Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:50:07 (1160628): wrapper (7.7.26015): starting
04:50:07 (1160628): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 04:50:07] Arguments: --nthreads 12
[2025-06-06 04:50:07] Threads: 12
[2025-06-06 04:50:07] Checking for CVMFS
[2025-06-06 04:50:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 04:50:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 04:50:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 04:50:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 04:50:10] 2.12.7.0 14095 4070 61052 146843 3 56 2760684 4096001 912 130560 0 3039986 99.990 1018425 137 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 04:50:10] CVMFS is ok
[2025-06-06 04:50:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 04:50:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 04:50:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 04:50:10] Further information can be found at the LHC@home message board.
[2025-06-06 04:50:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 04:50:10] Checking for apptainer binary...
[2025-06-06 04:50:11] apptainer is not installed, using version from CVMFS
[2025-06-06 04:50:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 04:50:11] g6400
[2025-06-06 04:50:11] apptainer works
[2025-06-06 04:50:12] Set ATHENA_PROC_NUMBER=12
[2025-06-06 04:50:12] Set ATHENA_CORE_NUMBER=12
[2025-06-06 04:50:12] Starting ATLAS job with PandaID=6678285651
[2025-06-06 04:50:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 10:16:22]  *** The last 200 lines of the pilot log: ***
[2025-06-06 10:16:22] 2025-06-06 10:16:06,241 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 10:16:22] 2025-06-06 10:16:06,241 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6678285651/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,241 | INFO     | extracted standard info from prmon json
[2025-06-06 10:16:22] 2025-06-06 10:16:06,241 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 10:16:22] 2025-06-06 10:16:06,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 10:16:22] 2025-06-06 10:16:06,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 10:16:22] 2025-06-06 10:16:06,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 10:16:22] 2025-06-06 10:16:06,249 | INFO     | fitting pss+swap vs Time
[2025-06-06 10:16:22] 2025-06-06 10:16:06,250 | INFO     | sum of square deviations: 9691891126.349222
[2025-06-06 10:16:22] 2025-06-06 10:16:06,251 | INFO     | sum of deviations: 25452651588.68259
[2025-06-06 10:16:22] 2025-06-06 10:16:06,251 | INFO     | mean x: 1749195269.6984127
[2025-06-06 10:16:22] 2025-06-06 10:16:06,251 | INFO     | mean y: 2641188.365079365
[2025-06-06 10:16:22] 2025-06-06 10:16:06,251 | INFO     | -- intersect: -4591060616.555625
[2025-06-06 10:16:22] 2025-06-06 10:16:06,251 | INFO     | intersect: -4591060616.555625
[2025-06-06 10:16:22] 2025-06-06 10:16:06,252 | INFO     | chi2: 3.565930996730698
[2025-06-06 10:16:22] 2025-06-06 10:16:06,252 | INFO     | sum of square deviations: 9237726451.37098
[2025-06-06 10:16:22] 2025-06-06 10:16:06,258 | INFO     | sum of deviations: 67621668228.66134
[2025-06-06 10:16:22] 2025-06-06 10:16:06,258 | INFO     | mean x: 1749195117.2096775
[2025-06-06 10:16:22] 2025-06-06 10:16:06,258 | INFO     | mean y: 2655208.312903226
[2025-06-06 10:16:22] 2025-06-06 10:16:06,258 | INFO     | -- intersect: -12801739087.817465
[2025-06-06 10:16:22] 2025-06-06 10:16:06,258 | INFO     | intersect: -12801739087.817465
[2025-06-06 10:16:22] 2025-06-06 10:16:06,258 | INFO     | chi2: 2.136858425204098
[2025-06-06 10:16:22] 2025-06-06 10:16:06,258 | INFO     | current chi2=2.136858425204098 (change=40.075721398894046 %)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,259 | INFO     | sum of square deviations: 8797961863.750902
[2025-06-06 10:16:22] 2025-06-06 10:16:06,260 | INFO     | sum of deviations: 66330501992.9339
[2025-06-06 10:16:22] 2025-06-06 10:16:06,260 | INFO     | mean x: 1749194964.7180328
[2025-06-06 10:16:22] 2025-06-06 10:16:06,260 | INFO     | mean y: 2654760.5573770492
[2025-06-06 10:16:22] 2025-06-06 10:16:06,260 | INFO     | -- intersect: -13185056426.428104
[2025-06-06 10:16:22] 2025-06-06 10:16:06,260 | INFO     | intersect: -13185056426.428104
[2025-06-06 10:16:22] 2025-06-06 10:16:06,260 | INFO     | chi2: 2.137737705436282
[2025-06-06 10:16:22] 2025-06-06 10:16:06,261 | INFO     | current chi2=2.137737705436282 (change=-0.04114826802809802 %)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,261 | INFO     | right removable region: 304
[2025-06-06 10:16:22] 2025-06-06 10:16:06,265 | INFO     | sum of square deviations: 9237592251.370981
[2025-06-06 10:16:22] 2025-06-06 10:16:06,266 | INFO     | sum of deviations: -39539628671.322586
[2025-06-06 10:16:22] 2025-06-06 10:16:06,267 | INFO     | mean x: 1749195422.2096775
[2025-06-06 10:16:22] 2025-06-06 10:16:06,267 | INFO     | mean y: 2662865.374193548
[2025-06-06 10:16:22] 2025-06-06 10:16:06,267 | INFO     | -- intersect: 7489736941.141431
[2025-06-06 10:16:22] 2025-06-06 10:16:06,267 | INFO     | intersect: 7489736941.141431
[2025-06-06 10:16:22] 2025-06-06 10:16:06,267 | INFO     | chi2: 1.5242596532430408
[2025-06-06 10:16:22] 2025-06-06 10:16:06,267 | INFO     | current chi2=1.5242596532430408 (change=57.2549313309622 %)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,267 | INFO     | sum of square deviations: 8797712251.311474
[2025-06-06 10:16:22] 2025-06-06 10:16:06,273 | INFO     | sum of deviations: -33534891142.590157
[2025-06-06 10:16:22] 2025-06-06 10:16:06,273 | INFO     | mean x: 1749195574.7213116
[2025-06-06 10:16:22] 2025-06-06 10:16:06,273 | INFO     | mean y: 2660781.075409836
[2025-06-06 10:16:22] 2025-06-06 10:16:06,273 | INFO     | -- intersect: 6670199058.044552
[2025-06-06 10:16:22] 2025-06-06 10:16:06,273 | INFO     | intersect: 6670199058.044552
[2025-06-06 10:16:22] 2025-06-06 10:16:06,273 | INFO     | chi2: 1.51561286807666
[2025-06-06 10:16:22] 2025-06-06 10:16:06,274 | INFO     | current chi2=1.51561286807666 (change=0.5672777041617342 %)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,274 | INFO     | left removable region: 20
[2025-06-06 10:16:22] 2025-06-06 10:16:06,274 | INFO     | sum of square deviations: 7102752395.74646
[2025-06-06 10:16:22] 2025-06-06 10:16:06,275 | INFO     | sum of deviations: 22289911968.549282
[2025-06-06 10:16:22] 2025-06-06 10:16:06,275 | INFO     | mean x: 1749195544.2535212
[2025-06-06 10:16:22] 2025-06-06 10:16:06,275 | INFO     | mean y: 2669774.7007042253
[2025-06-06 10:16:22] 2025-06-06 10:16:06,275 | INFO     | -- intersect: -5486669079.4227705
[2025-06-06 10:16:22] 2025-06-06 10:16:06,275 | INFO     | intersect: -5486669079.4227705
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | chi2: 0.003150528474363632
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | -- intersect: -5486669079.4227705
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | current memory leak: 3.14 B/s (using 284 data points, chi2=0.00)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | ..............................
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . Timing measurements:
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . get job = 0 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . initial setup = 5 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . payload setup = 74 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . stage-in = 0 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . payload execution = 19224 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . stage-out = 2 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | . log creation = 0 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,276 | INFO     | ..............................
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | 
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | job summary report
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | --------------------------------------------------
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | PanDA job id: 6678285651
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | task id: 45006595
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | errors: (none)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | pilot state: finished 
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | transexitcode: 0
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | exeerrorcode: 0
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | exeerrordiag: 
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | exitcode: 0
[2025-06-06 10:16:22] 2025-06-06 10:16:06,793 | INFO     | exitmsg: OK
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | cpuconsumptiontime: 25601 s
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | nevents: 400
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | neventsw: 0
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | pid: 1170635
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | pgrp: 1170635
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | corecount: 12
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | event service: False
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | sizes: {0: 2396514, 1: 2397393, 2: 2397421, 12: 2397421, 23: 2397449, 34: 2397477, 42: 2397839, 45: 2397895, 19303: 2430455, 19307: 2439442, 19309: 2439498, 19392:
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | --------------------------------------------------
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | 
[2025-06-06 10:16:22] 2025-06-06 10:16:06,794 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | job 6678285651 has completed (purged errors)
[2025-06-06 10:16:22] 2025-06-06 10:16:06,818 | INFO     | overall cleanup function is called
[2025-06-06 10:16:22] 2025-06-06 10:16:07,829 | INFO     | --- collectZombieJob: --- 10, [1170635]
[2025-06-06 10:16:22] 2025-06-06 10:16:07,829 | INFO     | zombie collector waiting for pid 1170635
[2025-06-06 10:16:22] 2025-06-06 10:16:07,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 10:16:22] 2025-06-06 10:16:07,829 | INFO     | collected zombie processes
[2025-06-06 10:16:22] 2025-06-06 10:16:07,829 | INFO     | will attempt to kill all subprocesses of pid=1170635
[2025-06-06 10:16:22] 2025-06-06 10:16:07,890 | INFO     | process IDs to be killed: [1170635] (in reverse order)
[2025-06-06 10:16:22] 2025-06-06 10:16:07,969 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 10:16:22] 2025-06-06 10:16:07,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 10:16:22] 2025-06-06 10:16:07,970 | INFO     | did not find any defunct processes belonging to 1170635
[2025-06-06 10:16:22] 2025-06-06 10:16:07,971 | INFO     | did not find any defunct processes belonging to 1170635
[2025-06-06 10:16:22] 2025-06-06 10:16:07,971 | INFO     | ready for new job
[2025-06-06 10:16:22] 2025-06-06 10:16:07,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 10:16:22] 2025-06-06 10:16:07,972 | INFO     | **************************************
[2025-06-06 10:16:22] 2025-06-06 10:16:07,973 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 10:16:22] 2025-06-06 10:16:07,973 | INFO     | **************************************
[2025-06-06 10:16:22] 2025-06-06 10:16:07,973 | INFO     | 
[2025-06-06 10:16:22] 2025-06-06 10:16:07,997 | INFO     | architecture information:
[2025-06-06 10:16:22] 2025-06-06 10:16:08,001 | INFO     | executing command: cat /etc/os-release
[2025-06-06 10:16:22] 2025-06-06 10:16:08,025 | INFO     | cat /etc/os-release:
[2025-06-06 10:16:22] NAME="CentOS Linux"
[2025-06-06 10:16:22] VERSION="7 (Core)"
[2025-06-06 10:16:22] ID="centos"
[2025-06-06 10:16:22] ID_LIKE="rhel fedora"
[2025-06-06 10:16:22] VERSION_ID="7"
[2025-06-06 10:16:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 10:16:22] ANSI_COLOR="0;31"
[2025-06-06 10:16:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 10:16:22] HOME_URL="https://www.centos.org/"
[2025-06-06 10:16:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 10:16:22] 
[2025-06-06 10:16:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 10:16:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 10:16:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 10:16:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 10:16:22] 
[2025-06-06 10:16:22] 2025-06-06 10:16:08,025 | INFO     | **************************************
[2025-06-06 10:16:22] 2025-06-06 10:16:08,529 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 10:16:22] 2025-06-06 10:16:08,581 | INFO     | sufficient remaining disk space (201461858304 B)
[2025-06-06 10:16:22] 2025-06-06 10:16:08,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 10:16:22] 2025-06-06 10:16:08,581 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 10:16:22] 2025-06-06 10:16:08,581 | INFO     | update_server=False
[2025-06-06 10:16:22] 2025-06-06 10:16:08,581 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 10:16:22] 2025-06-06 10:16:08,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 10:16:22] 2025-06-06 10:16:08,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:16:22] 2025-06-06 10:16:08,582 | INFO     | aborting loop
[2025-06-06 10:16:22] 2025-06-06 10:16:08,781 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 10:16:22] 2025-06-06 10:16:08,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 10:16:22] 2025-06-06 10:16:08,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 10:16:22] 2025-06-06 10:16:09,033 | INFO     | all job control threads have been joined
[2025-06-06 10:16:22] 2025-06-06 10:16:09,173 | INFO     | all payload control threads have been joined
[2025-06-06 10:16:22] 2025-06-06 10:16:09,409 | INFO     | all data control threads have been joined
[2025-06-06 10:16:22] 2025-06-06 10:16:09,585 | INFO     | [job] retrieve thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:09,585 | INFO     | [job] job monitor thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:09,669 | INFO     | [payload] failed_post thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:09,813 | INFO     | [data] copytool_in thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,037 | INFO     | [job] control thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,181 | INFO     | [payload] control thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,313 | INFO     | [job] validate thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,417 | INFO     | [data] control thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,581 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,585 | INFO     | [data] copytool_out thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,649 | INFO     | [payload] validate_post thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 10:16:22] 2025-06-06 10:16:10,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:10,953 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:11,029 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:11,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:16:22] 2025-06-06 10:16:12,433 | INFO     | [job] queue monitor thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:14,957 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 10:16:22] 2025-06-06 10:16:15,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185302189888)>', '<ExcThread(monitor, started 140184645531392)>']
[2025-06-06 10:16:22] 2025-06-06 10:16:15,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 10:16:22] 2025-06-06 10:16:15,817 | INFO     | [monitor] control thread has ended
[2025-06-06 10:16:22] 2025-06-06 10:16:20,197 | INFO     | all workflow threads have been joined
[2025-06-06 10:16:22] 2025-06-06 10:16:20,197 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 10:16:22] 2025-06-06 10:16:20,197 | INFO     | traces error code: 0
[2025-06-06 10:16:22] 2025-06-06 10:16:20,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 10:16:22] 2025-06-06 10:16:20,993 [wrapper] ==== pilot stdout END ====
[2025-06-06 10:16:22] 2025-06-06 10:16:21,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 10:16:22] 2025-06-06 10:16:21,093 [wrapper] pilotpid: 1164213
[2025-06-06 10:16:22] 2025-06-06 10:16:21,110 [wrapper] Pilot exit status: 0
[2025-06-06 10:16:22] 2025-06-06 10:16:21,189 [wrapper] pandaids: 6678285651
[2025-06-06 10:16:22] 2025-06-06 10:16:21,277 [wrapper] cleanup supervisor_pilot 1239733 1164214
[2025-06-06 10:16:22] 2025-06-06 10:16:21,305 [wrapper] Test setup, not cleaning
[2025-06-06 10:16:22] 2025-06-06 10:16:21,345 [wrapper] apfmon messages muted
[2025-06-06 10:16:22] 2025-06-06 10:16:21,389 [wrapper] ==== wrapper stdout END ====
[2025-06-06 10:16:22] 2025-06-06 10:16:21,433 [wrapper] ==== wrapper stderr END ====
[2025-06-06 10:16:22]  *** Error codes and diagnostics ***
[2025-06-06 10:16:22]     "exeErrorCode": 0,
[2025-06-06 10:16:22]     "exeErrorDiag": "",
[2025-06-06 10:16:22]     "pilotErrorCode": 0,
[2025-06-06 10:16:22]     "pilotErrorDiag": "",
[2025-06-06 10:16:22]  *** Listing of results directory ***
[2025-06-06 10:16:22] total 396344
[2025-06-06 10:16:22] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:52 pilot3.tar.gz
[2025-06-06 10:16:22] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:55 queuedata.json
[2025-06-06 10:16:22] -rwx------ 1 boinc boinc     37140 Jun  4 02:56 runpilot2-wrapper.sh
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc       100 Jun  6 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 10:16:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 04:50 run_atlas
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc       105 Jun  6 04:50 job.xml
[2025-06-06 10:16:22] -rw-r--r-- 2 boinc boinc     15093 Jun  6 04:50 start_atlas.sh
[2025-06-06 10:16:22] drwxrwx--x 2 boinc boinc      4096 Jun  6 04:50 shared
[2025-06-06 10:16:22] -rw-r--r-- 2 boinc boinc    508881 Jun  6 04:50 input.tar.gz
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc      9441 Jun  6 04:50 init_data.xml
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc         0 Jun  6 04:50 boinc_lockfile
[2025-06-06 10:16:22] -rw-r--r-- 2 boinc boinc 218490834 Jun  6 04:50 EVNT.45006593._002038.pool.root.1
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 04:50 pandaJob.out
[2025-06-06 10:16:22] -rw------- 1 boinc boinc    988125 Jun  6 04:51 agis_schedconf.cvmfs.json
[2025-06-06 10:16:22] drwx------ 4 boinc boinc      4096 Jun  6 04:51 pilot3
[2025-06-06 10:16:22] -rw------- 1 boinc boinc 178934291 Jun  6 10:12 HITS.45006595._050860.pool.root.1
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc       530 Jun  6 10:12 boinc_task_state.xml
[2025-06-06 10:16:22] -rw------- 1 boinc boinc      1023 Jun  6 10:14 memory_monitor_summary.json
[2025-06-06 10:16:22] -rw------- 1 boinc boinc   1598969 Jun  6 10:14 agis_ddmendpoints.agis.ALL.json
[2025-06-06 10:16:22] -rw------- 1 boinc boinc    485772 Jun  6 10:14 log.45006595._050860.job.log.tgz.1
[2025-06-06 10:16:22] -rw------- 1 boinc boinc        95 Jun  6 10:15 pilot_heartbeat.json
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 10:15 boinc_mmap_file
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc        28 Jun  6 10:15 wrapper_checkpoint.txt
[2025-06-06 10:16:22] -rw------- 1 boinc boinc      7665 Jun  6 10:16 heartbeat.json
[2025-06-06 10:16:22] -rw------- 1 boinc boinc      4377 Jun  6 10:16 pilotlog.txt
[2025-06-06 10:16:22] -rw------- 1 boinc boinc   1807347 Jun  6 10:16 log.45006595._050860.job.log.1
[2025-06-06 10:16:22] -rw------- 1 boinc boinc       357 Jun  6 10:16 output.list
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc       620 Jun  6 10:16 runtime_log
[2025-06-06 10:16:22] -rw------- 1 boinc boinc   2314240 Jun  6 10:16 result.tar.gz
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc      8957 Jun  6 10:16 runtime_log.err
[2025-06-06 10:16:22] -rw------- 1 boinc boinc       652 Jun  6 10:16 ZDaMDmPUtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3wmKDmF56zOo.diag
[2025-06-06 10:16:22] -rw-rw-r-- 1 boinc boinc     21097 Jun  6 10:16 stderr.txt
[2025-06-06 10:16:22] HITS file was successfully produced:
[2025-06-06 10:16:22] -rw------- 1 boinc boinc 178934291 Jun  6 10:12 shared/HITS.pool.root.1
[2025-06-06 10:16:22]  *** Contents of shared directory: ***
[2025-06-06 10:16:22] total 390900
[2025-06-06 10:16:22] -rw-r--r-- 2 boinc boinc     15093 Jun  6 04:50 start_atlas.sh
[2025-06-06 10:16:22] -rw-r--r-- 2 boinc boinc    508881 Jun  6 04:50 input.tar.gz
[2025-06-06 10:16:22] -rw-r--r-- 2 boinc boinc 218490834 Jun  6 04:50 ATLAS.root_0
[2025-06-06 10:16:22] -rw------- 1 boinc boinc 178934291 Jun  6 10:12 HITS.pool.root.1
[2025-06-06 10:16:22] -rw------- 1 boinc boinc   2314240 Jun  6 10:16 result.tar.gz
10:16:23 (1160628): run_atlas exited; CPU time 25670.430480
10:16:23 (1160628): called boinc_finish(0)

</stderr_txt>
]]>

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