Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-05 13:23:18 (31264): Detected: vboxwrapper 26206
2025-06-05 13:23:18 (31264): Detected: BOINC client v8.0.2
2025-06-05 13:23:19 (31264): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-05 13:23:19 (31264): Successfully copied 'init_data.xml' to the shared directory.
2025-06-05 13:23:20 (31264): Create VM. (boinc_dd51558b2cc5b518, slot#2)
2025-06-05 13:23:20 (31264): Setting Memory Size for VM. (4800MB)
2025-06-05 13:23:20 (31264): Setting CPU Count for VM. (8)
2025-06-05 13:23:21 (31264): Setting Chipset Options for VM.
2025-06-05 13:23:21 (31264): Setting Graphics Controller Options for VM.
2025-06-05 13:23:21 (31264): Setting Boot Options for VM.
2025-06-05 13:23:21 (31264): Setting Network Configuration for NAT.
2025-06-05 13:23:22 (31264): Enabling VM Network Access.
2025-06-05 13:23:22 (31264): Disabling USB Support for VM.
2025-06-05 13:23:22 (31264): Disabling COM Port Support for VM.
2025-06-05 13:23:23 (31264): Disabling LPT Port Support for VM.
2025-06-05 13:23:23 (31264): Disabling Audio Support for VM.
2025-06-05 13:23:23 (31264): Disabling Clipboard Support for VM.
2025-06-05 13:23:23 (31264): Disabling Drag and Drop Support for VM.
2025-06-05 13:23:24 (31264): Adding storage controller(s) to VM.
2025-06-05 13:23:24 (31264): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-05 13:23:24 (31264): Adding VirtualBox Guest Additions to VM.
2025-06-05 13:23:25 (31264): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-05 13:23:25 (31264): forwarding host port 27807 to guest port 80
2025-06-05 13:23:25 (31264): Enabling remote desktop for VM.
2025-06-05 13:23:25 (31264): Required extension pack not installed, remote desktop not enabled.
2025-06-05 13:23:25 (31264): Enabling shared directory for VM.
2025-06-05 13:23:26 (31264): Starting VM using VBoxManage interface. (boinc_dd51558b2cc5b518, slot#2)
2025-06-05 13:23:36 (31264): Successfully started VM. (PID = '22012')
2025-06-05 13:23:36 (31264): Reporting VM Process ID to BOINC.
2025-06-05 13:23:36 (31264): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-05 13:23:36 (31264): Guest Log: CPUID EDX: 0x178bfbff
2025-06-05 13:23:36 (31264): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-05 13:23:36 (31264): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-05 13:23:36 (31264): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-05 13:23:36 (31264): Detected: Web Application Enabled (http://localhost:27807)
2025-06-05 13:23:36 (31264): Preference change detected
2025-06-05 13:23:36 (31264): Setting CPU throttle for VM. (25%)
2025-06-05 13:23:36 (31264): Setting checkpoint interval to 10000 seconds. (Higher value of (Preference: 10000 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-05 13:23:38 (31264): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-05 13:23:38 (31264): Guest Log: BIOS: Booting from Hard Disk...
2025-06-05 13:23:47 (31264): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-05 13:23:47 (31264): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-05 13:23:47 (31264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-05 13:24:00 (31264): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-05 13:24:00 (31264): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-05 13:24:23 (31264): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.000193 main     Log opened 2025-06-05T13:24:21.256241000Z
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.000436 main     OS Product: Linux
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.000534 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.000622 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.000711 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.000714 main     Process ID: 1368
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.000716 main     Package type: LINUX_64BITS_GENERIC
2025-06-05 13:24:23 (31264): Guest Log: 00:00:00.002693 main     5.2.32 r132073 started. Verbose level = 0
2025-06-05 13:24:23 (31264): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-05 13:24:23 (31264): Guest Log: [INFO] Mounting shared directory
2025-06-05 13:24:23 (31264): Guest Log: [INFO] Checking for init_data.xml
2025-06-05 13:24:31 (31264): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-05 13:24:31 (31264): Guest Log: [INFO] Detected branch: prod
2025-06-05 13:24:31 (31264): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-05 13:24:31 (31264): Guest Log: Copying input files
2025-06-05 13:24:33 (31264): Guest Log: 00:00:10.007072 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 174 238 000ns (GuestNow=1 749 151 472 435 606 000 ns GuestLast=1 749 129 861 261 368 000 ns fSetTimeLastLoop=true )
2025-06-05 13:24:36 (31264): Guest Log: Copied input files into RunAtlas.
2025-06-05 13:24:36 (31264): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-05 13:24:36 (31264): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-05 13:24:36 (31264): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-05 13:24:36 (31264): Guest Log: Further information can be found at the LHC@home message board.
2025-06-05 13:24:47 (31264): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-05 13:24:47 (31264): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-05 13:24:47 (31264): Guest Log: 2.6.3.0 1650 0 29992 146830 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-05 13:24:49 (31264): Guest Log: copied the webapp to /var/www
2025-06-05 13:24:49 (31264): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-05 13:24:49 (31264): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-05 13:24:49 (31264): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-05 13:24:49 (31264): Guest Log:  *** Starting ATLAS job. (PandaID=6678363294 taskID=45006595) ***
2025-06-05 15:03:39 (31264): Status Report: Elapsed Time: '6000.000000'
2025-06-05 15:03:39 (31264): Status Report: CPU Time: '7498.109375'
2025-06-05 16:10:32 (31264): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 17:04:31 (31264): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 17:04:34 (31264): Guest Log: 02:46:13.278559 timesync vgsvcTimeSyncWorker: Radical host time change: 3 249 173 000 000ns (HostNow=1 749 164 674 839 000 000 ns HostLast=1 749 161 425 666 000 000 ns)
2025-06-05 17:04:44 (31264): Guest Log: 02:46:23.282177 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 249 137 176 000ns (GuestNow=1 749 164 684 843 208 000 ns GuestLast=1 749 161 435 706 032 000 ns fSetTimeLastLoop=true )
2025-06-05 17:19:15 (31264): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 17:19:35 (31264): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 17:38:02 (31264): Status Report: Elapsed Time: '12000.000000'
2025-06-05 17:38:02 (31264): Status Report: CPU Time: '21554.328125'
2025-06-05 17:58:51 (31264): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 17:59:11 (31264): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 19:18:25 (31264): Status Report: Elapsed Time: '18000.000000'
2025-06-05 19:18:25 (31264): Status Report: CPU Time: '35705.140625'
2025-06-05 20:58:26 (31264): Status Report: Elapsed Time: '24000.000000'
2025-06-05 20:58:26 (31264): Status Report: CPU Time: '50126.500000'
2025-06-05 22:38:28 (31264): Status Report: Elapsed Time: '30000.000000'
2025-06-05 22:38:28 (31264): Status Report: CPU Time: '64453.843750'
2025-06-06 00:18:29 (31264): Status Report: Elapsed Time: '36000.000000'
2025-06-06 00:18:29 (31264): Status Report: CPU Time: '78879.718750'
2025-06-06 01:48:28 (31264): Guest Log:  *** Job finished ***
2025-06-06 01:48:28 (31264): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:47:53,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:47:54,392 | INFO     | [job] queue monitor thread has finished
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:47:55,993 | INFO     | [data] queue_monitor thread has finished
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:47:56,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139948524980032)>', '<ExcThread(monitor, started 139947944175360)>']
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:47:56,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:47:56,788 | INFO     | [monitor] control thread has ended
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,193 | INFO     | all workflow threads have been joined
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,194 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,194 | INFO     | traces error code: 0
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,584 [wrapper] ==== pilot stdout END ====
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,594 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,602 [wrapper] pilotpid: 6015
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,612 [wrapper] Pilot exit status: 0
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:01,968 [wrapper] pandaids: 6678363294
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:02,111 [wrapper] cleanup supervisor_pilot  6934 6016
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:02,131 [wrapper] Test setup, not cleaning
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:02,146 [wrapper] apfmon messages muted
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:02,158 [wrapper] ==== wrapper stdout END ====
2025-06-06 01:48:28 (31264): Guest Log: 2025-06-06 07:48:02,170 [wrapper] ==== wrapper stderr END ====
2025-06-06 01:48:28 (31264): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 01:48:28 (31264): Guest Log:     "exeErrorCode": 0,
2025-06-06 01:48:28 (31264): Guest Log:     "exeErrorDiag": "",
2025-06-06 01:48:28 (31264): Guest Log:     "pilotErrorCode": 0,
2025-06-06 01:48:28 (31264): Guest Log:     "pilotErrorDiag": "",
2025-06-06 01:48:28 (31264): Guest Log:  *** Listing of results directory ***
2025-06-06 01:48:28 (31264): Guest Log: total 184028
2025-06-06 01:48:28 (31264): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:58 pilot3.tar.gz
2025-06-06 01:48:28 (31264): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 05:19 queuedata.json
2025-06-06 01:48:28 (31264): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 05:20 runpilot2-wrapper.sh
2025-06-06 01:48:28 (31264): Guest Log: -rwxr-xr-x. 1 atlas atlas      9043 Jun  5 19:24 init_data.xml
2025-06-06 01:48:28 (31264): Guest Log: -rwxr-xr-x. 1 atlas atlas    508883 Jun  5 19:24 input.tar.gz
2025-06-06 01:48:28 (31264): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  5 19:24 start_atlas.sh
2025-06-06 01:48:28 (31264): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 19:24 EVNT.45006593._002135.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 01:48:28 (31264): Guest Log: -rw-r--r--. 1 atlas atlas      2522 Jun  5 19:24 pandaJob.out
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas    987599 Jun  5 19:26 agis_schedconf.cvmfs.json
2025-06-06 01:48:28 (31264): Guest Log: drwx------. 4 atlas atlas      4096 Jun  5 19:27 pilot3
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas 179360310 Jun  6 07:44 HITS.45006595._053334.pool.root.1
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  6 07:46 memory_monitor_summary.json
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 07:47 agis_ddmendpoints.agis.ALL.json
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas    513609 Jun  6 07:47 log.45006595._053334.job.log.tgz.1
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas        97 Jun  6 07:47 pilot_heartbeat.json
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas      7732 Jun  6 07:47 heartbeat.json
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  6 07:48 pilotlog.txt
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas   2144123 Jun  6 07:48 log.45006595._053334.job.log.1
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 07:48 output.list
2025-06-06 01:48:28 (31264): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 07:48 runtime_log
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas   2672640 Jun  6 07:48 result.tar.gz
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas       670 Jun  6 07:48 XzYKDmgjvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6MnKDmTwTedn.diag
2025-06-06 01:48:28 (31264): Guest Log: -rw-r--r--. 1 atlas atlas      8623 Jun  6 07:48 runtime_log.err
2025-06-06 01:48:28 (31264): Guest Log: Looking for outputfile HITS.45006595._053334.pool.root.1
2025-06-06 01:48:28 (31264): Guest Log: HITS file was successfully produced
2025-06-06 01:48:28 (31264): Guest Log: -rw-------. 1 atlas atlas 179360310 Jun  6 07:44 /home/atlas/RunAtlas/HITS.45006595._053334.pool.root.1
2025-06-06 01:48:32 (31264): Guest Log: Successfully finished the ATLAS job!
2025-06-06 01:48:32 (31264): Guest Log: Copying the results back to the shared directory!
2025-06-06 01:48:32 (31264): Guest Log:  *** Contents of shared directory: ***
2025-06-06 01:48:32 (31264): Guest Log: total 389912
2025-06-06 01:48:32 (31264): Guest Log: -rwxrwxrwx. 1 root root 216690560 Jun  5 19:23 ATLAS.root_0
2025-06-06 01:48:32 (31264): Guest Log: -rwxrwxrwx. 1 root root 179360310 Jun  6  2025 HITS.pool.root.1
2025-06-06 01:48:32 (31264): Guest Log: -rwxrwxrwx. 1 root root      9043 Jun  5 19:23 init_data.xml
2025-06-06 01:48:32 (31264): Guest Log: -rwxrwxrwx. 1 root root    508883 Jun  4 10:31 input.tar.gz
2025-06-06 01:48:32 (31264): Guest Log: -rwxrwxrwx. 1 root root   2672640 Jun  6  2025 result.tar.gz
2025-06-06 01:48:32 (31264): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 10:31 start_atlas.sh
2025-06-06 01:48:32 (31264): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 01:48:32 (31264): VM Completion File Detected.
2025-06-06 01:48:32 (31264): Powering off VM.
2025-06-06 01:48:32 (31264): Successfully stopped VM.
2025-06-06 01:48:32 (31264): Deregistering VM. (boinc_dd51558b2cc5b518, slot#2)
2025-06-06 01:48:33 (31264): Removing network bandwidth throttle group from VM.
2025-06-06 01:48:33 (31264): Removing VM from VirtualBox.
01:48:38 (31264): called boinc_finish(0)

</stderr_txt>
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