Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-05 07:15:59 (11504): Detected: vboxwrapper 26206
2025-06-05 07:15:59 (11504): Detected: BOINC client v8.0.2
2025-06-05 07:16:00 (11504): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-05 07:16:01 (11504): Successfully copied 'init_data.xml' to the shared directory.
2025-06-05 07:16:01 (11504): Create VM. (boinc_f19a36930b25054c, slot#0)
2025-06-05 07:16:02 (11504): Setting Memory Size for VM. (4800MB)
2025-06-05 07:16:02 (11504): Setting CPU Count for VM. (8)
2025-06-05 07:16:02 (11504): Setting Chipset Options for VM.
2025-06-05 07:16:02 (11504): Setting Graphics Controller Options for VM.
2025-06-05 07:16:03 (11504): Setting Boot Options for VM.
2025-06-05 07:16:03 (11504): Setting Network Configuration for NAT.
2025-06-05 07:16:03 (11504): Enabling VM Network Access.
2025-06-05 07:16:03 (11504): Disabling USB Support for VM.
2025-06-05 07:16:04 (11504): Disabling COM Port Support for VM.
2025-06-05 07:16:04 (11504): Disabling LPT Port Support for VM.
2025-06-05 07:16:04 (11504): Disabling Audio Support for VM.
2025-06-05 07:16:04 (11504): Disabling Clipboard Support for VM.
2025-06-05 07:16:05 (11504): Disabling Drag and Drop Support for VM.
2025-06-05 07:16:05 (11504): Adding storage controller(s) to VM.
2025-06-05 07:16:05 (11504): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-05 07:16:06 (11504): Adding VirtualBox Guest Additions to VM.
2025-06-05 07:16:06 (11504): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-05 07:16:06 (11504): forwarding host port 23838 to guest port 80
2025-06-05 07:16:07 (11504): Enabling remote desktop for VM.
2025-06-05 07:16:07 (11504): Required extension pack not installed, remote desktop not enabled.
2025-06-05 07:16:07 (11504): Enabling shared directory for VM.
2025-06-05 07:16:07 (11504): Starting VM using VBoxManage interface. (boinc_f19a36930b25054c, slot#0)
2025-06-05 07:16:17 (11504): Successfully started VM. (PID = '20844')
2025-06-05 07:16:17 (11504): Reporting VM Process ID to BOINC.
2025-06-05 07:16:17 (11504): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-05 07:16:17 (11504): Guest Log: CPUID EDX: 0x178bfbff
2025-06-05 07:16:17 (11504): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-05 07:16:17 (11504): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-05 07:16:17 (11504): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-05 07:16:17 (11504): Detected: Web Application Enabled (http://localhost:23838)
2025-06-05 07:16:17 (11504): Preference change detected
2025-06-05 07:16:17 (11504): Setting CPU throttle for VM. (25%)
2025-06-05 07:16:17 (11504): Setting checkpoint interval to 10000 seconds. (Higher value of (Preference: 10000 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-05 07:16:19 (11504): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-05 07:16:19 (11504): Guest Log: BIOS: Booting from Hard Disk...
2025-06-05 07:16:28 (11504): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-05 07:16:28 (11504): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-05 07:16:28 (11504): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-05 07:16:45 (11504): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-05 07:16:45 (11504): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-05 07:17:07 (11504): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.000197 main     Log opened 2025-06-05T07:17:05.463863000Z
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.000513 main     OS Product: Linux
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.000674 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.000768 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.000861 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.000864 main     Process ID: 1385
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.000866 main     Package type: LINUX_64BITS_GENERIC
2025-06-05 07:17:07 (11504): Guest Log: 00:00:00.002829 main     5.2.32 r132073 started. Verbose level = 0
2025-06-05 07:17:07 (11504): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-05 07:17:07 (11504): Guest Log: [INFO] Mounting shared directory
2025-06-05 07:17:07 (11504): Guest Log: [INFO] Checking for init_data.xml
2025-06-05 07:17:15 (11504): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-05 07:17:15 (11504): Guest Log: [INFO] Detected branch: prod
2025-06-05 07:17:15 (11504): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-05 07:17:15 (11504): Guest Log: Copying input files
2025-06-05 07:17:17 (11504): Guest Log: 00:00:10.007154 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 220 601 000ns (GuestNow=1 749 129 436 690 172 000 ns GuestLast=1 749 107 825 469 571 000 ns fSetTimeLastLoop=true )
2025-06-05 07:17:20 (11504): Guest Log: Copied input files into RunAtlas.
2025-06-05 07:17:21 (11504): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-05 07:17:21 (11504): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-05 07:17:21 (11504): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-05 07:17:21 (11504): Guest Log: Further information can be found at the LHC@home message board.
2025-06-05 07:17:33 (11504): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-05 07:17:33 (11504): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-05 07:17:33 (11504): Guest Log: 2.6.3.0 1668 0 32192 146820 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-05 07:17:35 (11504): Guest Log: copied the webapp to /var/www
2025-06-05 07:17:35 (11504): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-05 07:17:35 (11504): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-05 07:17:35 (11504): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-05 07:17:35 (11504): Guest Log:  *** Starting ATLAS job. (PandaID=6678363702 taskID=45006595) ***
2025-06-05 08:32:11 (11504): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 08:32:31 (11504): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 08:56:44 (11504): Status Report: Elapsed Time: '6000.000000'
2025-06-05 08:56:44 (11504): Status Report: CPU Time: '8302.765625'
2025-06-05 10:36:50 (11504): Status Report: Elapsed Time: '12000.000000'
2025-06-05 10:36:50 (11504): Status Report: CPU Time: '22516.500000'
2025-06-05 12:16:55 (11504): Status Report: Elapsed Time: '18000.000000'
2025-06-05 12:16:55 (11504): Status Report: CPU Time: '36758.328125'
2025-06-05 12:38:50 (11504): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 12:39:10 (11504): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 12:53:53 (11504): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 12:54:13 (11504): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 13:22:58 (11504): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 13:23:19 (11504): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 13:58:04 (11504): Status Report: Elapsed Time: '24000.000000'
2025-06-05 13:58:04 (11504): Status Report: CPU Time: '50886.625000'
2025-06-05 15:38:06 (11504): Status Report: Elapsed Time: '30000.000000'
2025-06-05 15:38:06 (11504): Status Report: CPU Time: '65064.828125'
2025-06-05 17:04:10 (11504): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 17:04:31 (11504): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 17:18:31 (11504): Status Report: Elapsed Time: '36000.000000'
2025-06-05 17:18:31 (11504): Status Report: CPU Time: '76788.625000'
2025-06-05 17:18:59 (11504): Guest Log:  *** Job finished ***
2025-06-05 17:18:59 (11504): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:21,178 | INFO     | [data] copytool_out thread has finished
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:21,950 | INFO     | [job] queue monitor thread has finished
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:23,922 | INFO     | [data] queue_monitor thread has finished
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:24,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003105990464)>', '<ExcThread(monitor, started 140002293962496)>']
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:24,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:24,924 | INFO     | [monitor] control thread has ended
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:29,917 | INFO     | all workflow threads have been joined
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:29,918 | INFO     | end of generic workflow (traces error code: 0)
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:29,918 | INFO     | traces error code: 0
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:29,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,226 [wrapper] ==== pilot stdout END ====
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,236 [wrapper] ==== wrapper stdout RESUME ====
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,245 [wrapper] pilotpid: 6020
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,254 [wrapper] Pilot exit status: 0
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,358 [wrapper] pandaids: 6678363702
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,432 [wrapper] cleanup supervisor_pilot 32354 6021
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,443 [wrapper] Test setup, not cleaning
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,453 [wrapper] apfmon messages muted
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,463 [wrapper] ==== wrapper stdout END ====
2025-06-05 17:18:59 (11504): Guest Log: 2025-06-05 23:17:30,473 [wrapper] ==== wrapper stderr END ====
2025-06-05 17:18:59 (11504): Guest Log:  *** Error codes and diagnostics ***
2025-06-05 17:18:59 (11504): Guest Log:     "exeErrorCode": 0,
2025-06-05 17:18:59 (11504): Guest Log:     "exeErrorDiag": "",
2025-06-05 17:18:59 (11504): Guest Log:     "pilotErrorCode": 0,
2025-06-05 17:18:59 (11504): Guest Log:     "pilotErrorDiag": "",
2025-06-05 17:18:59 (11504): Guest Log:  *** Listing of results directory ***
2025-06-05 17:18:59 (11504): Guest Log: total 181824
2025-06-05 17:18:59 (11504): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:58 pilot3.tar.gz
2025-06-05 17:18:59 (11504): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 05:31 runpilot2-wrapper.sh
2025-06-05 17:18:59 (11504): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 05:31 queuedata.json
2025-06-05 17:18:59 (11504): Guest Log: -rwxr-xr-x. 1 atlas atlas      9043 Jun  5 13:17 init_data.xml
2025-06-05 17:18:59 (11504): Guest Log: -rwxr-xr-x. 1 atlas atlas    508882 Jun  5 13:17 input.tar.gz
2025-06-05 17:18:59 (11504): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  5 13:17 start_atlas.sh
2025-06-05 17:18:59 (11504): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 13:17 EVNT.45006593._002144.pool.root.1 -> /data/./ATLAS.root_0
2025-06-05 17:18:59 (11504): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  5 13:17 pandaJob.out
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas    983210 Jun  5 13:19 agis_schedconf.cvmfs.json
2025-06-05 17:18:59 (11504): Guest Log: drwx------. 4 atlas atlas      4096 Jun  5 13:19 pilot3
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas 177686914 Jun  5 23:13 HITS.45006595._053577.pool.root.1
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas        95 Jun  5 23:16 pilot_heartbeat.json
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  5 23:16 memory_monitor_summary.json
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 23:16 agis_ddmendpoints.agis.ALL.json
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas    501087 Jun  5 23:16 log.45006595._053577.job.log.tgz.1
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas      7732 Jun  5 23:17 heartbeat.json
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas      4599 Jun  5 23:17 pilotlog.txt
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas   1864136 Jun  5 23:17 log.45006595._053577.job.log.1
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 23:17 output.list
2025-06-05 17:18:59 (11504): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 23:17 runtime_log
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas   2385920 Jun  5 23:17 result.tar.gz
2025-06-05 17:18:59 (11504): Guest Log: -rw-r--r--. 1 atlas atlas      8623 Jun  5 23:17 runtime_log.err
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas       670 Jun  5 23:17 4hJKDmctvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCPnKDmzDg3Mo.diag
2025-06-05 17:18:59 (11504): Guest Log: Looking for outputfile HITS.45006595._053577.pool.root.1
2025-06-05 17:18:59 (11504): Guest Log: HITS file was successfully produced
2025-06-05 17:18:59 (11504): Guest Log: -rw-------. 1 atlas atlas 177686914 Jun  5 23:13 /home/atlas/RunAtlas/HITS.45006595._053577.pool.root.1
2025-06-05 17:19:02 (11504): Guest Log: Successfully finished the ATLAS job!
2025-06-05 17:19:02 (11504): Guest Log: Copying the results back to the shared directory!
2025-06-05 17:19:02 (11504): Guest Log:  *** Contents of shared directory: ***
2025-06-05 17:19:02 (11504): Guest Log: total 386104
2025-06-05 17:19:02 (11504): Guest Log: -rwxrwxrwx. 1 root root 214750948 Jun  5 13:15 ATLAS.root_0
2025-06-05 17:19:02 (11504): Guest Log: -rwxrwxrwx. 1 root root 177686914 Jun  5  2025 HITS.pool.root.1
2025-06-05 17:19:02 (11504): Guest Log: -rwxrwxrwx. 1 root root      9043 Jun  5 13:15 init_data.xml
2025-06-05 17:19:02 (11504): Guest Log: -rwxrwxrwx. 1 root root    508882 Jun  4 10:31 input.tar.gz
2025-06-05 17:19:02 (11504): Guest Log: -rwxrwxrwx. 1 root root   2385920 Jun  5  2025 result.tar.gz
2025-06-05 17:19:02 (11504): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 10:31 start_atlas.sh
2025-06-05 17:19:02 (11504): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-05 17:19:02 (11504): VM Completion File Detected.
2025-06-05 17:19:02 (11504): Powering off VM.
2025-06-05 17:19:03 (11504): Successfully stopped VM.
2025-06-05 17:19:03 (11504): Deregistering VM. (boinc_f19a36930b25054c, slot#0)
2025-06-05 17:19:03 (11504): Removing network bandwidth throttle group from VM.
2025-06-05 17:19:03 (11504): Removing VM from VirtualBox.
17:19:08 (11504): called boinc_finish(0)

</stderr_txt>
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