Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:23:51 (2528015): wrapper (7.7.26015): starting
07:23:51 (2528015): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 07:23:51] Arguments: --nthreads 12
[2025-06-04 07:23:51] Threads: 12
[2025-06-04 07:23:51] Checking for CVMFS
[2025-06-04 07:23:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:23:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:23:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:23:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:23:51] 2.12.6.0 6469 756 148760 146779 0 376 27874317 32935937 7553 16776704 0 4964555 99.668 3463396 40328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:23:51] CVMFS is ok
[2025-06-04 07:23:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:23:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:23:51] Further information can be found at the LHC@home message board.
[2025-06-04 07:23:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:23:51] Checking for apptainer binary...
[2025-06-04 07:23:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:23:51] Running /usr/bin/apptainer --version
[2025-06-04 07:23:51] apptainer version 1.4.1-1.el9
[2025-06-04 07:23:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:23:52] c6-1-26-3.aglt2.org
[2025-06-04 07:23:52] apptainer works
[2025-06-04 07:23:52] Set ATHENA_PROC_NUMBER=12
[2025-06-04 07:23:52] Set ATHENA_CORE_NUMBER=12
[2025-06-04 07:23:52] Starting ATLAS job with PandaID=6678314055
[2025-06-04 07:23:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:18:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:18:10]  lfn=log.45006595._052940.job.log.tgz.1
[2025-06-04 08:18:10]  mtime=0
[2025-06-04 08:18:10]  protocol_id=None
[2025-06-04 08:18:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:18:10]  replicas=None
[2025-06-04 08:18:10]  scope=mc23_13p6TeV
[2025-06-04 08:18:10]  status=None
[2025-06-04 08:18:10]  status_code=0
[2025-06-04 08:18:10]  storage_token=
[2025-06-04 08:18:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678314055/log.45006595._052940.job.log.tgz.1
[2025-06-04 08:18:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/9d/log.45006595._052940.job.log.tgz.1
[2025-06-04 08:18:10]  workdir=None
[2025-06-04 08:18:10] ]
[2025-06-04 08:18:10] 2025-06-04 12:17:44,283 | INFO     | monitor loop #244: job 0:6678314055 is in state 'stageout'
[2025-06-04 08:18:10] 2025-06-04 12:17:44,294 | WARNING  | aborting job monitor tasks since payload process 2538764 is not running
[2025-06-04 08:18:10] 2025-06-04 12:17:44,299 | INFO     | transferring file log.45006595._052940.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678314055/log.45006595._052940.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:18:10] 2025-06-04 12:17:44,300 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678314055/log.45006595._052940.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052940.job
[2025-06-04 08:18:10] 2025-06-04 12:17:44,313 | INFO     | adding to output.list: log.45006595._052940.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/9d/log.45006595._052940.job.log.tg
[2025-06-04 08:18:10] 2025-06-04 12:17:44,314 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:18:10] 2025-06-04 12:17:44,314 | INFO     | summary of transferred files:
[2025-06-04 08:18:10] 2025-06-04 12:17:44,314 | INFO     |  -- lfn=log.45006595._052940.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:18:10] 2025-06-04 12:17:44,314 | INFO     | stage-out finished correctly
[2025-06-04 08:18:10] 2025-06-04 12:17:46,802 | INFO     | monitor loop #245: job 0:6678314055 is in state 'finished'
[2025-06-04 08:18:10] 2025-06-04 12:17:46,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:18:10] 2025-06-04 12:17:47,849 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:18:10] 2025-06-04 12:17:48,396 | INFO     | job 6678314055 has state=finished
[2025-06-04 08:18:10] 2025-06-04 12:17:48,396 | INFO     | preparing for final server update for job 6678314055 in state='finished'
[2025-06-04 08:18:10] 2025-06-04 12:17:48,397 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:18:10] 2025-06-04 12:17:48,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:18:10] 2025-06-04 12:17:48,397 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:18:10] 2025-06-04 12:17:48,397 | INFO     | job 6678314055 has finished - writing final server update
[2025-06-04 08:18:10] 2025-06-04 12:17:48,397 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:18:10] 2025-06-04 12:17:48,412 | INFO     | executing command: lscpu
[2025-06-04 08:18:10] 2025-06-04 12:17:48,470 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:18:10] 2025-06-04 12:17:49,305 | INFO     | monitor loop #246: job 0:6678314055 is in state 'finished'
[2025-06-04 08:18:10] 2025-06-04 12:17:49,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:18:10] 2025-06-04 12:17:51,808 | INFO     | monitor loop #247: job 0:6678314055 is in state 'finished'
[2025-06-04 08:18:10] 2025-06-04 12:17:51,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:18:10] 2025-06-04 12:17:52,059 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:18:10] 2025-06-04 12:17:52,059 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678314055/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:18:10] 2025-06-04 12:17:52,061 | INFO     | extracted standard info from prmon json
[2025-06-04 08:18:10] 2025-06-04 12:17:52,061 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:18:10] 2025-06-04 12:17:52,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:18:10] 2025-06-04 12:17:52,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:18:10] 2025-06-04 12:17:52,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:18:10] 2025-06-04 12:17:52,065 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:18:10] 2025-06-04 12:17:52,065 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 08:18:10] 2025-06-04 12:17:52,066 | INFO     | sum of deviations: 7256889369.5
[2025-06-04 08:18:10] 2025-06-04 12:17:52,066 | INFO     | mean x: 1749037943.5
[2025-06-04 08:18:10] 2025-06-04 12:17:52,066 | INFO     | mean y: 2677883.586956522
[2025-06-04 08:18:10] 2025-06-04 12:17:52,066 | INFO     | -- intersect: -420726959598.6793
[2025-06-04 08:18:10] 2025-06-04 12:17:52,066 | INFO     | intersect: -420726959598.6793
[2025-06-04 08:18:10] 2025-06-04 12:17:52,067 | INFO     | chi2: 0.7256568949117321
[2025-06-04 08:18:10] 2025-06-04 12:17:52,067 | INFO     | -- intersect: -420726959598.6793
[2025-06-04 08:18:10] 2025-06-04 12:17:52,067 | INFO     | current memory leak: 240.55 B/s (using 46 data points, chi2=0.73)
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | ..............................
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | . Timing measurements:
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | . get job = 0 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | . initial setup = 2 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | . payload setup = 5 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | . stage-in = 0 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | . payload execution = 3196 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,068 | INFO     | . stage-out = 0 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,069 | INFO     | . log creation = 0 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,069 | INFO     | ..............................
[2025-06-04 08:18:10] 2025-06-04 12:17:52,192 | INFO     | 
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | job summary report
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | --------------------------------------------------
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | PanDA job id: 6678314055
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | task id: 45006595
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | errors: (none)
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | pilot state: finished 
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | transexitcode: 0
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | exeerrorcode: 0
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | exeerrordiag: 
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | exitcode: 0
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | exitmsg: OK
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | cpuconsumptiontime: 30534 s
[2025-06-04 08:18:10] 2025-06-04 12:17:52,193 | INFO     | nevents: 400
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | neventsw: 0
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | pid: 2538764
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | pgrp: 2538764
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | corecount: 12
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | event service: False
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 3205: 2430862, 3207: 2439803, 3211: 2439859, 3215: 2440157}
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | --------------------------------------------------
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | 
[2025-06-04 08:18:10] 2025-06-04 12:17:52,194 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:18:10] 2025-06-04 12:17:52,212 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | job 6678314055 has completed (purged errors)
[2025-06-04 08:18:10] 2025-06-04 12:17:52,214 | INFO     | overall cleanup function is called
[2025-06-04 08:18:10] 2025-06-04 12:17:53,222 | INFO     | --- collectZombieJob: --- 10, [2538764]
[2025-06-04 08:18:10] 2025-06-04 12:17:53,223 | INFO     | zombie collector waiting for pid 2538764
[2025-06-04 08:18:10] 2025-06-04 12:17:53,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:18:10] 2025-06-04 12:17:53,223 | INFO     | collected zombie processes
[2025-06-04 08:18:10] 2025-06-04 12:17:53,223 | INFO     | will attempt to kill all subprocesses of pid=2538764
[2025-06-04 08:18:10] 2025-06-04 12:17:53,440 | INFO     | process IDs to be killed: [2538764] (in reverse order)
[2025-06-04 08:18:10] 2025-06-04 12:17:53,516 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:18:10] 2025-06-04 12:17:53,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:18:10] 2025-06-04 12:17:53,525 | INFO     | did not find any defunct processes belonging to 2538764
[2025-06-04 08:18:10] 2025-06-04 12:17:53,534 | INFO     | did not find any defunct processes belonging to 2538764
[2025-06-04 08:18:10] 2025-06-04 12:17:53,534 | INFO     | ready for new job
[2025-06-04 08:18:10] 2025-06-04 12:17:53,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:18:10] 2025-06-04 12:17:53,535 | INFO     | **************************************
[2025-06-04 08:18:10] 2025-06-04 12:17:53,536 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:18:10] 2025-06-04 12:17:53,536 | INFO     | **************************************
[2025-06-04 08:18:10] 2025-06-04 12:17:53,536 | INFO     | 
[2025-06-04 08:18:10] 2025-06-04 12:17:53,551 | INFO     | architecture information:
[2025-06-04 08:18:10] 2025-06-04 12:17:53,551 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:18:10] 2025-06-04 12:17:53,567 | INFO     | cat /etc/os-release:
[2025-06-04 08:18:10] NAME="CentOS Linux"
[2025-06-04 08:18:10] VERSION="7 (Core)"
[2025-06-04 08:18:10] ID="centos"
[2025-06-04 08:18:10] ID_LIKE="rhel fedora"
[2025-06-04 08:18:10] VERSION_ID="7"
[2025-06-04 08:18:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:18:10] ANSI_COLOR="0;31"
[2025-06-04 08:18:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:18:10] HOME_URL="https://www.centos.org/"
[2025-06-04 08:18:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:18:10] 
[2025-06-04 08:18:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:18:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:18:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:18:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:18:10] 
[2025-06-04 08:18:10] 2025-06-04 12:17:53,567 | INFO     | **************************************
[2025-06-04 08:18:10] 2025-06-04 12:17:54,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:18:10] 2025-06-04 12:17:54,087 | INFO     | sufficient remaining disk space (76293341184 B)
[2025-06-04 08:18:10] 2025-06-04 12:17:54,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:18:10] 2025-06-04 12:17:54,088 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:18:10] 2025-06-04 12:17:54,088 | INFO     | update_server=False
[2025-06-04 08:18:10] 2025-06-04 12:17:54,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:18:10] 2025-06-04 12:17:54,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:18:10] 2025-06-04 12:17:54,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:18:10] 2025-06-04 12:17:54,311 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:18:10] 2025-06-04 12:17:54,311 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:18:10] 2025-06-04 12:17:54,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:18:10] 2025-06-04 12:17:54,311 | INFO     | will abort loop
[2025-06-04 08:18:10] 2025-06-04 12:17:54,455 | INFO     | all payload control threads have been joined
[2025-06-04 08:18:10] 2025-06-04 12:17:54,836 | INFO     | all job control threads have been joined
[2025-06-04 08:18:10] 2025-06-04 12:17:54,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:18:10] 2025-06-04 12:17:55,089 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:18:10] 2025-06-04 12:17:55,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:18:10] 2025-06-04 12:17:55,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:18:10] 2025-06-04 12:17:55,094 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:55,094 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:55,112 | INFO     | all data control threads have been joined
[2025-06-04 08:18:10] 2025-06-04 12:17:55,164 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:55,317 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:55,461 | INFO     | [payload] control thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:55,536 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:55,546 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:55,842 | INFO     | [job] control thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:56,057 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:56,117 | INFO     | [data] control thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:56,135 | INFO     | [job] validate thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:56,514 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:56,574 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:56,881 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:17:58,095 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:18:04,347 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:18:10] 2025-06-04 12:18:05,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:18:10] 2025-06-04 12:18:05,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415709439808)>', '<ExcThread(monitor, started 140415072192256)>']
[2025-06-04 08:18:10] 2025-06-04 12:18:06,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:18:10] 2025-06-04 12:18:06,140 | INFO     | [monitor] control thread has ended
[2025-06-04 08:18:10] 2025-06-04 12:18:10,531 | INFO     | all workflow threads have been joined
[2025-06-04 08:18:10] 2025-06-04 12:18:10,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:18:10] 2025-06-04 12:18:10,531 | INFO     | traces error code: 0
[2025-06-04 08:18:10] 2025-06-04 12:18:10,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:18:10] 2025-06-04 12:18:10,723 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:18:10] 2025-06-04 12:18:10,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:18:10] 2025-06-04 12:18:10,731 [wrapper] pilotpid: 2532065
[2025-06-04 08:18:10] 2025-06-04 12:18:10,734 [wrapper] Pilot exit status: 0
[2025-06-04 08:18:10] 2025-06-04 12:18:10,745 [wrapper] pandaids: 6678314055
[2025-06-04 08:18:10] 2025-06-04 12:18:10,798 [wrapper] cleanup supervisor_pilot 2673970 2532066
[2025-06-04 08:18:10] 2025-06-04 12:18:10,802 [wrapper] Test setup, not cleaning
[2025-06-04 08:18:10] 2025-06-04 12:18:10,806 [wrapper] apfmon messages muted
[2025-06-04 08:18:10] 2025-06-04 12:18:10,810 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:18:10] 2025-06-04 12:18:10,815 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:18:10]  *** Error codes and diagnostics ***
[2025-06-04 08:18:10]     "exeErrorCode": 0,
[2025-06-04 08:18:10]     "exeErrorDiag": "",
[2025-06-04 08:18:10]     "pilotErrorCode": 0,
[2025-06-04 08:18:10]     "pilotErrorDiag": "",
[2025-06-04 08:18:10]  *** Listing of results directory ***
[2025-06-04 08:18:10] total 394468
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:09 queuedata.json
[2025-06-04 08:18:10] -rwx------. 1 boincer umatlas     37140 Jun  4 01:10 runpilot2-wrapper.sh
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:18:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:23 run_atlas
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:23 job.xml
[2025-06-04 08:18:10] -rw-r--r--. 2 boincer umatlas 216543766 Jun  4 07:23 EVNT.45006593._002120.pool.root.1
[2025-06-04 08:18:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:23 start_atlas.sh
[2025-06-04 08:18:10] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:23 shared
[2025-06-04 08:18:10] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 07:23 input.tar.gz
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:23 boinc_lockfile
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:23 pandaJob.out
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas    986812 Jun  4 07:23 agis_schedconf.cvmfs.json
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:18:10] drwx------. 4 boincer umatlas      4096 Jun  4 07:24 pilot3
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 08:13 init_data.xml
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas 182178220 Jun  4 08:17 HITS.45006595._052940.pool.root.1
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:17 boinc_task_state.xml
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas      1038 Jun  4 08:17 memory_monitor_summary.json
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas    348804 Jun  4 08:17 log.45006595._052940.job.log.tgz.1
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas        95 Jun  4 08:17 pilot_heartbeat.json
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas      7713 Jun  4 08:17 heartbeat.json
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:18 boinc_mmap_file
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:18 wrapper_checkpoint.txt
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas      4611 Jun  4 08:18 pilotlog.txt
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas    338294 Jun  4 08:18 log.45006595._052940.job.log.1
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas       357 Jun  4 08:18 output.list
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:18 runtime_log
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas    706560 Jun  4 08:18 result.tar.gz
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 08:18 runtime_log.err
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas       652 Jun  4 08:18 1N6LDmvZvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSKnKDmu30hcn.diag
[2025-06-04 08:18:10] -rw-r--r--. 1 boincer umatlas     21540 Jun  4 08:18 stderr.txt
[2025-06-04 08:18:10] HITS file was successfully produced:
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas 182178220 Jun  4 08:17 shared/HITS.pool.root.1
[2025-06-04 08:18:10]  *** Contents of shared directory: ***
[2025-06-04 08:18:10] total 390596
[2025-06-04 08:18:10] -rw-r--r--. 2 boincer umatlas 216543766 Jun  4 07:23 ATLAS.root_0
[2025-06-04 08:18:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:23 start_atlas.sh
[2025-06-04 08:18:10] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 07:23 input.tar.gz
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas 182178220 Jun  4 08:17 HITS.pool.root.1
[2025-06-04 08:18:10] -rw-------. 1 boincer umatlas    706560 Jun  4 08:18 result.tar.gz
08:18:12 (2528015): run_atlas exited; CPU time 30571.782134
08:18:12 (2528015): called boinc_finish(0)

</stderr_txt>
]]>

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