Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 05:36:42 (41732): Detected: vboxwrapper 26206
2025-06-06 05:36:42 (41732): Detected: BOINC client v8.0.2
2025-06-06 05:36:43 (41732): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-06 05:36:44 (41732): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 05:36:44 (41732): Create VM. (boinc_7790c429dde5c8be, slot#0)
2025-06-06 05:36:45 (41732): Setting Memory Size for VM. (4800MB)
2025-06-06 05:36:45 (41732): Setting CPU Count for VM. (8)
2025-06-06 05:36:45 (41732): Setting Chipset Options for VM.
2025-06-06 05:36:45 (41732): Setting Graphics Controller Options for VM.
2025-06-06 05:36:46 (41732): Setting Boot Options for VM.
2025-06-06 05:36:46 (41732): Setting Network Configuration for NAT.
2025-06-06 05:36:46 (41732): Enabling VM Network Access.
2025-06-06 05:36:46 (41732): Disabling USB Support for VM.
2025-06-06 05:36:47 (41732): Disabling COM Port Support for VM.
2025-06-06 05:36:47 (41732): Disabling LPT Port Support for VM.
2025-06-06 05:36:47 (41732): Disabling Audio Support for VM.
2025-06-06 05:36:47 (41732): Disabling Clipboard Support for VM.
2025-06-06 05:36:48 (41732): Disabling Drag and Drop Support for VM.
2025-06-06 05:36:48 (41732): Adding storage controller(s) to VM.
2025-06-06 05:36:48 (41732): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 05:36:49 (41732): Adding VirtualBox Guest Additions to VM.
2025-06-06 05:36:49 (41732): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 05:36:49 (41732): forwarding host port 39160 to guest port 80
2025-06-06 05:36:50 (41732): Enabling remote desktop for VM.
2025-06-06 05:36:50 (41732): Required extension pack not installed, remote desktop not enabled.
2025-06-06 05:36:50 (41732): Enabling shared directory for VM.
2025-06-06 05:36:50 (41732): Starting VM using VBoxManage interface. (boinc_7790c429dde5c8be, slot#0)
2025-06-06 05:37:00 (41732): Successfully started VM. (PID = '4988')
2025-06-06 05:37:00 (41732): Reporting VM Process ID to BOINC.
2025-06-06 05:37:00 (41732): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-06 05:37:00 (41732): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 05:37:00 (41732): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-06 05:37:00 (41732): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 05:37:00 (41732): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 05:37:00 (41732): Detected: Web Application Enabled (http://localhost:39160)
2025-06-06 05:37:00 (41732): Preference change detected
2025-06-06 05:37:00 (41732): Setting CPU throttle for VM. (25%)
2025-06-06 05:37:00 (41732): Setting checkpoint interval to 10000 seconds. (Higher value of (Preference: 10000 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 05:37:02 (41732): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 05:37:02 (41732): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 05:37:11 (41732): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 05:37:11 (41732): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 05:37:11 (41732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 05:37:29 (41732): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 05:37:29 (41732): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 05:37:51 (41732): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.000260 main     Log opened 2025-06-06T05:37:49.301739000Z
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.000575 main     OS Product: Linux
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.000674 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.000764 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.000854 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.000856 main     Process ID: 1367
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.000858 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 05:37:51 (41732): Guest Log: 00:00:00.002750 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 05:37:51 (41732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 05:37:51 (41732): Guest Log: [INFO] Mounting shared directory
2025-06-06 05:37:51 (41732): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 05:38:01 (41732): Guest Log: 00:00:10.060122 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 918 007 000ns (GuestNow=1 749 209 881 224 770 000 ns GuestLast=1 749 188 269 306 763 000 ns fSetTimeLastLoop=true )
2025-06-06 05:38:02 (41732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 05:38:02 (41732): Guest Log: [INFO] Detected branch: prod
2025-06-06 05:38:03 (41732): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 05:38:03 (41732): Guest Log: Copying input files
2025-06-06 05:38:08 (41732): Guest Log: Copied input files into RunAtlas.
2025-06-06 05:38:08 (41732): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 05:38:08 (41732): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 05:38:08 (41732): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 05:38:08 (41732): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 05:38:19 (41732): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 05:38:20 (41732): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 05:38:20 (41732): Guest Log: 2.6.3.0 1652 0 32040 146855 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 05:38:21 (41732): Guest Log: copied the webapp to /var/www
2025-06-06 05:38:21 (41732): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-06 05:38:21 (41732): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-06 05:38:21 (41732): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 05:38:21 (41732): Guest Log:  *** Starting ATLAS job. (PandaID=6678363738 taskID=45006595) ***
2025-06-06 06:01:08 (41732): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 06:01:29 (41732): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 07:17:25 (41732): Status Report: Elapsed Time: '6000.000000'
2025-06-06 07:17:25 (41732): Status Report: CPU Time: '7533.000000'
2025-06-06 08:57:27 (41732): Status Report: Elapsed Time: '12000.000000'
2025-06-06 08:57:27 (41732): Status Report: CPU Time: '21781.125000'
2025-06-06 10:13:55 (41732): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 10:14:15 (41732): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 10:37:30 (41732): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 10:37:51 (41732): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 10:38:13 (41732): Status Report: Elapsed Time: '18000.000000'
2025-06-06 10:38:13 (41732): Status Report: CPU Time: '36035.687500'
2025-06-06 11:35:14 (41732): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 11:35:35 (41732): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 12:18:37 (41732): Status Report: Elapsed Time: '24000.000000'
2025-06-06 12:18:37 (41732): Status Report: CPU Time: '50165.687500'
2025-06-06 13:18:55 (41732): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 13:19:15 (41732): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 13:59:00 (41732): Status Report: Elapsed Time: '30000.000000'
2025-06-06 13:59:00 (41732): Status Report: CPU Time: '64494.687500'
2025-06-06 14:13:49 (41732): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 14:14:09 (41732): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 14:19:20 (41732): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 14:19:40 (41732): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 15:39:47 (41732): Status Report: Elapsed Time: '36000.000000'
2025-06-06 15:39:47 (41732): Status Report: CPU Time: '78791.921875'
2025-06-06 16:46:39 (41732): Guest Log:  *** Job finished ***
2025-06-06 16:46:39 (41732): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:26,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:27,121 | INFO     | [job] queue monitor thread has finished
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:27,622 | INFO     | [data] queue_monitor thread has finished
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:28,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475445237568)>', '<ExcThread(monitor, started 140474547431168)>']
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:29,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:29,682 | INFO     | [monitor] control thread has ended
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:33,856 | INFO     | all workflow threads have been joined
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:33,856 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:33,857 | INFO     | traces error code: 0
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:33,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:34,416 [wrapper] ==== pilot stdout END ====
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:34,425 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:34,434 [wrapper] pilotpid: 6019
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:34,444 [wrapper] Pilot exit status: 0
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:34,915 [wrapper] pandaids: 6678363738
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:34,987 [wrapper] cleanup supervisor_pilot  4201 6020
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:34,997 [wrapper] Test setup, not cleaning
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:35,008 [wrapper] apfmon messages muted
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:35,019 [wrapper] ==== wrapper stdout END ====
2025-06-06 16:46:39 (41732): Guest Log: 2025-06-06 22:44:35,028 [wrapper] ==== wrapper stderr END ====
2025-06-06 16:46:39 (41732): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 16:46:39 (41732): Guest Log:     "exeErrorCode": 0,
2025-06-06 16:46:39 (41732): Guest Log:     "exeErrorDiag": "",
2025-06-06 16:46:39 (41732): Guest Log:     "pilotErrorCode": 0,
2025-06-06 16:46:39 (41732): Guest Log:     "pilotErrorDiag": "",
2025-06-06 16:46:39 (41732): Guest Log:  *** Listing of results directory ***
2025-06-06 16:46:39 (41732): Guest Log: total 186024
2025-06-06 16:46:39 (41732): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:58 pilot3.tar.gz
2025-06-06 16:46:39 (41732): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 05:31 runpilot2-wrapper.sh
2025-06-06 16:46:39 (41732): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 05:31 queuedata.json
2025-06-06 16:46:39 (41732): Guest Log: -rwxr-xr-x. 1 atlas atlas      9043 Jun  6 11:38 init_data.xml
2025-06-06 16:46:39 (41732): Guest Log: -rwxr-xr-x. 1 atlas atlas    508878 Jun  6 11:38 input.tar.gz
2025-06-06 16:46:39 (41732): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 11:38 start_atlas.sh
2025-06-06 16:46:39 (41732): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 11:38 EVNT.45006593._002146.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 16:46:39 (41732): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  6 11:38 pandaJob.out
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas    985732 Jun  6 11:39 agis_schedconf.cvmfs.json
2025-06-06 16:46:39 (41732): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 11:40 pilot3
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas 181576402 Jun  6 22:40 HITS.45006595._053613.pool.root.1
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas      1029 Jun  6 22:43 memory_monitor_summary.json
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 22:43 agis_ddmendpoints.agis.ALL.json
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas    509525 Jun  6 22:43 log.45006595._053613.job.log.tgz.1
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 22:44 pilot_heartbeat.json
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas      7733 Jun  6 22:44 heartbeat.json
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  6 22:44 pilotlog.txt
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas   2061414 Jun  6 22:44 log.45006595._053613.job.log.1
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 22:44 output.list
2025-06-06 16:46:39 (41732): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 22:44 runtime_log
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas   2590720 Jun  6 22:44 result.tar.gz
2025-06-06 16:46:39 (41732): Guest Log: -rw-r--r--. 1 atlas atlas      8623 Jun  6 22:44 runtime_log.err
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas       670 Jun  6 22:44 ceALDmctvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkPnKDmbRcigm.diag
2025-06-06 16:46:39 (41732): Guest Log: Looking for outputfile HITS.45006595._053613.pool.root.1
2025-06-06 16:46:39 (41732): Guest Log: HITS file was successfully produced
2025-06-06 16:46:39 (41732): Guest Log: -rw-------. 1 atlas atlas 181576402 Jun  6 22:40 /home/atlas/RunAtlas/HITS.45006595._053613.pool.root.1
2025-06-06 16:46:42 (41732): Guest Log: Successfully finished the ATLAS job!
2025-06-06 16:46:42 (41732): Guest Log: Copying the results back to the shared directory!
2025-06-06 16:46:43 (41732): Guest Log:  *** Contents of shared directory: ***
2025-06-06 16:46:43 (41732): Guest Log: total 389040
2025-06-06 16:46:43 (41732): Guest Log: -rwxrwxrwx. 1 root root 213660114 Jun  6 11:36 ATLAS.root_0
2025-06-06 16:46:43 (41732): Guest Log: -rwxrwxrwx. 1 root root 181576402 Jun  6  2025 HITS.pool.root.1
2025-06-06 16:46:43 (41732): Guest Log: -rwxrwxrwx. 1 root root      9043 Jun  6 11:36 init_data.xml
2025-06-06 16:46:43 (41732): Guest Log: -rwxrwxrwx. 1 root root    508878 Jun  4 10:33 input.tar.gz
2025-06-06 16:46:43 (41732): Guest Log: -rwxrwxrwx. 1 root root   2590720 Jun  6  2025 result.tar.gz
2025-06-06 16:46:43 (41732): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 10:33 start_atlas.sh
2025-06-06 16:46:43 (41732): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 16:46:43 (41732): VM Completion File Detected.
2025-06-06 16:46:43 (41732): Powering off VM.
2025-06-06 16:46:44 (41732): Successfully stopped VM.
2025-06-06 16:46:44 (41732): Deregistering VM. (boinc_7790c429dde5c8be, slot#0)
2025-06-06 16:46:44 (41732): Removing network bandwidth throttle group from VM.
2025-06-06 16:46:45 (41732): Removing VM from VirtualBox.
16:46:50 (41732): called boinc_finish(0)

</stderr_txt>
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