Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:51 (29803): wrapper (7.7.26015): starting
06:40:51 (29803): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:40:51] Arguments: --nthreads 12
[2025-06-04 06:40:51] Threads: 12
[2025-06-04 06:40:51] Checking for CVMFS
[2025-06-04 06:40:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:40:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:40:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:40:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:40:51] 2.11.2.0 2914 35574 85204 146777 2 58 18596372 20275201 1 130560 0 15969340 99.983 6254865 7647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:40:51] CVMFS is ok
[2025-06-04 06:40:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:40:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:40:51] Further information can be found at the LHC@home message board.
[2025-06-04 06:40:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:40:51] Checking for apptainer binary...
[2025-06-04 06:40:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:40:51] Running /usr/bin/apptainer --version
[2025-06-04 06:40:51] apptainer version 1.3.2-1.el7
[2025-06-04 06:40:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:40:53] c-205-5.aglt2.org
[2025-06-04 06:40:53] apptainer works
[2025-06-04 06:40:53] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:40:53] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:40:53] Starting ATLAS job with PandaID=6678314031
[2025-06-04 06:40:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:43:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:43:52]  filetype=log
[2025-06-04 07:43:52]  guid=62c0c9e2-eabc-4617-a3b4-cf4b4031f344
[2025-06-04 07:43:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:43:52]  is_altstaged=None
[2025-06-04 07:43:52]  is_tar=False
[2025-06-04 07:43:52]  lfn=log.45006595._052916.job.log.tgz.1
[2025-06-04 07:43:52]  mtime=0
[2025-06-04 07:43:52]  protocol_id=None
[2025-06-04 07:43:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:43:52]  replicas=None
[2025-06-04 07:43:52]  scope=mc23_13p6TeV
[2025-06-04 07:43:52]  status=None
[2025-06-04 07:43:52]  status_code=0
[2025-06-04 07:43:52]  storage_token=
[2025-06-04 07:43:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678314031/log.45006595._052916.job.log.tgz.1
[2025-06-04 07:43:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/e3/log.45006595._052916.job.log.tgz.1
[2025-06-04 07:43:52]  workdir=None
[2025-06-04 07:43:52] ]
[2025-06-04 07:43:52] 2025-06-04 11:43:26,477 | INFO     | transferring file log.45006595._052916.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678314031/log.45006595._052916.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:43:52] 2025-06-04 11:43:26,477 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678314031/log.45006595._052916.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052916.job
[2025-06-04 07:43:52] 2025-06-04 11:43:26,502 | INFO     | adding to output.list: log.45006595._052916.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/e3/log.45006595._052916.job.log.tg
[2025-06-04 07:43:52] 2025-06-04 11:43:26,504 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:43:52] 2025-06-04 11:43:26,504 | INFO     | summary of transferred files:
[2025-06-04 07:43:52] 2025-06-04 11:43:26,504 | INFO     |  -- lfn=log.45006595._052916.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:43:52] 2025-06-04 11:43:26,504 | INFO     | stage-out finished correctly
[2025-06-04 07:43:52] 2025-06-04 11:43:27,636 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:43:52] 2025-06-04 11:43:27,718 | INFO     | job 6678314031 has state=finished
[2025-06-04 07:43:52] 2025-06-04 11:43:27,718 | INFO     | preparing for final server update for job 6678314031 in state='finished'
[2025-06-04 07:43:52] 2025-06-04 11:43:27,718 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:43:52] 2025-06-04 11:43:27,719 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:43:52] 2025-06-04 11:43:27,719 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:43:52] 2025-06-04 11:43:27,719 | INFO     | job 6678314031 has finished - writing final server update
[2025-06-04 07:43:52] 2025-06-04 11:43:27,719 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:43:52] 2025-06-04 11:43:27,721 | INFO     | executing command: lscpu
[2025-06-04 07:43:52] 2025-06-04 11:43:27,747 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:43:52] 2025-06-04 11:43:31,026 | INFO     | PID=983 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-04 07:43:52] 2025-06-04 11:43:31,841 | WARNING  | process 7590 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:43:52] 2025-06-04 11:43:31,841 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678314031/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:43:52] 2025-06-04 11:43:31,929 | INFO     | number of running child processes to parent process 7590: 1
[2025-06-04 07:43:52] 2025-06-04 11:43:31,929 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:43:52] 2025-06-04 11:43:32,451 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 07:43:52] 2025-06-04 11:43:32,451 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678314031/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:43:52] 2025-06-04 11:43:32,452 | INFO     | extracted standard info from prmon json
[2025-06-04 07:43:52] 2025-06-04 11:43:32,452 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:43:52] 2025-06-04 11:43:32,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:43:52] 2025-06-04 11:43:32,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:43:52] 2025-06-04 11:43:32,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:43:52] 2025-06-04 11:43:32,455 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:43:52] 2025-06-04 11:43:32,455 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 07:43:52] 2025-06-04 11:43:32,455 | INFO     | sum of deviations: -5445694296.999999
[2025-06-04 07:43:52] 2025-06-04 11:43:32,456 | INFO     | mean x: 1749035619.5
[2025-06-04 07:43:52] 2025-06-04 11:43:32,456 | INFO     | mean y: 2766247.925925926
[2025-06-04 07:43:52] 2025-06-04 11:43:32,456 | INFO     | -- intersect: 195140460489.11655
[2025-06-04 07:43:52] 2025-06-04 11:43:32,456 | INFO     | intersect: 195140460489.11655
[2025-06-04 07:43:52] 2025-06-04 11:43:32,456 | INFO     | chi2: 0.04178292394668148
[2025-06-04 07:43:52] 2025-06-04 11:43:32,457 | INFO     | -- intersect: 195140460489.11655
[2025-06-04 07:43:52] 2025-06-04 11:43:32,457 | INFO     | current memory leak: -111.57 B/s (using 54 data points, chi2=0.04)
[2025-06-04 07:43:52] 2025-06-04 11:43:32,457 | INFO     | ..............................
[2025-06-04 07:43:52] 2025-06-04 11:43:32,457 | INFO     | . Timing measurements:
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | . get job = 0 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | . initial setup = 2 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | . payload setup = 9 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | . stage-in = 0 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | . payload execution = 3709 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | . stage-out = 0 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | . log creation = 0 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,458 | INFO     | ..............................
[2025-06-04 07:43:52] 2025-06-04 11:43:32,763 | INFO     | 
[2025-06-04 07:43:52] 2025-06-04 11:43:32,763 | INFO     | job summary report
[2025-06-04 07:43:52] 2025-06-04 11:43:32,763 | INFO     | --------------------------------------------------
[2025-06-04 07:43:52] 2025-06-04 11:43:32,763 | INFO     | PanDA job id: 6678314031
[2025-06-04 07:43:52] 2025-06-04 11:43:32,764 | INFO     | task id: 45006595
[2025-06-04 07:43:52] 2025-06-04 11:43:32,764 | INFO     | errors: (none)
[2025-06-04 07:43:52] 2025-06-04 11:43:32,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:43:52] 2025-06-04 11:43:32,764 | INFO     | pilot state: finished 
[2025-06-04 07:43:52] 2025-06-04 11:43:32,764 | INFO     | transexitcode: 0
[2025-06-04 07:43:52] 2025-06-04 11:43:32,764 | INFO     | exeerrorcode: 0
[2025-06-04 07:43:52] 2025-06-04 11:43:32,765 | INFO     | exeerrordiag: 
[2025-06-04 07:43:52] 2025-06-04 11:43:32,765 | INFO     | exitcode: 0
[2025-06-04 07:43:52] 2025-06-04 11:43:32,765 | INFO     | exitmsg: OK
[2025-06-04 07:43:52] 2025-06-04 11:43:32,765 | INFO     | cpuconsumptiontime: 40255 s
[2025-06-04 07:43:52] 2025-06-04 11:43:32,765 | INFO     | nevents: 400
[2025-06-04 07:43:52] 2025-06-04 11:43:32,765 | INFO     | neventsw: 0
[2025-06-04 07:43:52] 2025-06-04 11:43:32,765 | INFO     | pid: 7590
[2025-06-04 07:43:52] 2025-06-04 11:43:32,766 | INFO     | pgrp: 7590
[2025-06-04 07:43:52] 2025-06-04 11:43:32,766 | INFO     | corecount: 12
[2025-06-04 07:43:52] 2025-06-04 11:43:32,766 | INFO     | event service: False
[2025-06-04 07:43:52] 2025-06-04 11:43:32,766 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3722: 2431069, 3723: 2431068, 3724: 2440065, 3725: 2440249, 3730: 2440419}
[2025-06-04 07:43:52] 2025-06-04 11:43:32,766 | INFO     | --------------------------------------------------
[2025-06-04 07:43:52] 2025-06-04 11:43:32,766 | INFO     | 
[2025-06-04 07:43:52] 2025-06-04 11:43:32,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:43:52] 2025-06-04 11:43:32,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:43:52] 2025-06-04 11:43:32,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:43:52] 2025-06-04 11:43:32,795 | INFO     | job 6678314031 has completed (purged errors)
[2025-06-04 07:43:52] 2025-06-04 11:43:32,795 | INFO     | overall cleanup function is called
[2025-06-04 07:43:52] 2025-06-04 11:43:33,803 | INFO     | --- collectZombieJob: --- 10, [7590]
[2025-06-04 07:43:52] 2025-06-04 11:43:33,803 | INFO     | zombie collector waiting for pid 7590
[2025-06-04 07:43:52] 2025-06-04 11:43:33,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:43:52] 2025-06-04 11:43:33,804 | INFO     | collected zombie processes
[2025-06-04 07:43:52] 2025-06-04 11:43:33,804 | INFO     | will attempt to kill all subprocesses of pid=7590
[2025-06-04 07:43:52] 2025-06-04 11:43:33,892 | INFO     | process IDs to be killed: [7590] (in reverse order)
[2025-06-04 07:43:52] 2025-06-04 11:43:33,943 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:43:52] 2025-06-04 11:43:33,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:43:52] 2025-06-04 11:43:33,954 | INFO     | did not find any defunct processes belonging to 7590
[2025-06-04 07:43:52] 2025-06-04 11:43:33,956 | INFO     | did not find any defunct processes belonging to 7590
[2025-06-04 07:43:52] 2025-06-04 11:43:33,956 | INFO     | ready for new job
[2025-06-04 07:43:52] 2025-06-04 11:43:33,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:43:52] 2025-06-04 11:43:33,957 | INFO     | **************************************
[2025-06-04 07:43:52] 2025-06-04 11:43:33,957 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:43:52] 2025-06-04 11:43:33,957 | INFO     | **************************************
[2025-06-04 07:43:52] 2025-06-04 11:43:33,958 | INFO     | 
[2025-06-04 07:43:52] 2025-06-04 11:43:33,958 | INFO     | architecture information:
[2025-06-04 07:43:52] 2025-06-04 11:43:33,959 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:43:52] 2025-06-04 11:43:33,974 | INFO     | cat /etc/os-release:
[2025-06-04 07:43:52] NAME="CentOS Linux"
[2025-06-04 07:43:52] VERSION="7 (Core)"
[2025-06-04 07:43:52] ID="centos"
[2025-06-04 07:43:52] ID_LIKE="rhel fedora"
[2025-06-04 07:43:52] VERSION_ID="7"
[2025-06-04 07:43:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:43:52] ANSI_COLOR="0;31"
[2025-06-04 07:43:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:43:52] HOME_URL="https://www.centos.org/"
[2025-06-04 07:43:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:43:52] 
[2025-06-04 07:43:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:43:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:43:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:43:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:43:52] 
[2025-06-04 07:43:52] 2025-06-04 11:43:33,975 | INFO     | **************************************
[2025-06-04 07:43:52] 2025-06-04 11:43:34,477 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:43:52] 2025-06-04 11:43:34,494 | INFO     | sufficient remaining disk space (29423042560 B)
[2025-06-04 07:43:52] 2025-06-04 11:43:34,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:43:52] 2025-06-04 11:43:34,495 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:43:52] 2025-06-04 11:43:34,495 | INFO     | update_server=False
[2025-06-04 07:43:52] 2025-06-04 11:43:34,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:43:52] 2025-06-04 11:43:34,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:43:52] 2025-06-04 11:43:34,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:43:52] 2025-06-04 11:43:34,522 | INFO     | all job control threads have been joined
[2025-06-04 07:43:52] 2025-06-04 11:43:34,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:43:52] 2025-06-04 11:43:35,021 | INFO     | all payload control threads have been joined
[2025-06-04 07:43:52] 2025-06-04 11:43:35,026 | INFO     | all data control threads have been joined
[2025-06-04 07:43:52] 2025-06-04 11:43:35,037 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:43:52] 2025-06-04 11:43:35,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:43:52] 2025-06-04 11:43:35,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:43:52] 2025-06-04 11:43:35,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:43:52] 2025-06-04 11:43:35,437 | INFO     | aborting loop
[2025-06-04 07:43:52] 2025-06-04 11:43:35,501 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:35,501 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:35,529 | INFO     | [job] control thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:35,680 | INFO     | [job] validate thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:35,795 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:35,831 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,026 | INFO     | [payload] control thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,031 | INFO     | [data] control thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,276 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,377 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,443 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,527 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,609 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:36,733 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:38,501 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:44,554 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:43:52] 2025-06-04 11:43:45,559 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:43:52] 2025-06-04 11:43:47,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113474168640)>', '<ExcThread(monitor, started 140112906155776)>']
[2025-06-04 07:43:52] 2025-06-04 11:43:48,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:43:52] 2025-06-04 11:43:48,099 | INFO     | [monitor] control thread has ended
[2025-06-04 07:43:52] 2025-06-04 11:43:52,486 | INFO     | all workflow threads have been joined
[2025-06-04 07:43:52] 2025-06-04 11:43:52,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:43:52] 2025-06-04 11:43:52,487 | INFO     | traces error code: 0
[2025-06-04 07:43:52] 2025-06-04 11:43:52,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:43:52] 2025-06-04 11:43:52,586 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:43:52] 2025-06-04 11:43:52,590 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:43:52] 2025-06-04 11:43:52,594 [wrapper] pilotpid: 983
[2025-06-04 07:43:52] 2025-06-04 11:43:52,597 [wrapper] Pilot exit status: 0
[2025-06-04 07:43:52] 2025-06-04 11:43:52,614 [wrapper] pandaids: 6678314031
[2025-06-04 07:43:52] 2025-06-04 11:43:52,654 [wrapper] cleanup supervisor_pilot 20228 984
[2025-06-04 07:43:52] 2025-06-04 11:43:52,658 [wrapper] Test setup, not cleaning
[2025-06-04 07:43:52] 2025-06-04 11:43:52,663 [wrapper] apfmon messages muted
[2025-06-04 07:43:52] 2025-06-04 11:43:52,667 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:43:52] 2025-06-04 11:43:52,670 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:43:52]  *** Error codes and diagnostics ***
[2025-06-04 07:43:52]     "exeErrorCode": 0,
[2025-06-04 07:43:52]     "exeErrorDiag": "",
[2025-06-04 07:43:52]     "pilotErrorCode": 0,
[2025-06-04 07:43:52]     "pilotErrorDiag": "",
[2025-06-04 07:43:52]  *** Listing of results directory ***
[2025-06-04 07:43:52] total 386240
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:43:52] -rwx------ 1 boincer umatlas     37140 Jun  4 01:07 runpilot2-wrapper.sh
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:07 queuedata.json
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:43:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:40 run_atlas
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:40 job.xml
[2025-06-04 07:43:52] -rw-r--r-- 2 boincer umatlas 214492542 Jun  4 06:40 EVNT.45006593._002119.pool.root.1
[2025-06-04 07:43:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:40 start_atlas.sh
[2025-06-04 07:43:52] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:40 shared
[2025-06-04 07:43:52] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:40 input.tar.gz
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:40 boinc_lockfile
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:40 pandaJob.out
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas    986812 Jun  4 06:41 agis_schedconf.cvmfs.json
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas   1603667 Jun  4 06:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:43:52] drwx------ 4 boincer umatlas      4096 Jun  4 06:41 pilot3
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 07:39 init_data.xml
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas        95 Jun  4 07:42 pilot_heartbeat.json
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas 175728496 Jun  4 07:42 HITS.45006595._052916.pool.root.1
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas       530 Jun  4 07:43 boinc_task_state.xml
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas      1047 Jun  4 07:43 memory_monitor_summary.json
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas    355936 Jun  4 07:43 log.45006595._052916.job.log.tgz.1
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas      7751 Jun  4 07:43 heartbeat.json
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:43 boinc_mmap_file
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:43 wrapper_checkpoint.txt
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas      4425 Jun  4 07:43 pilotlog.txt
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas    368775 Jun  4 07:43 log.45006595._052916.job.log.1
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas       357 Jun  4 07:43 output.list
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:43 runtime_log
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas    747520 Jun  4 07:43 result.tar.gz
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 07:43 runtime_log.err
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas       658 Jun  4 07:43 El9MDmzWvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSInKDm8wjmJo.diag
[2025-06-04 07:43:52] -rw-r--r-- 1 boincer umatlas     21259 Jun  4 07:43 stderr.txt
[2025-06-04 07:43:52] HITS file was successfully produced:
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas 175728496 Jun  4 07:42 shared/HITS.pool.root.1
[2025-06-04 07:43:52]  *** Contents of shared directory: ***
[2025-06-04 07:43:52] total 382332
[2025-06-04 07:43:52] -rw-r--r-- 2 boincer umatlas 214492542 Jun  4 06:40 ATLAS.root_0
[2025-06-04 07:43:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:40 start_atlas.sh
[2025-06-04 07:43:52] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 06:40 input.tar.gz
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas 175728496 Jun  4 07:42 HITS.pool.root.1
[2025-06-04 07:43:52] -rw------- 1 boincer umatlas    747520 Jun  4 07:43 result.tar.gz
07:43:54 (29803): run_atlas exited; CPU time 40234.339139
07:43:54 (29803): called boinc_finish(0)

</stderr_txt>
]]>

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