Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:34:18 (2785053): wrapper (7.7.26015): starting
06:34:18 (2785053): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:34:18] Arguments: --nthreads 8
[2025-06-04 06:34:18] Threads: 8
[2025-06-04 06:34:18] Checking for CVMFS
[2025-06-04 06:34:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:34:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:34:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:34:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:34:18] 2.12.6.0 2939844 23132 438460 146777 0 197 26256324 40960000 8335 16776704 1 123545159 99.690 102322437 27270 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:34:18] CVMFS is ok
[2025-06-04 06:34:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:34:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:34:18] Further information can be found at the LHC@home message board.
[2025-06-04 06:34:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:34:18] Checking for apptainer binary...
[2025-06-04 06:34:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:34:18] Running /usr/bin/apptainer --version
[2025-06-04 06:34:18] apptainer version 1.4.1-1.el9
[2025-06-04 06:34:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:34:18] c7-11-15.aglt2.org
[2025-06-04 06:34:18] apptainer works
[2025-06-04 06:34:18] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:34:18] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:34:18] Starting ATLAS job with PandaID=6678286433
[2025-06-04 06:34:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:32:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:32:53]  scope=mc23_13p6TeV
[2025-06-04 07:32:53]  status=None
[2025-06-04 07:32:53]  status_code=0
[2025-06-04 07:32:53]  storage_token=
[2025-06-04 07:32:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678286433/log.45006595._051361.job.log.tgz.1
[2025-06-04 07:32:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/4f/log.45006595._051361.job.log.tgz.1
[2025-06-04 07:32:53]  workdir=None
[2025-06-04 07:32:53] ]
[2025-06-04 07:32:53] 2025-06-04 11:32:30,033 | INFO     | transferring file log.45006595._051361.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678286433/log.45006595._051361.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:32:53] 2025-06-04 11:32:30,033 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678286433/log.45006595._051361.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051361.job
[2025-06-04 07:32:53] 2025-06-04 11:32:30,051 | INFO     | adding to output.list: log.45006595._051361.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/4f/log.45006595._051361.job.log.tg
[2025-06-04 07:32:53] 2025-06-04 11:32:30,052 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:32:53] 2025-06-04 11:32:30,052 | INFO     | summary of transferred files:
[2025-06-04 07:32:53] 2025-06-04 11:32:30,052 | INFO     |  -- lfn=log.45006595._051361.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:32:53] 2025-06-04 11:32:30,052 | INFO     | stage-out finished correctly
[2025-06-04 07:32:53] 2025-06-04 11:32:30,106 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:32:53] 2025-06-04 11:32:30,167 | INFO     | job 6678286433 has state=finished
[2025-06-04 07:32:53] 2025-06-04 11:32:30,168 | INFO     | preparing for final server update for job 6678286433 in state='finished'
[2025-06-04 07:32:53] 2025-06-04 11:32:30,168 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:32:53] 2025-06-04 11:32:30,168 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:32:53] 2025-06-04 11:32:30,169 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:32:53] 2025-06-04 11:32:30,169 | INFO     | job 6678286433 has finished - writing final server update
[2025-06-04 07:32:53] 2025-06-04 11:32:30,169 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:32:53] 2025-06-04 11:32:30,186 | INFO     | executing command: lscpu
[2025-06-04 07:32:53] 2025-06-04 11:32:30,245 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:32:53] 2025-06-04 11:32:30,533 | WARNING  | process 2795320 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:32:53] 2025-06-04 11:32:30,534 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286433/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:32:53] 2025-06-04 11:32:30,536 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286433/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:32:53] 2025-06-04 11:32:30,537 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3056323 B
[2025-06-04 07:32:53] 2025-06-04 11:32:30,537 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15301 B
[2025-06-04 07:32:53] 2025-06-04 11:32:30,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:32:53] 2025-06-04 11:32:33,729 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:32:53] 2025-06-04 11:32:33,730 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286433/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,735 | INFO     | extracted standard info from prmon json
[2025-06-04 07:32:53] 2025-06-04 11:32:33,735 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:32:53] 2025-06-04 11:32:33,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:32:53] 2025-06-04 11:32:33,736 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:32:53] 2025-06-04 11:32:33,736 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:32:53] 2025-06-04 11:32:33,739 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:32:53] 2025-06-04 11:32:33,739 | INFO     | sum of square deviations: 38744912.5
[2025-06-04 07:32:53] 2025-06-04 11:32:33,739 | INFO     | sum of deviations: 2772792118.4999995
[2025-06-04 07:32:53] 2025-06-04 11:32:33,739 | INFO     | mean x: 1749035090.5
[2025-06-04 07:32:53] 2025-06-04 11:32:33,739 | INFO     | mean y: 2223230.14
[2025-06-04 07:32:53] 2025-06-04 11:32:33,739 | INFO     | -- intersect: -125168035288.79028
[2025-06-04 07:32:53] 2025-06-04 11:32:33,739 | INFO     | intersect: -125168035288.79028
[2025-06-04 07:32:53] 2025-06-04 11:32:33,740 | INFO     | chi2: 0.8332102637892415
[2025-06-04 07:32:53] 2025-06-04 11:32:33,740 | INFO     | -- intersect: -125168035288.79028
[2025-06-04 07:32:53] 2025-06-04 11:32:33,740 | INFO     | current memory leak: 71.57 B/s (using 50 data points, chi2=0.83)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,740 | INFO     | ..............................
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . Timing measurements:
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . get job = 0 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . initial setup = 2 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . payload setup = 5 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . stage-in = 0 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . payload execution = 3458 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . stage-out = 0 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | . log creation = 0 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,741 | INFO     | ..............................
[2025-06-04 07:32:53] 2025-06-04 11:32:33,769 | INFO     | sufficient remaining disk space (86055583744 B)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,784 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,824 | INFO     | 
[2025-06-04 07:32:53] 2025-06-04 11:32:33,824 | INFO     | job summary report
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | --------------------------------------------------
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | PanDA job id: 6678286433
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | task id: 45006595
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | errors: (none)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | pilot state: finished 
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | transexitcode: 0
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | exeerrorcode: 0
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | exeerrordiag: 
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | exitcode: 0
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | exitmsg: OK
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | cpuconsumptiontime: 23022 s
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | nevents: 400
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | neventsw: 0
[2025-06-04 07:32:53] 2025-06-04 11:32:33,825 | INFO     | pid: 2795320
[2025-06-04 07:32:53] 2025-06-04 11:32:33,826 | INFO     | pgrp: 2795320
[2025-06-04 07:32:53] 2025-06-04 11:32:33,826 | INFO     | corecount: 8
[2025-06-04 07:32:53] 2025-06-04 11:32:33,826 | INFO     | event service: False
[2025-06-04 07:32:53] 2025-06-04 11:32:33,826 | INFO     | sizes: {0: 2405070, 1: 2405212, 4: 2405418, 11: 2405446, 3467: 2431100, 3468: 2440225, 3472: 2440339}
[2025-06-04 07:32:53] 2025-06-04 11:32:33,826 | INFO     | --------------------------------------------------
[2025-06-04 07:32:53] 2025-06-04 11:32:33,826 | INFO     | 
[2025-06-04 07:32:53] 2025-06-04 11:32:33,826 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:32:53] 2025-06-04 11:32:33,831 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678286433: 3345796 B (within 2537553920 B limit)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,832 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678286433/HITS.45006595._051361.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,832 | INFO     | total size of present files: 0 B (workdir size: 3345796 B)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,832 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678286433/HITS.45006595._051361.pool.root.1 since it does not exist
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | job 6678286433 has completed (purged errors)
[2025-06-04 07:32:53] 2025-06-04 11:32:33,845 | INFO     | overall cleanup function is called
[2025-06-04 07:32:53] 2025-06-04 11:32:34,035 | INFO     | number of running child processes to parent process 2795320: 1
[2025-06-04 07:32:53] 2025-06-04 11:32:34,036 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:32:53] 2025-06-04 11:32:34,036 | INFO     | aborting job monitoring since job object (job id=6678286433) has expired
[2025-06-04 07:32:53] 2025-06-04 11:32:34,853 | INFO     | --- collectZombieJob: --- 10, [2795320]
[2025-06-04 07:32:53] 2025-06-04 11:32:34,853 | INFO     | zombie collector waiting for pid 2795320
[2025-06-04 07:32:53] 2025-06-04 11:32:34,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:32:53] 2025-06-04 11:32:34,854 | INFO     | collected zombie processes
[2025-06-04 07:32:53] 2025-06-04 11:32:34,854 | INFO     | will attempt to kill all subprocesses of pid=2795320
[2025-06-04 07:32:53] 2025-06-04 11:32:35,053 | INFO     | process IDs to be killed: [2795320] (in reverse order)
[2025-06-04 07:32:53] 2025-06-04 11:32:35,154 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:32:53] 2025-06-04 11:32:35,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:32:53] 2025-06-04 11:32:35,165 | INFO     | did not find any defunct processes belonging to 2795320
[2025-06-04 07:32:53] 2025-06-04 11:32:35,172 | INFO     | did not find any defunct processes belonging to 2795320
[2025-06-04 07:32:53] 2025-06-04 11:32:35,173 | INFO     | ready for new job
[2025-06-04 07:32:53] 2025-06-04 11:32:35,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:32:53] 2025-06-04 11:32:35,174 | INFO     | **************************************
[2025-06-04 07:32:53] 2025-06-04 11:32:35,174 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:32:53] 2025-06-04 11:32:35,174 | INFO     | **************************************
[2025-06-04 07:32:53] 2025-06-04 11:32:35,174 | INFO     | 
[2025-06-04 07:32:53] 2025-06-04 11:32:35,189 | INFO     | architecture information:
[2025-06-04 07:32:53] 2025-06-04 11:32:35,189 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:32:53] 2025-06-04 11:32:35,204 | INFO     | cat /etc/os-release:
[2025-06-04 07:32:53] NAME="CentOS Linux"
[2025-06-04 07:32:53] VERSION="7 (Core)"
[2025-06-04 07:32:53] ID="centos"
[2025-06-04 07:32:53] ID_LIKE="rhel fedora"
[2025-06-04 07:32:53] VERSION_ID="7"
[2025-06-04 07:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:32:53] ANSI_COLOR="0;31"
[2025-06-04 07:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:32:53] HOME_URL="https://www.centos.org/"
[2025-06-04 07:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:32:53] 
[2025-06-04 07:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:32:53] 
[2025-06-04 07:32:53] 2025-06-04 11:32:35,204 | INFO     | **************************************
[2025-06-04 07:32:53] 2025-06-04 11:32:35,707 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:32:53] 2025-06-04 11:32:35,725 | INFO     | sufficient remaining disk space (86056632320 B)
[2025-06-04 07:32:53] 2025-06-04 11:32:35,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:32:53] 2025-06-04 11:32:35,725 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:32:53] 2025-06-04 11:32:35,725 | INFO     | update_server=False
[2025-06-04 07:32:53] 2025-06-04 11:32:35,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:32:53] 2025-06-04 11:32:35,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:32:53] 2025-06-04 11:32:35,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:32:53] 2025-06-04 11:32:35,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:32:53] 2025-06-04 11:32:35,726 | INFO     | aborting loop
[2025-06-04 07:32:53] 2025-06-04 11:32:35,973 | INFO     | all payload control threads have been joined
[2025-06-04 07:32:53] 2025-06-04 11:32:36,170 | INFO     | all job control threads have been joined
[2025-06-04 07:32:53] 2025-06-04 11:32:36,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:32:53] 2025-06-04 11:32:36,511 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:32:53] 2025-06-04 11:32:36,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:32:53] 2025-06-04 11:32:36,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:32:53] 2025-06-04 11:32:36,564 | INFO     | all data control threads have been joined
[2025-06-04 07:32:53] 2025-06-04 11:32:36,731 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:36,732 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:36,732 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:36,805 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:36,978 | INFO     | [payload] control thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,132 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,175 | INFO     | [job] control thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,332 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,358 | INFO     | [job] validate thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,569 | INFO     | [data] control thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,656 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,732 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:37,826 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:38,302 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:40,179 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:46,241 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:32:53] 2025-06-04 11:32:47,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:32:53] 2025-06-04 11:32:48,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098436310848)>', '<ExcThread(monitor, started 140098163152640)>']
[2025-06-04 07:32:53] 2025-06-04 11:32:49,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:32:53] 2025-06-04 11:32:49,571 | INFO     | [monitor] control thread has ended
[2025-06-04 07:32:53] 2025-06-04 11:32:53,733 | INFO     | all workflow threads have been joined
[2025-06-04 07:32:53] 2025-06-04 11:32:53,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:32:53] 2025-06-04 11:32:53,733 | INFO     | traces error code: 0
[2025-06-04 07:32:53] 2025-06-04 11:32:53,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:32:53] 2025-06-04 11:32:53,843 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:32:53] 2025-06-04 11:32:53,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:32:53] 2025-06-04 11:32:53,848 [wrapper] pilotpid: 2788863
[2025-06-04 07:32:53] 2025-06-04 11:32:53,852 [wrapper] Pilot exit status: 0
[2025-06-04 07:32:53] 2025-06-04 11:32:53,861 [wrapper] pandaids: 6678286433
[2025-06-04 07:32:53] 2025-06-04 11:32:53,920 [wrapper] cleanup supervisor_pilot 2911083 2788864
[2025-06-04 07:32:53] 2025-06-04 11:32:53,922 [wrapper] Test setup, not cleaning
[2025-06-04 07:32:53] 2025-06-04 11:32:53,925 [wrapper] apfmon messages muted
[2025-06-04 07:32:53] 2025-06-04 11:32:53,927 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:32:53] 2025-06-04 11:32:53,929 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:32:53]  *** Error codes and diagnostics ***
[2025-06-04 07:32:53]     "exeErrorCode": 0,
[2025-06-04 07:32:53]     "exeErrorDiag": "",
[2025-06-04 07:32:53]     "pilotErrorCode": 0,
[2025-06-04 07:32:53]     "pilotErrorDiag": "",
[2025-06-04 07:32:53]  *** Listing of results directory ***
[2025-06-04 07:32:53] total 397848
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 23:13 queuedata.json
[2025-06-04 07:32:53] -rwx------. 1 boincer umatlas     37140 Jun  3 23:13 runpilot2-wrapper.sh
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:32:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:34 run_atlas
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:34 job.xml
[2025-06-04 07:32:53] -rw-r--r--. 2 boincer umatlas 213776270 Jun  4 06:34 EVNT.45006593._002058.pool.root.1
[2025-06-04 07:32:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:34 start_atlas.sh
[2025-06-04 07:32:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:34 shared
[2025-06-04 07:32:53] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 06:34 input.tar.gz
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:34 boinc_lockfile
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:34 pandaJob.out
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas    986812 Jun  4 06:34 agis_schedconf.cvmfs.json
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:32:53] drwx------. 4 boincer umatlas      4096 Jun  4 06:34 pilot3
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 07:30 init_data.xml
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:32 boinc_task_state.xml
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas 188507514 Jun  4 07:32 HITS.45006595._051361.pool.root.1
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas      1020 Jun  4 07:32 memory_monitor_summary.json
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas        95 Jun  4 07:32 pilot_heartbeat.json
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas    282595 Jun  4 07:32 log.45006595._051361.job.log.tgz.1
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas      7676 Jun  4 07:32 heartbeat.json
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:32 wrapper_checkpoint.txt
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:32 boinc_mmap_file
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas      4425 Jun  4 07:32 pilotlog.txt
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas    356353 Jun  4 07:32 log.45006595._051361.job.log.1
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas       357 Jun  4 07:32 output.list
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:32 runtime_log
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas    655360 Jun  4 07:32 result.tar.gz
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 07:32 runtime_log.err
[2025-06-04 07:32:53] -rw-------. 1 boincer umatlas       651 Jun  4 07:32 2FjNDmWktg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMbaKDmVRZHln.diag
[2025-06-04 07:32:53] -rw-r--r--. 1 boincer umatlas     22115 Jun  4 07:32 stderr.txt
[2025-06-04 07:32:54] HITS file was successfully produced:
[2025-06-04 07:32:54] -rw-------. 1 boincer umatlas 188507514 Jun  4 07:32 shared/HITS.pool.root.1
[2025-06-04 07:32:54]  *** Contents of shared directory: ***
[2025-06-04 07:32:54] total 394024
[2025-06-04 07:32:54] -rw-r--r--. 2 boincer umatlas 213776270 Jun  4 06:34 ATLAS.root_0
[2025-06-04 07:32:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:34 start_atlas.sh
[2025-06-04 07:32:54] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 06:34 input.tar.gz
[2025-06-04 07:32:54] -rw-------. 1 boincer umatlas 188507514 Jun  4 07:32 HITS.pool.root.1
[2025-06-04 07:32:54] -rw-------. 1 boincer umatlas    655360 Jun  4 07:32 result.tar.gz
07:32:55 (2785053): run_atlas exited; CPU time 23038.928651
07:32:55 (2785053): called boinc_finish(0)

</stderr_txt>
]]>

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