 16:52:51,231 | INFO     | aborting loop
[2025-06-05 16:53:05] 2025-06-05 16:52:51,788 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:53:05] 2025-06-05 16:52:51,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:53:05] 2025-06-05 16:52:51,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:53:05] 2025-06-05 16:52:52,177 | INFO     | all data control threads have been joined
[2025-06-05 16:53:05] 2025-06-05 16:52:52,231 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:52,235 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:52,307 | INFO     | all payload control threads have been joined
[2025-06-05 16:53:05] 2025-06-05 16:52:52,355 | INFO     | [job] validate thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:52,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:52,783 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:52,794 | INFO     | all job control threads have been joined
[2025-06-05 16:53:05] 2025-06-05 16:52:52,863 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,179 | INFO     | [data] control thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,223 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,238 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,314 | INFO     | [payload] control thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,423 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,498 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,798 | INFO     | [job] control thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:53,830 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:54,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:53:05] 2025-06-05 16:52:54,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:53:05] 2025-06-05 16:52:55,134 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:58,294 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:53:05] 2025-06-05 16:52:59,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332705687360)>', '<ExcThread(monitor, started 140332268246784)>']
[2025-06-05 16:53:05] 2025-06-05 16:52:59,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:53:05] 2025-06-05 16:52:59,827 | INFO     | [monitor] control thread has ended
[2025-06-05 16:53:05] 2025-06-05 16:53:04,062 | INFO     | all workflow threads have been joined
[2025-06-05 16:53:05] 2025-06-05 16:53:04,063 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:53:05] 2025-06-05 16:53:04,063 | INFO     | traces error code: 0
[2025-06-05 16:53:05] 2025-06-05 16:53:04,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:53:05] 2025-06-05 16:53:04,347 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:53:05] 2025-06-05 16:53:04,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:53:05] 2025-06-05 16:53:04,411 [wrapper] pilotpid: 1171276
[2025-06-05 16:53:05] 2025-06-05 16:53:04,435 [wrapper] Pilot exit status: 0
[2025-06-05 16:53:05] 2025-06-05 16:53:04,535 [wrapper] pandaids: 6678363763
[2025-06-05 16:53:05] 2025-06-05 16:53:04,603 [wrapper] cleanup supervisor_pilot 1225385 1171277
[2025-06-05 16:53:05] 2025-06-05 16:53:04,623 [wrapper] Test setup, not cleaning
[2025-06-05 16:53:05] 2025-06-05 16:53:04,674 [wrapper] apfmon messages muted
[2025-06-05 16:53:05] 2025-06-05 16:53:04,730 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:53:05] 2025-06-05 16:53:04,751 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:53:05]  *** Error codes and diagnostics ***
[2025-06-05 16:53:05]     "exeErrorCode": 0,
[2025-06-05 16:53:05]     "exeErrorDiag": "",
[2025-06-05 16:53:05]     "pilotErrorCode": 0,
[2025-06-05 16:53:05]     "pilotErrorDiag": "",
[2025-06-05 16:53:05]  *** Listing of results directory ***
[2025-06-05 16:53:05] total 394792
[2025-06-05 16:53:05] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-05 16:53:05] -rwx------ 1 boinc boinc     37140 Jun  4 05:39 runpilot2-wrapper.sh
[2025-06-05 16:53:05] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:39 queuedata.json
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc       100 Jun  5 13:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:53:05] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 13:56 run_atlas
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc       105 Jun  5 13:56 job.xml
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc      9357 Jun  5 13:56 init_data.xml
[2025-06-05 16:53:05] -rw-r--r-- 2 boinc boinc 218110125 Jun  5 13:56 EVNT.45006593._002147.pool.root.1
[2025-06-05 16:53:05] drwxrwx--x 2 boinc boinc      4096 Jun  5 13:56 shared
[2025-06-05 16:53:05] -rw-r--r-- 2 boinc boinc    508882 Jun  5 13:56 input.tar.gz
[2025-06-05 16:53:05] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:56 start_atlas.sh
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc         0 Jun  5 13:56 boinc_lockfile
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 13:57 pandaJob.out
[2025-06-05 16:53:05] -rw------- 1 boinc boinc    983210 Jun  5 13:58 agis_schedconf.cvmfs.json
[2025-06-05 16:53:05] -rw------- 1 boinc boinc   1598969 Jun  5 13:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:53:05] drwx------ 4 boinc boinc      4096 Jun  5 13:58 pilot3
[2025-06-05 16:53:05] -rw------- 1 boinc boinc 179571105 Jun  5 16:50 HITS.45006595._053638.pool.root.1
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc       530 Jun  5 16:50 boinc_task_state.xml
[2025-06-05 16:53:05] -rw------- 1 boinc boinc      1021 Jun  5 16:51 memory_monitor_summary.json
[2025-06-05 16:53:05] -rw------- 1 boinc boinc    403484 Jun  5 16:51 log.45006595._053638.job.log.tgz.1
[2025-06-05 16:53:05] -rw------- 1 boinc boinc        95 Jun  5 16:52 pilot_heartbeat.json
[2025-06-05 16:53:05] -rw------- 1 boinc boinc      7661 Jun  5 16:52 heartbeat.json
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 16:53 boinc_mmap_file
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc        28 Jun  5 16:53 wrapper_checkpoint.txt
[2025-06-05 16:53:05] -rw------- 1 boinc boinc      4376 Jun  5 16:53 pilotlog.txt
[2025-06-05 16:53:05] -rw------- 1 boinc boinc    973778 Jun  5 16:53 log.45006595._053638.job.log.1
[2025-06-05 16:53:05] -rw------- 1 boinc boinc       357 Jun  5 16:53 output.list
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc       620 Jun  5 16:53 runtime_log
[2025-06-05 16:53:05] -rw------- 1 boinc boinc   1392640 Jun  5 16:53 result.tar.gz
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc      8949 Jun  5 16:53 runtime_log.err
[2025-06-05 16:53:05] -rw------- 1 boinc boinc       652 Jun  5 16:53 ckjMDmj1vg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmnaKDmVQxuOo.diag
[2025-06-05 16:53:05] -rw-rw-r-- 1 boinc boinc     21100 Jun  5 16:53 stderr.txt
[2025-06-05 16:53:05] HITS file was successfully produced:
[2025-06-05 16:53:05] -rw------- 1 boinc boinc 179571105 Jun  5 16:50 shared/HITS.pool.root.1
[2025-06-05 16:53:05]  *** Contents of shared directory: ***
[2025-06-05 16:53:05] total 390248
[2025-06-05 16:53:05] -rw-r--r-- 2 boinc boinc 218110125 Jun  5 13:56 ATLAS.root_0
[2025-06-05 16:53:05] -rw-r--r-- 2 boinc boinc    508882 Jun  5 13:56 input.tar.gz
[2025-06-05 16:53:05] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:56 start_atlas.sh
[2025-06-05 16:53:05] -rw------- 1 boinc boinc 179571105 Jun  5 16:50 HITS.pool.root.1
[2025-06-05 16:53:05] -rw------- 1 boinc boinc   1392640 Jun  5 16:53 result.tar.gz
16:53:06 (1167667): run_atlas exited; CPU time 36823.568285
16:53:06 (1167667): called boinc_finish(0)

</stderr_txt>
]]>

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