Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:39:14 (744850): wrapper (7.7.26015): starting
00:39:14 (744850): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:39:14] Arguments: --nthreads 12
[2025-06-05 00:39:14] Threads: 12
[2025-06-05 00:39:14] Checking for CVMFS
[2025-06-05 00:39:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:39:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:39:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:39:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:39:15] 2.12.7.0 2877684 3004 95740 146797 0 56 3713427 4097024 0 130560 0 4929612 99.995 755949 7315 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-05 00:39:15] CVMFS is ok
[2025-06-05 00:39:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:39:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:39:15] Further information can be found at the LHC@home message board.
[2025-06-05 00:39:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:39:15] Checking for apptainer binary...
[2025-06-05 00:39:15] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-05 00:39:15] apptainer is not installed, using version from CVMFS
[2025-06-05 00:39:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:39:15] pckelar2.cern.ch
[2025-06-05 00:39:15] apptainer works
[2025-06-05 00:39:15] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:39:15] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:39:15] Starting ATLAS job with PandaID=6678363722
[2025-06-05 00:39:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:18:34]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:18:34]  lfn=log.45006595._053597.job.log.tgz.1
[2025-06-05 01:18:34]  mtime=0
[2025-06-05 01:18:34]  protocol_id=None
[2025-06-05 01:18:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:18:34]  replicas=None
[2025-06-05 01:18:34]  scope=mc23_13p6TeV
[2025-06-05 01:18:34]  status=None
[2025-06-05 01:18:34]  status_code=0
[2025-06-05 01:18:34]  storage_token=
[2025-06-05 01:18:34]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678363722/log.45006595._053597.job.log.tgz.1
[2025-06-05 01:18:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/c5/log.45006595._053597.job.log.tgz.1
[2025-06-05 01:18:34]  workdir=None
[2025-06-05 01:18:34] ]
[2025-06-05 01:18:34] 2025-06-04 23:18:08,210 | INFO     | transferring file log.45006595._053597.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678363722/log.45006595._053597.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-05 01:18:34] 2025-06-04 23:18:08,211 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678363722/log.45006595._053597.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._053597.job
[2025-06-05 01:18:34] 2025-06-04 23:18:08,222 | INFO     | adding to output.list: log.45006595._053597.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/c5/log.45006595._053597.job.log.tg
[2025-06-05 01:18:34] 2025-06-04 23:18:08,223 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:18:34] 2025-06-04 23:18:08,223 | INFO     | summary of transferred files:
[2025-06-05 01:18:34] 2025-06-04 23:18:08,223 | INFO     |  -- lfn=log.45006595._053597.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:18:34] 2025-06-04 23:18:08,223 | INFO     | stage-out finished correctly
[2025-06-05 01:18:34] 2025-06-04 23:18:08,267 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:18:34] 2025-06-04 23:18:08,753 | INFO     | PID=748602 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 01:18:34] 2025-06-04 23:18:11,288 | INFO     | job 6678363722 has state=finished
[2025-06-05 01:18:34] 2025-06-04 23:18:11,289 | INFO     | preparing for final server update for job 6678363722 in state='finished'
[2025-06-05 01:18:34] 2025-06-04 23:18:11,289 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:18:34] 2025-06-04 23:18:11,289 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:18:34] 2025-06-04 23:18:11,289 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:18:34] 2025-06-04 23:18:11,289 | INFO     | job 6678363722 has finished - writing final server update
[2025-06-05 01:18:34] 2025-06-04 23:18:11,289 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:18:34] 2025-06-04 23:18:11,291 | INFO     | executing command: lscpu
[2025-06-05 01:18:34] 2025-06-04 23:18:11,315 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:18:34] 2025-06-04 23:18:12,515 | WARNING  | process 755863 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 01:18:34] 2025-06-04 23:18:12,515 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678363722/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:18:34] 2025-06-04 23:18:12,588 | INFO     | number of running child processes to parent process 755863: 1
[2025-06-05 01:18:34] 2025-06-04 23:18:12,588 | INFO     | maximum number of monitored processes: 6
[2025-06-05 01:18:34] 2025-06-04 23:18:15,090 | INFO     | monitor loop #182: job 0:6678363722 is in state 'finished'
[2025-06-05 01:18:34] 2025-06-04 23:18:15,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:18:34] 2025-06-04 23:18:15,418 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:18:34] 2025-06-04 23:18:15,418 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678363722/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:18:34] 2025-06-04 23:18:15,418 | INFO     | extracted standard info from prmon json
[2025-06-05 01:18:34] 2025-06-04 23:18:15,418 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:18:34] 2025-06-04 23:18:15,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:18:34] 2025-06-04 23:18:15,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:18:34] 2025-06-04 23:18:15,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:18:34] 2025-06-04 23:18:15,419 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:18:34] 2025-06-04 23:18:15,419 | INFO     | sum of square deviations: 9228080.0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | sum of deviations: 185312632.0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | mean x: 1749078005.0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | mean y: 3155609.580645161
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | -- intersect: -35120754096.431786
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | intersect: -35120754096.431786
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | chi2: 0.00010406800491558434
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | -- intersect: -35120754096.431786
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | current memory leak: 20.08 B/s (using 31 data points, chi2=0.00)
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | ..............................
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | . Timing measurements:
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | . get job = 0 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | . initial setup = 1 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | . payload setup = 5 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,420 | INFO     | . stage-in = 0 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,421 | INFO     | . payload execution = 2302 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,421 | INFO     | . stage-out = 0 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,421 | INFO     | . log creation = 0 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,421 | INFO     | ..............................
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | 
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | job summary report
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | --------------------------------------------------
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | PanDA job id: 6678363722
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | task id: 45006595
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | errors: (none)
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | pilot state: finished 
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | transexitcode: 0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | exeerrorcode: 0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | exeerrordiag: 
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | exitcode: 0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | exitmsg: OK
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | cpuconsumptiontime: 24926 s
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | nevents: 400
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | neventsw: 0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,473 | INFO     | pid: 755863
[2025-06-05 01:18:34] 2025-06-04 23:18:15,474 | INFO     | pgrp: 755863
[2025-06-05 01:18:34] 2025-06-04 23:18:15,474 | INFO     | corecount: 12
[2025-06-05 01:18:34] 2025-06-04 23:18:15,474 | INFO     | event service: False
[2025-06-05 01:18:34] 2025-06-04 23:18:15,474 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 2312: 2422639, 2313: 2431636, 2320: 2431750}
[2025-06-05 01:18:34] 2025-06-04 23:18:15,474 | INFO     | --------------------------------------------------
[2025-06-05 01:18:34] 2025-06-04 23:18:15,474 | INFO     | 
[2025-06-05 01:18:34] 2025-06-04 23:18:15,474 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-05 01:18:34] 2025-06-04 23:18:15,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:18:34] 2025-06-04 23:18:15,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:18:34] 2025-06-04 23:18:15,489 | INFO     | job 6678363722 has completed (purged errors)
[2025-06-05 01:18:34] 2025-06-04 23:18:15,489 | INFO     | overall cleanup function is called
[2025-06-05 01:18:34] 2025-06-04 23:18:16,496 | INFO     | --- collectZombieJob: --- 10, [755863]
[2025-06-05 01:18:34] 2025-06-04 23:18:16,496 | INFO     | zombie collector waiting for pid 755863
[2025-06-05 01:18:34] 2025-06-04 23:18:16,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:18:34] 2025-06-04 23:18:16,496 | INFO     | collected zombie processes
[2025-06-05 01:18:34] 2025-06-04 23:18:16,496 | INFO     | will attempt to kill all subprocesses of pid=755863
[2025-06-05 01:18:34] 2025-06-04 23:18:16,573 | INFO     | process IDs to be killed: [755863] (in reverse order)
[2025-06-05 01:18:34] 2025-06-04 23:18:16,603 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:18:34] 2025-06-04 23:18:16,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:18:34] 2025-06-04 23:18:16,605 | INFO     | did not find any defunct processes belonging to 755863
[2025-06-05 01:18:34] 2025-06-04 23:18:16,607 | INFO     | did not find any defunct processes belonging to 755863
[2025-06-05 01:18:34] 2025-06-04 23:18:16,608 | INFO     | ready for new job
[2025-06-05 01:18:34] 2025-06-04 23:18:16,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:18:34] 2025-06-04 23:18:16,609 | INFO     | **************************************
[2025-06-05 01:18:34] 2025-06-04 23:18:16,609 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:18:34] 2025-06-04 23:18:16,609 | INFO     | **************************************
[2025-06-05 01:18:34] 2025-06-04 23:18:16,609 | INFO     | 
[2025-06-05 01:18:34] 2025-06-04 23:18:16,610 | INFO     | architecture information:
[2025-06-05 01:18:34] 2025-06-04 23:18:16,610 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:18:34] 2025-06-04 23:18:16,619 | INFO     | cat /etc/os-release:
[2025-06-05 01:18:34] NAME="CentOS Linux"
[2025-06-05 01:18:34] VERSION="7 (Core)"
[2025-06-05 01:18:34] ID="centos"
[2025-06-05 01:18:34] ID_LIKE="rhel fedora"
[2025-06-05 01:18:34] VERSION_ID="7"
[2025-06-05 01:18:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:18:34] ANSI_COLOR="0;31"
[2025-06-05 01:18:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:18:34] HOME_URL="https://www.centos.org/"
[2025-06-05 01:18:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:18:34] 
[2025-06-05 01:18:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:18:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:18:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:18:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:18:34] 
[2025-06-05 01:18:34] 2025-06-04 23:18:16,619 | INFO     | **************************************
[2025-06-05 01:18:34] 2025-06-04 23:18:17,122 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-05 01:18:34] 2025-06-04 23:18:17,134 | INFO     | sufficient remaining disk space (234283335680 B)
[2025-06-05 01:18:34] 2025-06-04 23:18:17,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:18:34] 2025-06-04 23:18:17,135 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:18:34] 2025-06-04 23:18:17,135 | INFO     | update_server=False
[2025-06-05 01:18:34] 2025-06-04 23:18:17,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:18:34] 2025-06-04 23:18:17,135 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:18:34] 2025-06-04 23:18:17,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:18:34] 2025-06-04 23:18:17,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:18:34] 2025-06-04 23:18:17,136 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:18:34] 2025-06-04 23:18:17,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:18:34] 2025-06-04 23:18:17,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:18:34] 2025-06-04 23:18:17,158 | INFO     | all data control threads have been joined
[2025-06-05 01:18:34] 2025-06-04 23:18:17,340 | INFO     | all payload control threads have been joined
[2025-06-05 01:18:34] 2025-06-04 23:18:17,593 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 01:18:34] 2025-06-04 23:18:17,593 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 01:18:34] 2025-06-04 23:18:17,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:18:34] 2025-06-04 23:18:17,594 | INFO     | will abort loop
[2025-06-05 01:18:34] 2025-06-04 23:18:18,140 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,141 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,163 | INFO     | [data] control thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,200 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,258 | INFO     | [job] validate thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,272 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,342 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,345 | INFO     | [payload] control thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,426 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,429 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,555 | INFO     | all job control threads have been joined
[2025-06-05 01:18:34] 2025-06-04 23:18:18,599 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:18,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:18:34] 2025-06-04 23:18:19,124 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:19,140 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:19,561 | INFO     | [job] control thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:22,823 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:27,643 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:18:34] 2025-06-04 23:18:28,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:18:34] 2025-06-04 23:18:28,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466722543424)>', '<ExcThread(monitor, started 140465806493440)>']
[2025-06-05 01:18:34] 2025-06-04 23:18:29,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:18:34] 2025-06-04 23:18:29,197 | INFO     | [monitor] control thread has ended
[2025-06-05 01:18:34] 2025-06-04 23:18:34,004 | INFO     | all workflow threads have been joined
[2025-06-05 01:18:34] 2025-06-04 23:18:34,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:18:34] 2025-06-04 23:18:34,004 | INFO     | traces error code: 0
[2025-06-05 01:18:34] 2025-06-04 23:18:34,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:18:34] 2025-06-04 23:18:34,079 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:18:34] 2025-06-04 23:18:34,082 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:18:34] 2025-06-04 23:18:34,084 [wrapper] pilotpid: 748602
[2025-06-05 01:18:34] 2025-06-04 23:18:34,086 [wrapper] Pilot exit status: 0
[2025-06-05 01:18:34] 2025-06-04 23:18:34,095 [wrapper] pandaids: 6678363722
[2025-06-05 01:18:34] 2025-06-04 23:18:34,115 [wrapper] cleanup supervisor_pilot  766252 748603
[2025-06-05 01:18:34] 2025-06-04 23:18:34,117 [wrapper] Test setup, not cleaning
[2025-06-05 01:18:34] 2025-06-04 23:18:34,120 [wrapper] apfmon messages muted
[2025-06-05 01:18:34] 2025-06-04 23:18:34,122 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:18:34] 2025-06-04 23:18:34,124 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:18:34]  *** Error codes and diagnostics ***
[2025-06-05 01:18:34]     "exeErrorCode": 0,
[2025-06-05 01:18:34]     "exeErrorDiag": "",
[2025-06-05 01:18:34]     "pilotErrorCode": 0,
[2025-06-05 01:18:34]     "pilotErrorDiag": "",
[2025-06-05 01:18:34]  *** Listing of results directory ***
[2025-06-05 01:18:34] total 392988
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-05 01:18:34] -rwx------ 1 boinc boinc     37140 Jun  4 07:31 runpilot2-wrapper.sh
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:31 queuedata.json
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:18:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:39 run_atlas
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:39 job.xml
[2025-06-05 01:18:34] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:39 start_atlas.sh
[2025-06-05 01:18:34] drwxrwx--x 2 boinc boinc        68 Jun  5 00:39 shared
[2025-06-05 01:18:34] -rw-r--r-- 2 boinc boinc    508879 Jun  5 00:39 input.tar.gz
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc      6471 Jun  5 00:39 init_data.xml
[2025-06-05 01:18:34] -rw-r--r-- 2 boinc boinc 215831549 Jun  5 00:39 EVNT.45006593._002145.pool.root.1
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:39 boinc_lockfile
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc      2525 Jun  5 00:39 pandaJob.out
[2025-06-05 01:18:34] -rw------- 1 boinc boinc    987032 Jun  5 00:39 agis_schedconf.cvmfs.json
[2025-06-05 01:18:34] -rw------- 1 boinc boinc   1598969 Jun  5 00:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:18:34] drwx------ 4 boinc boinc      4096 Jun  5 00:39 pilot3
[2025-06-05 01:18:34] -rw------- 1 boinc boinc        95 Jun  5 01:17 pilot_heartbeat.json
[2025-06-05 01:18:34] -rw------- 1 boinc boinc 181582188 Jun  5 01:17 HITS.45006595._053597.pool.root.1
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:17 boinc_task_state.xml
[2025-06-05 01:18:34] -rw------- 1 boinc boinc      1014 Jun  5 01:18 memory_monitor_summary.json
[2025-06-05 01:18:34] -rw------- 1 boinc boinc    340171 Jun  5 01:18 log.45006595._053597.job.log.tgz.1
[2025-06-05 01:18:34] -rw------- 1 boinc boinc      7687 Jun  5 01:18 heartbeat.json
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:18 wrapper_checkpoint.txt
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:18 boinc_mmap_file
[2025-06-05 01:18:34] -rw------- 1 boinc boinc      4735 Jun  5 01:18 pilotlog.txt
[2025-06-05 01:18:34] -rw------- 1 boinc boinc    251888 Jun  5 01:18 log.45006595._053597.job.log.1
[2025-06-05 01:18:34] -rw------- 1 boinc boinc       357 Jun  5 01:18 output.list
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:18 runtime_log
[2025-06-05 01:18:34] -rw------- 1 boinc boinc    614400 Jun  5 01:18 result.tar.gz
[2025-06-05 01:18:34] -rw------- 1 boinc boinc       653 Jun  5 01:18 UdhKDmctvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVPnKDmr7cOTm.diag
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc      8683 Jun  5 01:18 runtime_log.err
[2025-06-05 01:18:34] -rw-r--r-- 1 boinc boinc     21734 Jun  5 01:18 stderr.txt
[2025-06-05 01:18:34] HITS file was successfully produced:
[2025-06-05 01:18:34] -rw------- 1 boinc boinc 181582188 Jun  5 01:17 shared/HITS.pool.root.1
[2025-06-05 01:18:34]  *** Contents of shared directory: ***
[2025-06-05 01:18:34] total 389220
[2025-06-05 01:18:34] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:39 start_atlas.sh
[2025-06-05 01:18:34] -rw-r--r-- 2 boinc boinc    508879 Jun  5 00:39 input.tar.gz
[2025-06-05 01:18:34] -rw-r--r-- 2 boinc boinc 215831549 Jun  5 00:39 ATLAS.root_0
[2025-06-05 01:18:34] -rw------- 1 boinc boinc 181582188 Jun  5 01:17 HITS.pool.root.1
[2025-06-05 01:18:34] -rw------- 1 boinc boinc    614400 Jun  5 01:18 result.tar.gz
01:18:35 (744850): run_atlas exited; CPU time 24923.786343
01:18:35 (744850): called boinc_finish(0)

</stderr_txt>
]]>

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