Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:25:54 (47623): wrapper (7.7.26015): starting
06:25:54 (47623): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:25:54] Arguments: --nthreads 8
[2025-06-04 06:25:54] Threads: 8
[2025-06-04 06:25:54] Checking for CVMFS
[2025-06-04 06:25:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:25:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:25:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:25:55] 2.11.2.0 5085 28660 298452 146777 2 323 11301599 18432001 8317 130560 0 98313803 99.474 101226196 34802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:25:55] CVMFS is ok
[2025-06-04 06:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:25:55] Further information can be found at the LHC@home message board.
[2025-06-04 06:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:25:55] Checking for apptainer binary...
[2025-06-04 06:25:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:25:55] Running /usr/bin/apptainer --version
[2025-06-04 06:25:55] apptainer version 1.3.2-1.el7
[2025-06-04 06:25:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:25:56] c-211-39.aglt2.org
[2025-06-04 06:25:56] apptainer works
[2025-06-04 06:25:56] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:25:56] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:25:57] Starting ATLAS job with PandaID=6678363716
[2025-06-04 06:25:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:36:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:36:11] 2025-06-04 11:35:27,424 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6678363716/log.45006595._053591.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._053591.job
[2025-06-04 07:36:11] 2025-06-04 11:35:27,709 | INFO     | adding to output.list: log.45006595._053591.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/57/log.45006595._053591.job.log.tg
[2025-06-04 07:36:11] 2025-06-04 11:35:27,710 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:36:11] 2025-06-04 11:35:27,710 | INFO     | summary of transferred files:
[2025-06-04 07:36:11] 2025-06-04 11:35:27,710 | INFO     |  -- lfn=log.45006595._053591.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:36:11] 2025-06-04 11:35:27,710 | INFO     | stage-out finished correctly
[2025-06-04 07:36:11] 2025-06-04 11:35:29,078 | INFO     | 4138s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 07:36:11] 2025-06-04 11:35:29,475 | INFO     | monitor loop #315: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:29,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:31,095 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:36:11] 2025-06-04 11:35:31,174 | INFO     | job 6678363716 has state=finished
[2025-06-04 07:36:11] 2025-06-04 11:35:31,174 | INFO     | preparing for final server update for job 6678363716 in state='finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:31,174 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:36:11] 2025-06-04 11:35:31,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:36:11] 2025-06-04 11:35:31,175 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:36:11] 2025-06-04 11:35:31,175 | INFO     | job 6678363716 has finished - writing final server update
[2025-06-04 07:36:11] 2025-06-04 11:35:31,175 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:36:11] 2025-06-04 11:35:31,178 | INFO     | executing command: lscpu
[2025-06-04 07:36:11] 2025-06-04 11:35:31,338 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:36:11] 2025-06-04 11:35:31,979 | INFO     | monitor loop #316: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:31,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:34,481 | INFO     | monitor loop #317: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:34,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:36,984 | INFO     | monitor loop #318: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:36,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:39,488 | INFO     | monitor loop #319: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:39,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:40,301 | INFO     | PID=51437 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 07:36:11] 2025-06-04 11:35:40,302 | INFO     | .. there are 12 such processes running
[2025-06-04 07:36:11] 2025-06-04 11:35:41,991 | INFO     | monitor loop #320: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:41,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:44,494 | INFO     | monitor loop #321: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:44,494 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:46,997 | INFO     | monitor loop #322: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:46,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:49,500 | INFO     | monitor loop #323: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:49,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:52,004 | INFO     | monitor loop #324: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:52,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:54,507 | INFO     | monitor loop #325: job 0:6678363716 is in state 'finished'
[2025-06-04 07:36:11] 2025-06-04 11:35:54,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:36:11] 2025-06-04 11:35:56,900 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:36:11] 2025-06-04 11:35:56,900 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678363716/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:36:11] 2025-06-04 11:35:56,901 | INFO     | extracted standard info from prmon json
[2025-06-04 07:36:11] 2025-06-04 11:35:56,901 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:36:11] 2025-06-04 11:35:56,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:36:11] 2025-06-04 11:35:56,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:36:11] 2025-06-04 11:35:56,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:36:11] 2025-06-04 11:35:56,904 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:36:11] 2025-06-04 11:35:56,904 | INFO     | sum of square deviations: 66959395.0
[2025-06-04 07:36:11] 2025-06-04 11:35:56,904 | INFO     | sum of deviations: -3019040792.0000005
[2025-06-04 07:36:11] 2025-06-04 11:35:56,904 | INFO     | mean x: 1749034973.5
[2025-06-04 07:36:11] 2025-06-04 11:35:56,904 | INFO     | mean y: 2556701.1666666665
[2025-06-04 07:36:11] 2025-06-04 11:35:56,904 | INFO     | -- intersect: 78862407983.14345
[2025-06-04 07:36:11] 2025-06-04 11:35:56,904 | INFO     | intersect: 78862407983.14345
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | chi2: 0.0056019356144297
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | -- intersect: 78862407983.14345
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | current memory leak: -45.09 B/s (using 60 data points, chi2=0.01)
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | ..............................
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | . Timing measurements:
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | . get job = 0 s
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | . initial setup = 2 s
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | . payload setup = 21 s
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | . stage-in = 0 s
[2025-06-04 07:36:11] 2025-06-04 11:35:56,905 | INFO     | . payload execution = 4064 s
[2025-06-04 07:36:11] 2025-06-04 11:35:56,906 | INFO     | . stage-out = 1 s
[2025-06-04 07:36:11] 2025-06-04 11:35:56,906 | INFO     | . log creation = 0 s
[2025-06-04 07:36:11] 2025-06-04 11:35:56,906 | INFO     | ..............................
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | 
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | job summary report
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | --------------------------------------------------
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | PanDA job id: 6678363716
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | task id: 45006595
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | errors: (none)
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | pilot state: finished 
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | transexitcode: 0
[2025-06-04 07:36:11] 2025-06-04 11:35:57,094 | INFO     | exeerrorcode: 0
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | exeerrordiag: 
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | exitcode: 0
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | exitmsg: OK
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | cpuconsumptiontime: 27638 s
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | nevents: 400
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | neventsw: 0
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | pid: 58153
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | pgrp: 58153
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | corecount: 8
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | event service: False
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | sizes: {0: 2405184, 11: 2405184, 21: 2405418, 22: 2405446, 4089: 2431414, 4091: 2440355, 4094: 2440539, 4120: 2440709}
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | --------------------------------------------------
[2025-06-04 07:36:11] 2025-06-04 11:35:57,095 | INFO     | 
[2025-06-04 07:36:11] 2025-06-04 11:35:57,097 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:36:11] 2025-06-04 11:35:57,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:36:11] 2025-06-04 11:35:57,223 | INFO     | job 6678363716 has completed (purged errors)
[2025-06-04 07:36:11] 2025-06-04 11:35:57,223 | INFO     | overall cleanup function is called
[2025-06-04 07:36:11] 2025-06-04 11:35:58,231 | INFO     | --- collectZombieJob: --- 10, [58153]
[2025-06-04 07:36:11] 2025-06-04 11:35:58,231 | INFO     | zombie collector waiting for pid 58153
[2025-06-04 07:36:11] 2025-06-04 11:35:58,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:36:11] 2025-06-04 11:35:58,231 | INFO     | collected zombie processes
[2025-06-04 07:36:11] 2025-06-04 11:35:58,231 | INFO     | will attempt to kill all subprocesses of pid=58153
[2025-06-04 07:36:11] 2025-06-04 11:35:58,398 | INFO     | process IDs to be killed: [58153] (in reverse order)
[2025-06-04 07:36:11] 2025-06-04 11:35:58,893 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:36:11] 2025-06-04 11:35:58,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:36:11] 2025-06-04 11:35:58,900 | INFO     | did not find any defunct processes belonging to 58153
[2025-06-04 07:36:11] 2025-06-04 11:35:58,905 | INFO     | did not find any defunct processes belonging to 58153
[2025-06-04 07:36:11] 2025-06-04 11:35:58,905 | INFO     | ready for new job
[2025-06-04 07:36:11] 2025-06-04 11:35:58,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:36:11] 2025-06-04 11:35:58,906 | INFO     | **************************************
[2025-06-04 07:36:11] 2025-06-04 11:35:58,906 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:36:11] 2025-06-04 11:35:58,907 | INFO     | **************************************
[2025-06-04 07:36:11] 2025-06-04 11:35:58,907 | INFO     | 
[2025-06-04 07:36:11] 2025-06-04 11:35:58,910 | INFO     | architecture information:
[2025-06-04 07:36:11] 2025-06-04 11:35:58,910 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:36:11] 2025-06-04 11:35:58,974 | INFO     | cat /etc/os-release:
[2025-06-04 07:36:11] NAME="CentOS Linux"
[2025-06-04 07:36:11] VERSION="7 (Core)"
[2025-06-04 07:36:11] ID="centos"
[2025-06-04 07:36:11] ID_LIKE="rhel fedora"
[2025-06-04 07:36:11] VERSION_ID="7"
[2025-06-04 07:36:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:36:11] ANSI_COLOR="0;31"
[2025-06-04 07:36:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:36:11] HOME_URL="https://www.centos.org/"
[2025-06-04 07:36:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:36:11] 
[2025-06-04 07:36:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:36:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:36:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:36:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:36:11] 
[2025-06-04 07:36:11] 2025-06-04 11:35:58,974 | INFO     | **************************************
[2025-06-04 07:36:11] 2025-06-04 11:35:59,478 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 07:36:11] 2025-06-04 11:35:59,560 | INFO     | sufficient remaining disk space (74992058368 B)
[2025-06-04 07:36:11] 2025-06-04 11:35:59,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:36:11] 2025-06-04 11:35:59,560 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:36:11] 2025-06-04 11:35:59,560 | INFO     | update_server=False
[2025-06-04 07:36:11] 2025-06-04 11:35:59,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:36:11] 2025-06-04 11:35:59,657 | INFO     | all payload control threads have been joined
[2025-06-04 07:36:11] 2025-06-04 11:35:59,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:36:11] 2025-06-04 11:36:00,333 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:36:11] 2025-06-04 11:36:00,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:36:11] 2025-06-04 11:36:00,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:36:11] 2025-06-04 11:36:00,345 | INFO     | all job control threads have been joined
[2025-06-04 07:36:11] 2025-06-04 11:36:00,380 | INFO     | all data control threads have been joined
[2025-06-04 07:36:11] 2025-06-04 11:36:00,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:36:11] 2025-06-04 11:36:00,518 | INFO     | aborting loop
[2025-06-04 07:36:11] 2025-06-04 11:36:00,601 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:00,663 | INFO     | [payload] control thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:00,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:36:11] 2025-06-04 11:36:00,844 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,157 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,165 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,172 | INFO     | [job] validate thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,349 | INFO     | [job] control thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,385 | INFO     | [data] control thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,523 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,614 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,698 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:01,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:36:11] 2025-06-04 11:36:02,003 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:02,836 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:02,987 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:03,705 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:36:11] 2025-06-04 11:36:05,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599570663232)>', '<ExcThread(monitor, started 140598883370752)>']
[2025-06-04 07:36:11] 2025-06-04 11:36:05,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:36:11] 2025-06-04 11:36:05,352 | INFO     | [monitor] control thread has ended
[2025-06-04 07:36:11] 2025-06-04 11:36:10,126 | INFO     | all workflow threads have been joined
[2025-06-04 07:36:11] 2025-06-04 11:36:10,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:36:11] 2025-06-04 11:36:10,127 | INFO     | traces error code: 0
[2025-06-04 07:36:11] 2025-06-04 11:36:10,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:36:11] 2025-06-04 11:36:10,266 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:36:11] 2025-06-04 11:36:10,268 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:36:11] 2025-06-04 11:36:10,271 [wrapper] pilotpid: 51437
[2025-06-04 07:36:11] 2025-06-04 11:36:10,273 [wrapper] Pilot exit status: 0
[2025-06-04 07:36:11] 2025-06-04 11:36:10,433 [wrapper] pandaids: 6678363716
[2025-06-04 07:36:11] 2025-06-04 11:36:10,786 [wrapper] cleanup supervisor_pilot 45535 51438
[2025-06-04 07:36:11] 2025-06-04 11:36:10,827 [wrapper] Test setup, not cleaning
[2025-06-04 07:36:11] 2025-06-04 11:36:10,852 [wrapper] apfmon messages muted
[2025-06-04 07:36:11] 2025-06-04 11:36:10,904 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:36:11] 2025-06-04 11:36:10,954 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:36:11]  *** Error codes and diagnostics ***
[2025-06-04 07:36:11]     "exeErrorCode": 0,
[2025-06-04 07:36:11]     "exeErrorDiag": "",
[2025-06-04 07:36:11]     "pilotErrorCode": 0,
[2025-06-04 07:36:11]     "pilotErrorDiag": "",
[2025-06-04 07:36:11]  *** Listing of results directory ***
[2025-06-04 07:36:11] total 392888
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:36:11] -rwx------ 1 boincer umatlas     37140 Jun  4 01:31 runpilot2-wrapper.sh
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:31 queuedata.json
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:36:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:25 run_atlas
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:25 job.xml
[2025-06-04 07:36:11] -rw-r--r-- 2 boincer umatlas 215831549 Jun  4 06:25 EVNT.45006593._002145.pool.root.1
[2025-06-04 07:36:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:25 start_atlas.sh
[2025-06-04 07:36:11] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:25 shared
[2025-06-04 07:36:11] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 06:25 input.tar.gz
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:25 boinc_lockfile
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:25 pandaJob.out
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas    986812 Jun  4 06:26 agis_schedconf.cvmfs.json
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas   1603667 Jun  4 06:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:36:11] drwx------ 4 boincer umatlas      4096 Jun  4 06:26 pilot3
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas 181233457 Jun  4 07:34 HITS.45006595._053591.pool.root.1
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:35 boinc_task_state.xml
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas      1072 Jun  4 07:35 memory_monitor_summary.json
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas        95 Jun  4 07:35 pilot_heartbeat.json
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas    294767 Jun  4 07:35 log.45006595._053591.job.log.tgz.1
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas      7745 Jun  4 07:35 heartbeat.json
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas      6335 Jun  4 07:36 init_data.xml
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas      4353 Jun  4 07:36 pilotlog.txt
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:36 wrapper_checkpoint.txt
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:36 boinc_mmap_file
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas    415801 Jun  4 07:36 log.45006595._053591.job.log.1
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas       357 Jun  4 07:36 output.list
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:36 runtime_log
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas    727040 Jun  4 07:36 result.tar.gz
[2025-06-04 07:36:11] -rw------- 1 boincer umatlas       659 Jun  4 07:36 UIaKDmctvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPPnKDmpIY7Ro.diag
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 07:36 runtime_log.err
[2025-06-04 07:36:11] -rw-r--r-- 1 boincer umatlas     22462 Jun  4 07:36 stderr.txt
[2025-06-04 07:36:12] HITS file was successfully produced:
[2025-06-04 07:36:12] -rw------- 1 boincer umatlas 181233457 Jun  4 07:34 shared/HITS.pool.root.1
[2025-06-04 07:36:12]  *** Contents of shared directory: ***
[2025-06-04 07:36:12] total 388996
[2025-06-04 07:36:12] -rw-r--r-- 2 boincer umatlas 215831549 Jun  4 06:25 ATLAS.root_0
[2025-06-04 07:36:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:25 start_atlas.sh
[2025-06-04 07:36:12] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 06:25 input.tar.gz
[2025-06-04 07:36:12] -rw------- 1 boincer umatlas 181233457 Jun  4 07:34 HITS.pool.root.1
[2025-06-04 07:36:12] -rw------- 1 boincer umatlas    727040 Jun  4 07:36 result.tar.gz
07:36:13 (47623): run_atlas exited; CPU time 27390.675465
07:36:13 (47623): called boinc_finish(0)

</stderr_txt>
]]>

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