Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:26:53 (659376): wrapper (7.7.26015): starting
06:26:53 (659376): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:26:53] Arguments: --nthreads 8
[2025-06-04 06:26:53] Threads: 8
[2025-06-04 06:26:53] Checking for CVMFS
[2025-06-04 06:26:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:26:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:26:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:26:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:26:54] 2.12.6.0 976873 23119 418536 146777 0 66 25675328 32935936 10564 16776704 1 113080361 99.532 125749945 24656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:26:54] CVMFS is ok
[2025-06-04 06:26:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:26:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:26:54] Further information can be found at the LHC@home message board.
[2025-06-04 06:26:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:26:54] Checking for apptainer binary...
[2025-06-04 06:26:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:26:54] Running /usr/bin/apptainer --version
[2025-06-04 06:26:54] apptainer version 1.4.1-1.el9
[2025-06-04 06:26:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:26:54] c6-4-5-1.aglt2.org
[2025-06-04 06:26:54] apptainer works
[2025-06-04 06:26:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:26:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:26:54] Starting ATLAS job with PandaID=6678362678
[2025-06-04 06:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:30:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:30:26]  is_tar=False
[2025-06-04 07:30:26]  lfn=log.45006595._053173.job.log.tgz.1
[2025-06-04 07:30:26]  mtime=0
[2025-06-04 07:30:26]  protocol_id=None
[2025-06-04 07:30:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:30:26]  replicas=None
[2025-06-04 07:30:26]  scope=mc23_13p6TeV
[2025-06-04 07:30:26]  status=None
[2025-06-04 07:30:26]  status_code=0
[2025-06-04 07:30:26]  storage_token=
[2025-06-04 07:30:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678362678/log.45006595._053173.job.log.tgz.1
[2025-06-04 07:30:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/2b/log.45006595._053173.job.log.tgz.1
[2025-06-04 07:30:26]  workdir=None
[2025-06-04 07:30:26] ]
[2025-06-04 07:30:26] 2025-06-04 11:29:49,333 | INFO     | transferring file log.45006595._053173.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678362678/log.45006595._053173.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:30:26] 2025-06-04 11:29:49,334 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678362678/log.45006595._053173.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053173.job
[2025-06-04 07:30:26] 2025-06-04 11:29:49,352 | INFO     | adding to output.list: log.45006595._053173.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/2b/log.45006595._053173.job.log.tg
[2025-06-04 07:30:26] 2025-06-04 11:29:49,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:30:26] 2025-06-04 11:29:49,353 | INFO     | summary of transferred files:
[2025-06-04 07:30:26] 2025-06-04 11:29:49,353 | INFO     |  -- lfn=log.45006595._053173.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:30:26] 2025-06-04 11:29:49,353 | INFO     | stage-out finished correctly
[2025-06-04 07:30:26] 2025-06-04 11:29:50,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:30:26] 2025-06-04 11:29:50,456 | INFO     | job 6678362678 has state=finished
[2025-06-04 07:30:26] 2025-06-04 11:29:50,456 | INFO     | preparing for final server update for job 6678362678 in state='finished'
[2025-06-04 07:30:26] 2025-06-04 11:29:50,479 | INFO     | monitor loop #284: job 0:6678362678 is in state 'finished'
[2025-06-04 07:30:26] 2025-06-04 11:29:50,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:30:26] 2025-06-04 11:29:50,515 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 07:30:26] 2025-06-04 11:29:50,515 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:30:26] 2025-06-04 11:29:50,515 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:30:26] 2025-06-04 11:29:50,515 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:30:26] 2025-06-04 11:29:50,515 | INFO     | job 6678362678 has finished - writing final server update
[2025-06-04 07:30:26] 2025-06-04 11:29:50,516 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:30:26] 2025-06-04 11:29:50,516 | INFO     | executing command: lscpu
[2025-06-04 07:30:26] 2025-06-04 11:29:50,570 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:30:26] 2025-06-04 11:29:52,982 | INFO     | monitor loop #285: job 0:6678362678 is in state 'finished'
[2025-06-04 07:30:26] 2025-06-04 11:29:52,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:30:26] 2025-06-04 11:29:53,824 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:30:26] 2025-06-04 11:29:53,840 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2992.7803437499997
[2025-06-04 07:30:26] 2025-06-04 11:29:53,850 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678362678/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:30:26] 2025-06-04 11:29:53,851 | INFO     | extracted standard info from prmon json
[2025-06-04 07:30:26] 2025-06-04 11:29:53,851 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:30:26] 2025-06-04 11:29:53,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:30:26] 2025-06-04 11:29:53,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:30:26] 2025-06-04 11:29:53,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:30:26] 2025-06-04 11:29:53,853 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:30:26] 2025-06-04 11:29:53,853 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | sum of deviations: -105314853.00000066
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | mean x: 1749034799.0
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | mean y: 2341326.4545454546
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | -- intersect: 3573960748.4661674
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | intersect: 3573960748.4661674
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | chi2: 0.971167395480814
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | -- intersect: 3573960748.4661674
[2025-06-04 07:30:26] 2025-06-04 11:29:53,854 | INFO     | current memory leak: -2.04 B/s (using 55 data points, chi2=0.97)
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | could have reported an average CPU frequency of 2992 MHz (6 samples)
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | ..............................
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . Timing measurements:
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . get job = 0 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . initial setup = 2 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . payload setup = 5 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . stage-in = 0 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . payload execution = 3741 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . stage-out = 0 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,855 | INFO     | . log creation = 0 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,856 | INFO     | ..............................
[2025-06-04 07:30:26] 2025-06-04 11:29:53,942 | INFO     | 
[2025-06-04 07:30:26] 2025-06-04 11:29:53,942 | INFO     | job summary report
[2025-06-04 07:30:26] 2025-06-04 11:29:53,942 | INFO     | --------------------------------------------------
[2025-06-04 07:30:26] 2025-06-04 11:29:53,942 | INFO     | PanDA job id: 6678362678
[2025-06-04 07:30:26] 2025-06-04 11:29:53,942 | INFO     | task id: 45006595
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | errors: (none)
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | pilot state: finished 
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | transexitcode: 0
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | exeerrorcode: 0
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | exeerrordiag: 
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | exitcode: 0
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | exitmsg: OK
[2025-06-04 07:30:26] 2025-06-04 11:29:53,943 | INFO     | cpuconsumptiontime: 25135 s
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | nevents: 400
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | neventsw: 0
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | pid: 671975
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | pgrp: 671975
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | corecount: 8
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | event service: False
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | sizes: {0: 2405525, 4: 2405787, 11: 2405815, 3750: 2431680, 3751: 2440676, 3752: 2440676, 3756: 2440998}
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | --------------------------------------------------
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | 
[2025-06-04 07:30:26] 2025-06-04 11:29:53,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:30:26] 2025-06-04 11:29:53,961 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:30:26] 2025-06-04 11:29:53,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:30:26] 2025-06-04 11:29:53,963 | INFO     | job 6678362678 has completed (purged errors)
[2025-06-04 07:30:26] 2025-06-04 11:29:53,963 | INFO     | overall cleanup function is called
[2025-06-04 07:30:26] 2025-06-04 11:29:54,970 | INFO     | --- collectZombieJob: --- 10, [671975]
[2025-06-04 07:30:26] 2025-06-04 11:29:54,971 | INFO     | zombie collector waiting for pid 671975
[2025-06-04 07:30:26] 2025-06-04 11:29:54,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:30:26] 2025-06-04 11:29:54,971 | INFO     | collected zombie processes
[2025-06-04 07:30:26] 2025-06-04 11:29:54,971 | INFO     | will attempt to kill all subprocesses of pid=671975
[2025-06-04 07:30:26] 2025-06-04 11:29:55,194 | INFO     | process IDs to be killed: [671975] (in reverse order)
[2025-06-04 07:30:26] 2025-06-04 11:29:55,280 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:30:26] 2025-06-04 11:29:55,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:30:26] 2025-06-04 11:29:55,290 | INFO     | did not find any defunct processes belonging to 671975
[2025-06-04 07:30:26] 2025-06-04 11:29:55,299 | INFO     | did not find any defunct processes belonging to 671975
[2025-06-04 07:30:26] 2025-06-04 11:29:55,299 | INFO     | ready for new job
[2025-06-04 07:30:26] 2025-06-04 11:29:55,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:30:26] 2025-06-04 11:29:55,301 | INFO     | ***************************************
[2025-06-04 07:30:26] 2025-06-04 11:29:55,301 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-04 07:30:26] 2025-06-04 11:29:55,301 | INFO     | ***************************************
[2025-06-04 07:30:26] 2025-06-04 11:29:55,301 | INFO     | 
[2025-06-04 07:30:26] 2025-06-04 11:29:55,317 | INFO     | architecture information:
[2025-06-04 07:30:26] 2025-06-04 11:29:55,318 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:30:26] 2025-06-04 11:29:55,334 | INFO     | cat /etc/os-release:
[2025-06-04 07:30:26] NAME="CentOS Linux"
[2025-06-04 07:30:26] VERSION="7 (Core)"
[2025-06-04 07:30:26] ID="centos"
[2025-06-04 07:30:26] ID_LIKE="rhel fedora"
[2025-06-04 07:30:26] VERSION_ID="7"
[2025-06-04 07:30:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:30:26] ANSI_COLOR="0;31"
[2025-06-04 07:30:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:30:26] HOME_URL="https://www.centos.org/"
[2025-06-04 07:30:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:30:26] 
[2025-06-04 07:30:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:30:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:30:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:30:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:30:26] 
[2025-06-04 07:30:26] 2025-06-04 11:29:55,335 | INFO     | ***************************************
[2025-06-04 07:30:26] 2025-06-04 11:29:55,837 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:30:26] 2025-06-04 11:29:55,852 | INFO     | sufficient remaining disk space (76075237376 B)
[2025-06-04 07:30:26] 2025-06-04 11:29:55,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:30:26] 2025-06-04 11:29:55,853 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:30:26] 2025-06-04 11:29:55,853 | INFO     | update_server=False
[2025-06-04 07:30:26] 2025-06-04 11:29:55,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:30:26] 2025-06-04 11:29:55,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:30:26] 2025-06-04 11:29:55,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:30:26] 2025-06-04 11:29:56,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:30:26] 2025-06-04 11:29:56,445 | INFO     | all payload control threads have been joined
[2025-06-04 07:30:26] 2025-06-04 11:29:56,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:30:26] 2025-06-04 11:29:56,490 | INFO     | aborting loop
[2025-06-04 07:30:26] 2025-06-04 11:29:56,651 | INFO     | all data control threads have been joined
[2025-06-04 07:30:26] 2025-06-04 11:29:56,859 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:56,859 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:56,914 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:56,986 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,148 | INFO     | all job control threads have been joined
[2025-06-04 07:30:26] 2025-06-04 11:29:57,344 | INFO     | [job] validate thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,365 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,451 | INFO     | [payload] control thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,495 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,562 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,572 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,656 | INFO     | [data] control thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,681 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:57,859 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:29:58,154 | INFO     | [job] control thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:30:00,191 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:30:06,877 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:30:26] 2025-06-04 11:30:07,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:30:26] 2025-06-04 11:30:08,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628770936640)>', '<ExcThread(monitor, started 140628277053184)>']
[2025-06-04 07:30:26] 2025-06-04 11:30:13,713 | INFO     | all workflow threads have been joined
[2025-06-04 07:30:26] 2025-06-04 11:30:13,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:30:26] 2025-06-04 11:30:13,713 | INFO     | traces error code: 0
[2025-06-04 07:30:26] 2025-06-04 11:30:13,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:30:26] 2025-06-04 11:30:26,041 | INFO     | PID=663012 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 07:30:26] 2025-06-04 11:30:26,041 | INFO     | .. there are 17 such processes running
[2025-06-04 07:30:26] 2025-06-04 11:30:26,042 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:30:26] 2025-06-04 11:30:26,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:30:26] 2025-06-04 11:30:26,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:30:26] 2025-06-04 11:30:26,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:30:26] 2025-06-04 11:30:26,042 | INFO     | [monitor] control thread has ended
[2025-06-04 07:30:26] 2025-06-04 11:30:26,205 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:30:26] 2025-06-04 11:30:26,207 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:30:26] 2025-06-04 11:30:26,209 [wrapper] pilotpid: 663012
[2025-06-04 07:30:26] 2025-06-04 11:30:26,211 [wrapper] Pilot exit status: 0
[2025-06-04 07:30:26] 2025-06-04 11:30:26,221 [wrapper] pandaids: 6678362678
[2025-06-04 07:30:26] 2025-06-04 11:30:26,272 [wrapper] cleanup supervisor_pilot  848661 663013
[2025-06-04 07:30:26] 2025-06-04 11:30:26,274 [wrapper] Test setup, not cleaning
[2025-06-04 07:30:26] 2025-06-04 11:30:26,276 [wrapper] apfmon messages muted
[2025-06-04 07:30:26] 2025-06-04 11:30:26,278 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:30:26] 2025-06-04 11:30:26,280 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:30:26]  *** Error codes and diagnostics ***
[2025-06-04 07:30:26]     "exeErrorCode": 0,
[2025-06-04 07:30:26]     "exeErrorDiag": "",
[2025-06-04 07:30:26]     "pilotErrorCode": 0,
[2025-06-04 07:30:26]     "pilotErrorDiag": "",
[2025-06-04 07:30:26]  *** Listing of results directory ***
[2025-06-04 07:30:26] total 391808
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas    549845 Jun  2 05:40 pilot3.tar.gz
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:13 queuedata.json
[2025-06-04 07:30:26] -rwx------. 1 boincer umatlas     37140 Jun  4 01:14 runpilot2-wrapper.sh
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:30:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:26 run_atlas
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:26 job.xml
[2025-06-04 07:30:26] -rw-r--r--. 2 boincer umatlas 214999925 Jun  4 06:26 EVNT.45006593._002128.pool.root.1
[2025-06-04 07:30:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:26 start_atlas.sh
[2025-06-04 07:30:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:26 shared
[2025-06-04 07:30:26] -rw-r--r--. 2 boincer umatlas    564116 Jun  4 06:26 input.tar.gz
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:26 boinc_lockfile
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:26 pandaJob.out
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas    986812 Jun  4 06:27 agis_schedconf.cvmfs.json
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:30:26] drwx------. 6 boincer umatlas      4096 Jun  4 06:27 pilot3
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas      6855 Jun  4 07:28 init_data.xml
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas 180898030 Jun  4 07:29 HITS.45006595._053173.pool.root.1
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:29 boinc_task_state.xml
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas      1030 Jun  4 07:29 memory_monitor_summary.json
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas    298608 Jun  4 07:29 log.45006595._053173.job.log.tgz.1
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas      7737 Jun  4 07:29 heartbeat.json
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:30 boinc_mmap_file
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:30 wrapper_checkpoint.txt
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas       822 Jun  4 07:30 pilotlog.txt
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas        95 Jun  4 07:30 pilot_heartbeat.json
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas    389803 Jun  4 07:30 log.45006595._053173.job.log.1
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas       357 Jun  4 07:30 output.list
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:30 runtime_log
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas    706560 Jun  4 07:30 result.tar.gz
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 07:30 runtime_log.err
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas       651 Jun  4 07:30 788LDmxdvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNLnKDmZMarDm.diag
[2025-06-04 07:30:26] -rw-r--r--. 1 boincer umatlas     21548 Jun  4 07:30 stderr.txt
[2025-06-04 07:30:26] HITS file was successfully produced:
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas 180898030 Jun  4 07:29 shared/HITS.pool.root.1
[2025-06-04 07:30:26]  *** Contents of shared directory: ***
[2025-06-04 07:30:26] total 387888
[2025-06-04 07:30:26] -rw-r--r--. 2 boincer umatlas 214999925 Jun  4 06:26 ATLAS.root_0
[2025-06-04 07:30:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:26 start_atlas.sh
[2025-06-04 07:30:26] -rw-r--r--. 2 boincer umatlas    564116 Jun  4 06:26 input.tar.gz
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas 180898030 Jun  4 07:29 HITS.pool.root.1
[2025-06-04 07:30:26] -rw-------. 1 boincer umatlas    706560 Jun  4 07:30 result.tar.gz
07:30:27 (659376): run_atlas exited; CPU time 25227.178124
07:30:27 (659376): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN