Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:46:27 (1288064): wrapper (7.7.26015): starting
19:46:27 (1288064): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 19:46:27] Arguments: --nthreads 12
[2025-06-05 19:46:27] Threads: 12
[2025-06-05 19:46:27] Checking for CVMFS
[2025-06-05 19:46:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 19:46:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 19:46:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 19:46:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 19:46:31] 2.12.7.0 16016 3620 62804 146830 0 56 2441190 4096001 912 130560 0 3441759 99.992 869642 137 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 19:46:31] CVMFS is ok
[2025-06-05 19:46:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 19:46:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 19:46:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 19:46:31] Further information can be found at the LHC@home message board.
[2025-06-05 19:46:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:46:31] Checking for apptainer binary...
[2025-06-05 19:46:31] apptainer is not installed, using version from CVMFS
[2025-06-05 19:46:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:46:33] g3250
[2025-06-05 19:46:33] apptainer works
[2025-06-05 19:46:33] Set ATHENA_PROC_NUMBER=12
[2025-06-05 19:46:33] Set ATHENA_CORE_NUMBER=12
[2025-06-05 19:46:33] Starting ATLAS job with PandaID=6678362612
[2025-06-05 19:46:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 22:40:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 22:40:41] 2025-06-05 22:40:20,540 | INFO     | PID=1291674 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 22:40:41] 2025-06-05 22:40:20,540 | INFO     | .. there are 2 such processes running
[2025-06-05 22:40:41] 2025-06-05 22:40:22,406 | INFO     | monitor loop #790: job 0:6678362612 is in state 'finished'
[2025-06-05 22:40:41] 2025-06-05 22:40:22,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 22:40:41] 2025-06-05 22:40:24,918 | INFO     | monitor loop #791: job 0:6678362612 is in state 'finished'
[2025-06-05 22:40:41] 2025-06-05 22:40:24,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 22:40:41] 2025-06-05 22:40:27,442 | INFO     | monitor loop #792: job 0:6678362612 is in state 'finished'
[2025-06-05 22:40:41] 2025-06-05 22:40:27,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 22:40:41] 2025-06-05 22:40:27,763 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 22:40:41] 2025-06-05 22:40:27,763 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6678362612/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 22:40:41] 2025-06-05 22:40:27,764 | INFO     | extracted standard info from prmon json
[2025-06-05 22:40:41] 2025-06-05 22:40:27,764 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 22:40:41] 2025-06-05 22:40:27,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 22:40:41] 2025-06-05 22:40:27,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 22:40:41] 2025-06-05 22:40:27,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 22:40:41] 2025-06-05 22:40:27,767 | INFO     | fitting pss+swap vs Time
[2025-06-05 22:40:41] 2025-06-05 22:40:27,767 | INFO     | sum of square deviations: 1444149868.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,768 | INFO     | sum of deviations: 8867501679.999983
[2025-06-05 22:40:41] 2025-06-05 22:40:27,768 | INFO     | mean x: 1749158067.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,768 | INFO     | mean y: 2640411.4550898205
[2025-06-05 22:40:41] 2025-06-05 22:40:27,769 | INFO     | -- intersect: -10737700630.28783
[2025-06-05 22:40:41] 2025-06-05 22:40:27,769 | INFO     | intersect: -10737700630.28783
[2025-06-05 22:40:41] 2025-06-05 22:40:27,769 | INFO     | chi2: 2.9495228680391143
[2025-06-05 22:40:41] 2025-06-05 22:40:27,769 | INFO     | sum of square deviations: 1318277740.5
[2025-06-05 22:40:41] 2025-06-05 22:40:27,770 | INFO     | sum of deviations: 19771852835.000004
[2025-06-05 22:40:41] 2025-06-05 22:40:27,770 | INFO     | mean x: 1749157914.5
[2025-06-05 22:40:41] 2025-06-05 22:40:27,770 | INFO     | mean y: 2653292.1481481483
[2025-06-05 22:40:41] 2025-06-05 22:40:27,770 | INFO     | -- intersect: -26231646057.81461
[2025-06-05 22:40:41] 2025-06-05 22:40:27,778 | INFO     | intersect: -26231646057.81461
[2025-06-05 22:40:41] 2025-06-05 22:40:27,779 | INFO     | chi2: 2.2618859456678226
[2025-06-05 22:40:41] 2025-06-05 22:40:27,779 | INFO     | current chi2=2.2618859456678226 (change=23.31349689885411 %)
[2025-06-05 22:40:41] 2025-06-05 22:40:27,779 | INFO     | right removable region: 161
[2025-06-05 22:40:41] 2025-06-05 22:40:27,779 | INFO     | sum of square deviations: 1318277740.5
[2025-06-05 22:40:41] 2025-06-05 22:40:27,780 | INFO     | sum of deviations: -26726132581.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,780 | INFO     | mean x: 1749158219.5
[2025-06-05 22:40:41] 2025-06-05 22:40:27,780 | INFO     | mean y: 2683136.1481481483
[2025-06-05 22:40:41] 2025-06-05 22:40:27,780 | INFO     | -- intersect: 35464280524.39814
[2025-06-05 22:40:41] 2025-06-05 22:40:27,780 | INFO     | intersect: 35464280524.39814
[2025-06-05 22:40:41] 2025-06-05 22:40:27,781 | INFO     | chi2: 0.9674609030644581
[2025-06-05 22:40:41] 2025-06-05 22:40:27,781 | INFO     | current chi2=0.9674609030644581 (change=67.19940999448362 %)
[2025-06-05 22:40:41] 2025-06-05 22:40:27,781 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,782 | INFO     | sum of deviations: -31626622176.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,782 | INFO     | mean x: 1749158372.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,782 | INFO     | mean y: 2689404.770700637
[2025-06-05 22:40:41] 2025-06-05 22:40:27,782 | INFO     | -- intersect: 46104945804.250404
[2025-06-05 22:40:41] 2025-06-05 22:40:27,782 | INFO     | intersect: 46104945804.250404
[2025-06-05 22:40:41] 2025-06-05 22:40:27,782 | INFO     | chi2: 0.9047654274263102
[2025-06-05 22:40:41] 2025-06-05 22:40:27,786 | INFO     | current chi2=0.9047654274263102 (change=6.480414396029683 %)
[2025-06-05 22:40:41] 2025-06-05 22:40:27,787 | INFO     | left removable region: 20
[2025-06-05 22:40:41] 2025-06-05 22:40:27,787 | INFO     | sum of square deviations: 869188390.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,787 | INFO     | sum of deviations: -8709300558.999998
[2025-06-05 22:40:41] 2025-06-05 22:40:27,788 | INFO     | mean x: 1749158494.0
[2025-06-05 22:40:41] 2025-06-05 22:40:27,788 | INFO     | mean y: 2687186.6170212766
[2025-06-05 22:40:41] 2025-06-05 22:40:27,788 | INFO     | -- intersect: 17529321486.890858
[2025-06-05 22:40:41] 2025-06-05 22:40:27,788 | INFO     | intersect: 17529321486.890858
[2025-06-05 22:40:41] 2025-06-05 22:40:27,788 | INFO     | chi2: 0.10898063535927115
[2025-06-05 22:40:41] 2025-06-05 22:40:27,788 | INFO     | -- intersect: 17529321486.890858
[2025-06-05 22:40:41] 2025-06-05 22:40:27,788 | INFO     | current memory leak: -10.02 B/s (using 141 data points, chi2=0.11)
[2025-06-05 22:40:41] 2025-06-05 22:40:27,789 | INFO     | ..............................
[2025-06-05 22:40:41] 2025-06-05 22:40:27,789 | INFO     | . Timing measurements:
[2025-06-05 22:40:41] 2025-06-05 22:40:27,789 | INFO     | . get job = 0 s
[2025-06-05 22:40:41] 2025-06-05 22:40:27,789 | INFO     | . initial setup = 4 s
[2025-06-05 22:40:41] 2025-06-05 22:40:27,789 | INFO     | . payload setup = 53 s
[2025-06-05 22:40:41] 2025-06-05 22:40:27,789 | INFO     | . stage-in = 0 s
[2025-06-05 22:40:41] 2025-06-05 22:40:27,789 | INFO     | . payload execution = 10164 s
[2025-06-05 22:40:41] 2025-06-05 22:40:27,790 | INFO     | . stage-out = 1 s
[2025-06-05 22:40:41] 2025-06-05 22:40:27,790 | INFO     | . log creation = 0 s
[2025-06-05 22:40:41] 2025-06-05 22:40:27,790 | INFO     | ..............................
[2025-06-05 22:40:41] 2025-06-05 22:40:28,002 | INFO     | 
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | job summary report
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | --------------------------------------------------
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | PanDA job id: 6678362612
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | task id: 45006595
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | errors: (none)
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | pilot state: finished 
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | transexitcode: 0
[2025-06-05 22:40:41] 2025-06-05 22:40:28,003 | INFO     | exeerrorcode: 0
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | exeerrordiag: 
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | exitcode: 0
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | exitmsg: OK
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | cpuconsumptiontime: 36091 s
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | nevents: 400
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | neventsw: 0
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | pid: 1298139
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | pgrp: 1298139
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | corecount: 12
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | event service: False
[2025-06-05 22:40:41] 2025-06-05 22:40:28,004 | INFO     | sizes: {0: 2397138, 1: 2397222, 2: 2397421, 13: 2397421, 23: 2397477, 30: 2397711, 34: 2397867, 10221: 2426218, 10225: 2435261, 10305: 2435375}
[2025-06-05 22:40:41] 2025-06-05 22:40:28,005 | INFO     | --------------------------------------------------
[2025-06-05 22:40:41] 2025-06-05 22:40:28,005 | INFO     | 
[2025-06-05 22:40:41] 2025-06-05 22:40:28,005 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 22:40:41] 2025-06-05 22:40:28,060 | INFO     | job 6678362612 has completed (purged errors)
[2025-06-05 22:40:41] 2025-06-05 22:40:28,061 | INFO     | overall cleanup function is called
[2025-06-05 22:40:41] 2025-06-05 22:40:29,070 | INFO     | --- collectZombieJob: --- 10, [1298139]
[2025-06-05 22:40:41] 2025-06-05 22:40:29,071 | INFO     | zombie collector waiting for pid 1298139
[2025-06-05 22:40:41] 2025-06-05 22:40:29,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 22:40:41] 2025-06-05 22:40:29,071 | INFO     | collected zombie processes
[2025-06-05 22:40:41] 2025-06-05 22:40:29,071 | INFO     | will attempt to kill all subprocesses of pid=1298139
[2025-06-05 22:40:41] 2025-06-05 22:40:29,192 | INFO     | process IDs to be killed: [1298139] (in reverse order)
[2025-06-05 22:40:41] 2025-06-05 22:40:29,335 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 22:40:41] 2025-06-05 22:40:29,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 22:40:41] 2025-06-05 22:40:29,337 | INFO     | did not find any defunct processes belonging to 1298139
[2025-06-05 22:40:41] 2025-06-05 22:40:29,338 | INFO     | did not find any defunct processes belonging to 1298139
[2025-06-05 22:40:41] 2025-06-05 22:40:29,342 | INFO     | ready for new job
[2025-06-05 22:40:41] 2025-06-05 22:40:29,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 22:40:41] 2025-06-05 22:40:29,344 | INFO     | **************************************
[2025-06-05 22:40:41] 2025-06-05 22:40:29,344 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 22:40:41] 2025-06-05 22:40:29,344 | INFO     | **************************************
[2025-06-05 22:40:41] 2025-06-05 22:40:29,344 | INFO     | 
[2025-06-05 22:40:41] 2025-06-05 22:40:29,363 | INFO     | architecture information:
[2025-06-05 22:40:41] 2025-06-05 22:40:29,366 | INFO     | executing command: cat /etc/os-release
[2025-06-05 22:40:41] 2025-06-05 22:40:29,435 | INFO     | cat /etc/os-release:
[2025-06-05 22:40:41] NAME="CentOS Linux"
[2025-06-05 22:40:41] VERSION="7 (Core)"
[2025-06-05 22:40:41] ID="centos"
[2025-06-05 22:40:41] ID_LIKE="rhel fedora"
[2025-06-05 22:40:41] VERSION_ID="7"
[2025-06-05 22:40:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 22:40:41] ANSI_COLOR="0;31"
[2025-06-05 22:40:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 22:40:41] HOME_URL="https://www.centos.org/"
[2025-06-05 22:40:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 22:40:41] 
[2025-06-05 22:40:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 22:40:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 22:40:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 22:40:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 22:40:41] 
[2025-06-05 22:40:41] 2025-06-05 22:40:29,435 | INFO     | **************************************
[2025-06-05 22:40:41] 2025-06-05 22:40:29,939 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 22:40:41] 2025-06-05 22:40:30,003 | INFO     | sufficient remaining disk space (30651973632 B)
[2025-06-05 22:40:41] 2025-06-05 22:40:30,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 22:40:41] 2025-06-05 22:40:30,003 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 22:40:41] 2025-06-05 22:40:30,003 | INFO     | update_server=False
[2025-06-05 22:40:41] 2025-06-05 22:40:30,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 22:40:41] 2025-06-05 22:40:30,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:40:41] 2025-06-05 22:40:30,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 22:40:41] 2025-06-05 22:40:30,450 | INFO     | all job control threads have been joined
[2025-06-05 22:40:41] 2025-06-05 22:40:30,587 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 22:40:41] 2025-06-05 22:40:30,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 22:40:41] 2025-06-05 22:40:30,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 22:40:41] 2025-06-05 22:40:30,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 22:40:41] 2025-06-05 22:40:30,758 | INFO     | all data control threads have been joined
[2025-06-05 22:40:41] 2025-06-05 22:40:30,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:40:41] 2025-06-05 22:40:30,975 | INFO     | aborting loop
[2025-06-05 22:40:41] 2025-06-05 22:40:31,011 | INFO     | [job] queue monitor thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,011 | INFO     | [job] retrieve thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,298 | INFO     | all payload control threads have been joined
[2025-06-05 22:40:41] 2025-06-05 22:40:31,315 | INFO     | [job] validate thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,318 | INFO     | [payload] failed_post thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,455 | INFO     | [job] control thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,715 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,767 | INFO     | [data] control thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,982 | INFO     | [job] job monitor thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:31,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:32,122 | INFO     | [payload] validate_post thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:32,310 | INFO     | [payload] control thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:32,311 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:32,342 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:32,438 | INFO     | [data] copytool_in thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:32,650 | INFO     | [data] copytool_out thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:34,314 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 22:40:41] 2025-06-05 22:40:35,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559388022592)>', '<ExcThread(monitor, started 140558509012736)>']
[2025-06-05 22:40:41] 2025-06-05 22:40:35,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 22:40:41] 2025-06-05 22:40:35,611 | INFO     | [monitor] control thread has ended
[2025-06-05 22:40:41] 2025-06-05 22:40:40,634 | INFO     | all workflow threads have been joined
[2025-06-05 22:40:41] 2025-06-05 22:40:40,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 22:40:41] 2025-06-05 22:40:40,635 | INFO     | traces error code: 0
[2025-06-05 22:40:41] 2025-06-05 22:40:40,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 22:40:41] 2025-06-05 22:40:40,768 [wrapper] ==== pilot stdout END ====
[2025-06-05 22:40:41] 2025-06-05 22:40:40,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 22:40:41] 2025-06-05 22:40:40,874 [wrapper] pilotpid: 1291674
[2025-06-05 22:40:41] 2025-06-05 22:40:40,930 [wrapper] Pilot exit status: 0
[2025-06-05 22:40:41] 2025-06-05 22:40:41,126 [wrapper] pandaids: 6678362612
[2025-06-05 22:40:41] 2025-06-05 22:40:41,300 [wrapper] cleanup supervisor_pilot 1346817 1291675
[2025-06-05 22:40:41] 2025-06-05 22:40:41,353 [wrapper] Test setup, not cleaning
[2025-06-05 22:40:41] 2025-06-05 22:40:41,405 [wrapper] apfmon messages muted
[2025-06-05 22:40:41] 2025-06-05 22:40:41,424 [wrapper] ==== wrapper stdout END ====
[2025-06-05 22:40:41] 2025-06-05 22:40:41,439 [wrapper] ==== wrapper stderr END ====
[2025-06-05 22:40:41]  *** Error codes and diagnostics ***
[2025-06-05 22:40:41]     "exeErrorCode": 0,
[2025-06-05 22:40:41]     "exeErrorDiag": "",
[2025-06-05 22:40:41]     "pilotErrorCode": 0,
[2025-06-05 22:40:41]     "pilotErrorDiag": "",
[2025-06-05 22:40:41]  *** Listing of results directory ***
[2025-06-05 22:40:41] total 390872
[2025-06-05 22:40:41] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-05 22:40:41] -rwx------ 1 boinc boinc     37140 Jun  4 05:13 runpilot2-wrapper.sh
[2025-06-05 22:40:41] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:13 queuedata.json
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc       100 Jun  5 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 22:40:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 19:46 run_atlas
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc       105 Jun  5 19:46 job.xml
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc      9357 Jun  5 19:46 init_data.xml
[2025-06-05 22:40:41] -rw-r--r-- 2 boinc boinc 215964357 Jun  5 19:46 EVNT.45006593._002125.pool.root.1
[2025-06-05 22:40:41] drwxrwx--x 2 boinc boinc      4096 Jun  5 19:46 shared
[2025-06-05 22:40:41] -rw-r--r-- 2 boinc boinc    508882 Jun  5 19:46 input.tar.gz
[2025-06-05 22:40:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:46 start_atlas.sh
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc         0 Jun  5 19:46 boinc_lockfile
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 19:46 pandaJob.out
[2025-06-05 22:40:41] -rw------- 1 boinc boinc    987599 Jun  5 19:47 agis_schedconf.cvmfs.json
[2025-06-05 22:40:41] -rw------- 1 boinc boinc   1598969 Jun  5 19:47 agis_ddmendpoints.agis.ALL.json
[2025-06-05 22:40:41] drwx------ 4 boinc boinc      4096 Jun  5 19:47 pilot3
[2025-06-05 22:40:41] -rw------- 1 boinc boinc 177620832 Jun  5 22:38 HITS.45006595._053107.pool.root.1
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc       530 Jun  5 22:38 boinc_task_state.xml
[2025-06-05 22:40:41] -rw------- 1 boinc boinc      1021 Jun  5 22:39 memory_monitor_summary.json
[2025-06-05 22:40:41] -rw------- 1 boinc boinc    427482 Jun  5 22:39 log.45006595._053107.job.log.tgz.1
[2025-06-05 22:40:41] -rw------- 1 boinc boinc        95 Jun  5 22:40 pilot_heartbeat.json
[2025-06-05 22:40:41] -rw------- 1 boinc boinc      7665 Jun  5 22:40 heartbeat.json
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc        28 Jun  5 22:40 wrapper_checkpoint.txt
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 22:40 boinc_mmap_file
[2025-06-05 22:40:41] -rw------- 1 boinc boinc      4376 Jun  5 22:40 pilotlog.txt
[2025-06-05 22:40:41] -rw------- 1 boinc boinc    984065 Jun  5 22:40 log.45006595._053107.job.log.1
[2025-06-05 22:40:41] -rw------- 1 boinc boinc       357 Jun  5 22:40 output.list
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc       620 Jun  5 22:40 runtime_log
[2025-06-05 22:40:41] -rw------- 1 boinc boinc   1433600 Jun  5 22:40 result.tar.gz
[2025-06-05 22:40:41] -rw------- 1 boinc boinc       651 Jun  5 22:40 tuIODm0cvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTkaKDmIDx7Qn.diag
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc      8949 Jun  5 22:40 runtime_log.err
[2025-06-05 22:40:41] -rw-rw-r-- 1 boinc boinc     21352 Jun  5 22:40 stderr.txt
[2025-06-05 22:40:41] HITS file was successfully produced:
[2025-06-05 22:40:42] -rw------- 1 boinc boinc 177620832 Jun  5 22:38 shared/HITS.pool.root.1
[2025-06-05 22:40:42]  *** Contents of shared directory: ***
[2025-06-05 22:40:42] total 386288
[2025-06-05 22:40:42] -rw-r--r-- 2 boinc boinc 215964357 Jun  5 19:46 ATLAS.root_0
[2025-06-05 22:40:42] -rw-r--r-- 2 boinc boinc    508882 Jun  5 19:46 input.tar.gz
[2025-06-05 22:40:42] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:46 start_atlas.sh
[2025-06-05 22:40:42] -rw------- 1 boinc boinc 177620832 Jun  5 22:38 HITS.pool.root.1
[2025-06-05 22:40:42] -rw------- 1 boinc boinc   1433600 Jun  5 22:40 result.tar.gz
22:40:43 (1288064): run_atlas exited; CPU time 36166.655573
22:40:43 (1288064): called boinc_finish(0)

</stderr_txt>
]]>

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