Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 11:35:34 (44136): Detected: vboxwrapper 26206
2025-06-06 11:35:35 (44136): Detected: BOINC client v8.0.2
2025-06-06 11:35:35 (44136): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-06 11:35:36 (44136): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 11:35:36 (44136): Create VM. (boinc_d71d6704a2cfe052, slot#2)
2025-06-06 11:35:37 (44136): Setting Memory Size for VM. (4800MB)
2025-06-06 11:35:37 (44136): Setting CPU Count for VM. (8)
2025-06-06 11:35:37 (44136): Setting Chipset Options for VM.
2025-06-06 11:35:37 (44136): Setting Graphics Controller Options for VM.
2025-06-06 11:35:38 (44136): Setting Boot Options for VM.
2025-06-06 11:35:38 (44136): Setting Network Configuration for NAT.
2025-06-06 11:35:38 (44136): Enabling VM Network Access.
2025-06-06 11:35:39 (44136): Disabling USB Support for VM.
2025-06-06 11:35:39 (44136): Disabling COM Port Support for VM.
2025-06-06 11:35:39 (44136): Disabling LPT Port Support for VM.
2025-06-06 11:35:39 (44136): Disabling Audio Support for VM.
2025-06-06 11:35:40 (44136): Disabling Clipboard Support for VM.
2025-06-06 11:35:40 (44136): Disabling Drag and Drop Support for VM.
2025-06-06 11:35:40 (44136): Adding storage controller(s) to VM.
2025-06-06 11:35:40 (44136): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 11:35:41 (44136): Adding VirtualBox Guest Additions to VM.
2025-06-06 11:35:41 (44136): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 11:35:41 (44136): forwarding host port 43372 to guest port 80
2025-06-06 11:35:42 (44136): Enabling remote desktop for VM.
2025-06-06 11:35:42 (44136): Required extension pack not installed, remote desktop not enabled.
2025-06-06 11:35:42 (44136): Enabling shared directory for VM.
2025-06-06 11:35:43 (44136): Starting VM using VBoxManage interface. (boinc_d71d6704a2cfe052, slot#2)
2025-06-06 11:35:53 (44136): Successfully started VM. (PID = '3000')
2025-06-06 11:35:53 (44136): Reporting VM Process ID to BOINC.
2025-06-06 11:35:53 (44136): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-06 11:35:53 (44136): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 11:35:53 (44136): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-06 11:35:53 (44136): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 11:35:53 (44136): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 11:35:53 (44136): Detected: Web Application Enabled (http://localhost:43372)
2025-06-06 11:35:53 (44136): Preference change detected
2025-06-06 11:35:53 (44136): Setting CPU throttle for VM. (25%)
2025-06-06 11:35:53 (44136): Setting checkpoint interval to 10000 seconds. (Higher value of (Preference: 10000 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 11:35:55 (44136): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 11:35:55 (44136): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 11:36:04 (44136): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 11:36:04 (44136): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 11:36:04 (44136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 11:36:23 (44136): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 11:36:23 (44136): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 11:36:49 (44136): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.000373 main     Log opened 2025-06-06T11:36:46.762289000Z
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.000642 main     OS Product: Linux
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.000739 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.000828 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.000918 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.000921 main     Process ID: 1367
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.000922 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 11:36:49 (44136): Guest Log: 00:00:00.002918 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 11:36:49 (44136): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 11:36:49 (44136): Guest Log: [INFO] Mounting shared directory
2025-06-06 11:36:49 (44136): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 11:36:59 (44136): Guest Log: 00:00:10.024048 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 435 140 000ns (GuestNow=1 749 231 418 203 515 000 ns GuestLast=1 749 209 806 768 375 000 ns fSetTimeLastLoop=true )
2025-06-06 11:37:01 (44136): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 11:37:01 (44136): Guest Log: [INFO] Detected branch: prod
2025-06-06 11:37:02 (44136): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 11:37:02 (44136): Guest Log: Copying input files
2025-06-06 11:37:06 (44136): Guest Log: Copied input files into RunAtlas.
2025-06-06 11:37:07 (44136): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 11:37:07 (44136): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 11:37:07 (44136): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 11:37:07 (44136): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 11:37:19 (44136): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 11:37:19 (44136): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 11:37:19 (44136): Guest Log: 2.6.3.0 1654 0 30168 146869 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 11:37:21 (44136): Guest Log: copied the webapp to /var/www
2025-06-06 11:37:21 (44136): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-06 11:37:21 (44136): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-06 11:37:22 (44136): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 11:37:22 (44136): Guest Log:  *** Starting ATLAS job. (PandaID=6678363419 taskID=45006595) ***
2025-06-06 13:15:55 (44136): Status Report: Elapsed Time: '6000.000000'
2025-06-06 13:15:55 (44136): Status Report: CPU Time: '6676.796875'
2025-06-06 13:18:56 (44136): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 13:19:16 (44136): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 14:13:48 (44136): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 14:14:08 (44136): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 14:19:20 (44136): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 14:19:40 (44136): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 14:57:01 (44136): Status Report: Elapsed Time: '12000.000000'
2025-06-06 14:57:01 (44136): Status Report: CPU Time: '21037.671875'
2025-06-06 16:37:07 (44136): Status Report: Elapsed Time: '18000.000000'
2025-06-06 16:37:07 (44136): Status Report: CPU Time: '35267.187500'
2025-06-06 16:46:52 (44136): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 16:47:12 (44136): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 17:24:40 (44136): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 17:25:01 (44136): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 17:29:22 (44136): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 17:29:42 (44136): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 18:18:14 (44136): Status Report: Elapsed Time: '24000.000000'
2025-06-06 18:18:14 (44136): Status Report: CPU Time: '49287.234375'
2025-06-06 19:28:54 (44136): VM state change detected. (old = 'running', new = 'paused')
2025-06-06 19:29:14 (44136): VM state change detected. (old = 'paused', new = 'running')
2025-06-06 19:58:38 (44136): Status Report: Elapsed Time: '30000.000000'
2025-06-06 19:58:38 (44136): Status Report: CPU Time: '63379.984375'
2025-06-06 21:38:41 (44136): Status Report: Elapsed Time: '36000.000000'
2025-06-06 21:38:41 (44136): Status Report: CPU Time: '76892.640625'
2025-06-06 21:46:51 (44136): Guest Log:  *** Job finished ***
2025-06-06 21:46:51 (44136): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:35,782 | INFO     | [data] copytool_out thread has finished
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:36,676 | INFO     | [job] queue monitor thread has finished
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:36,865 | INFO     | [data] queue_monitor thread has finished
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:37,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348812953408)>', '<ExcThread(monitor, started 140347686500096)>']
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:37,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:37,874 | INFO     | [monitor] control thread has ended
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,258 | INFO     | all workflow threads have been joined
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,259 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,259 | INFO     | traces error code: 0
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,618 [wrapper] ==== pilot stdout END ====
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,629 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,637 [wrapper] pilotpid: 6031
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:42,646 [wrapper] Pilot exit status: 0
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:43,330 [wrapper] pandaids: 6678363419
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:43,400 [wrapper] cleanup supervisor_pilot  5202 6032
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:43,410 [wrapper] Test setup, not cleaning
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:43,421 [wrapper] apfmon messages muted
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:43,432 [wrapper] ==== wrapper stdout END ====
2025-06-06 21:46:51 (44136): Guest Log: 2025-06-07 03:44:43,449 [wrapper] ==== wrapper stderr END ====
2025-06-06 21:46:51 (44136): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 21:46:51 (44136): Guest Log:     "exeErrorCode": 0,
2025-06-06 21:46:51 (44136): Guest Log:     "exeErrorDiag": "",
2025-06-06 21:46:51 (44136): Guest Log:     "pilotErrorCode": 0,
2025-06-06 21:46:51 (44136): Guest Log:     "pilotErrorDiag": "",
2025-06-06 21:46:51 (44136): Guest Log:  *** Listing of results directory ***
2025-06-06 21:46:51 (44136): Guest Log: total 181044
2025-06-06 21:46:51 (44136): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:58 pilot3.tar.gz
2025-06-06 21:46:51 (44136): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 05:19 queuedata.json
2025-06-06 21:46:51 (44136): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 05:20 runpilot2-wrapper.sh
2025-06-06 21:46:51 (44136): Guest Log: -rwxr-xr-x. 1 atlas atlas      9043 Jun  6 17:37 init_data.xml
2025-06-06 21:46:51 (44136): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 Jun  6 17:37 input.tar.gz
2025-06-06 21:46:51 (44136): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 17:37 start_atlas.sh
2025-06-06 21:46:51 (44136): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 17:37 EVNT.45006593._002140.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 21:46:51 (44136): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Jun  6 17:37 pandaJob.out
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas    985748 Jun  6 17:41 agis_schedconf.cvmfs.json
2025-06-06 21:46:51 (44136): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 17:42 pilot3
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas 176769333 Jun  7 03:41 HITS.45006595._053459.pool.root.1
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas        95 Jun  7 03:43 pilot_heartbeat.json
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  7 03:43 memory_monitor_summary.json
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  7 03:43 agis_ddmendpoints.agis.ALL.json
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas    487770 Jun  7 03:43 log.45006595._053459.job.log.tgz.1
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas      7734 Jun  7 03:44 heartbeat.json
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas      4722 Jun  7 03:44 pilotlog.txt
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas   1937189 Jun  7 03:44 log.45006595._053459.job.log.1
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas       357 Jun  7 03:44 output.list
2025-06-06 21:46:51 (44136): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  7 03:44 runtime_log
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas   2447360 Jun  7 03:44 result.tar.gz
2025-06-06 21:46:51 (44136): Guest Log: -rw-r--r--. 1 atlas atlas      8623 Jun  7 03:44 runtime_log.err
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas       670 Jun  7 03:44 8wdLDmgjvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPNnKDmncIaTo.diag
2025-06-06 21:46:51 (44136): Guest Log: Looking for outputfile HITS.45006595._053459.pool.root.1
2025-06-06 21:46:51 (44136): Guest Log: HITS file was successfully produced
2025-06-06 21:46:51 (44136): Guest Log: -rw-------. 1 atlas atlas 176769333 Jun  7 03:41 /home/atlas/RunAtlas/HITS.45006595._053459.pool.root.1
2025-06-06 21:46:55 (44136): Guest Log: Successfully finished the ATLAS job!
2025-06-06 21:46:55 (44136): Guest Log: Copying the results back to the shared directory!
2025-06-06 21:46:56 (44136): Guest Log:  *** Contents of shared directory: ***
2025-06-06 21:46:56 (44136): Guest Log: total 388324
2025-06-06 21:46:56 (44136): Guest Log: -rwxrwxrwx. 1 root root 217880206 Jun  6 17:35 ATLAS.root_0
2025-06-06 21:46:56 (44136): Guest Log: -rwxrwxrwx. 1 root root 176769333 Jun  7  2025 HITS.pool.root.1
2025-06-06 21:46:56 (44136): Guest Log: -rwxrwxrwx. 1 root root      9043 Jun  6 17:35 init_data.xml
2025-06-06 21:46:56 (44136): Guest Log: -rwxrwxrwx. 1 root root    508881 Jun  4 10:33 input.tar.gz
2025-06-06 21:46:56 (44136): Guest Log: -rwxrwxrwx. 1 root root   2447360 Jun  7  2025 result.tar.gz
2025-06-06 21:46:56 (44136): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 10:33 start_atlas.sh
2025-06-06 21:46:56 (44136): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 21:46:56 (44136): VM Completion File Detected.
2025-06-06 21:46:56 (44136): Powering off VM.
2025-06-06 21:46:57 (44136): Successfully stopped VM.
2025-06-06 21:46:57 (44136): Deregistering VM. (boinc_d71d6704a2cfe052, slot#2)
2025-06-06 21:46:57 (44136): Removing network bandwidth throttle group from VM.
2025-06-06 21:46:58 (44136): Removing VM from VirtualBox.
21:47:03 (44136): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN