Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:21:52 (3963500): wrapper (7.7.26015): starting
06:21:52 (3963500): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:21:52] Arguments: --nthreads 8
[2025-06-04 06:21:52] Threads: 8
[2025-06-04 06:21:52] Checking for CVMFS
[2025-06-04 06:21:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:21:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:21:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:21:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:21:52] 2.12.6.0 5013 37185 644936 146777 3 73 31740651 32935937 11506 16776704 1 531206719 99.687 415280127 36145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:21:52] CVMFS is ok
[2025-06-04 06:21:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:21:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:21:52] Further information can be found at the LHC@home message board.
[2025-06-04 06:21:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:21:52] Checking for apptainer binary...
[2025-06-04 06:21:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:21:52] Running /usr/bin/apptainer --version
[2025-06-04 06:21:52] apptainer version 1.4.1-1.el9
[2025-06-04 06:21:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:21:52] c7-9-15.aglt2.org
[2025-06-04 06:21:52] apptainer works
[2025-06-04 06:21:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:21:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:21:52] Starting ATLAS job with PandaID=6678363403
[2025-06-04 06:21:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:59:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:59:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 06:59:18]  is_altstaged=None
[2025-06-04 06:59:18]  is_tar=False
[2025-06-04 06:59:18]  lfn=log.45006595._053443.job.log.tgz.1
[2025-06-04 06:59:18]  mtime=0
[2025-06-04 06:59:18]  protocol_id=None
[2025-06-04 06:59:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:59:18]  replicas=None
[2025-06-04 06:59:18]  scope=mc23_13p6TeV
[2025-06-04 06:59:18]  status=None
[2025-06-04 06:59:18]  status_code=0
[2025-06-04 06:59:18]  storage_token=
[2025-06-04 06:59:18]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678363403/log.45006595._053443.job.log.tgz.1
[2025-06-04 06:59:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/6c/log.45006595._053443.job.log.tgz.1
[2025-06-04 06:59:18]  workdir=None
[2025-06-04 06:59:18] ]
[2025-06-04 06:59:18] 2025-06-04 10:58:54,254 | INFO     | transferring file log.45006595._053443.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678363403/log.45006595._053443.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 06:59:18] 2025-06-04 10:58:54,254 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678363403/log.45006595._053443.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._053443.job
[2025-06-04 06:59:18] 2025-06-04 10:58:54,270 | INFO     | adding to output.list: log.45006595._053443.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/6c/log.45006595._053443.job.log.tg
[2025-06-04 06:59:18] 2025-06-04 10:58:54,270 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:59:18] 2025-06-04 10:58:54,270 | INFO     | summary of transferred files:
[2025-06-04 06:59:18] 2025-06-04 10:58:54,270 | INFO     |  -- lfn=log.45006595._053443.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:59:18] 2025-06-04 10:58:54,270 | INFO     | stage-out finished correctly
[2025-06-04 06:59:18] 2025-06-04 10:58:57,436 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:59:18] 2025-06-04 10:58:57,489 | INFO     | job 6678363403 has state=finished
[2025-06-04 06:59:18] 2025-06-04 10:58:57,490 | INFO     | preparing for final server update for job 6678363403 in state='finished'
[2025-06-04 06:59:18] 2025-06-04 10:58:57,490 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:59:18] 2025-06-04 10:58:57,490 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:59:18] 2025-06-04 10:58:57,490 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:59:18] 2025-06-04 10:58:57,490 | INFO     | job 6678363403 has finished - writing final server update
[2025-06-04 06:59:18] 2025-06-04 10:58:57,490 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:59:18] 2025-06-04 10:58:57,506 | INFO     | executing command: lscpu
[2025-06-04 06:59:18] 2025-06-04 10:58:57,585 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:59:18] 2025-06-04 10:58:57,908 | INFO     | PID=3969887 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 06:59:18] 2025-06-04 10:58:57,908 | INFO     | .. there are 19 such processes running
[2025-06-04 06:59:18] 2025-06-04 10:58:59,983 | WARNING  | process 3982456 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 06:59:18] 2025-06-04 10:58:59,983 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678363403/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:59:18] 2025-06-04 10:59:00,184 | INFO     | number of running child processes to parent process 3982456: 1
[2025-06-04 06:59:18] 2025-06-04 10:59:00,185 | INFO     | maximum number of monitored processes: 6
[2025-06-04 06:59:18] 2025-06-04 10:59:00,277 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 06:59:18] 2025-06-04 10:59:00,277 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678363403/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:59:18] 2025-06-04 10:59:00,277 | INFO     | extracted standard info from prmon json
[2025-06-04 06:59:18] 2025-06-04 10:59:00,277 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:59:18] 2025-06-04 10:59:00,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | sum of square deviations: 7553630.0
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | sum of deviations: 2635985680.0
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | mean x: 1749033700.0
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | mean y: 2199680.3448275863
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | -- intersect: -610357029860.6064
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | intersect: -610357029860.6064
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | chi2: 0.5420559132822598
[2025-06-04 06:59:18] 2025-06-04 10:59:00,278 | INFO     | -- intersect: -610357029860.6064
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | current memory leak: 348.97 B/s (using 29 data points, chi2=0.54)
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | ..............................
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . Timing measurements:
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . get job = 0 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . initial setup = 2 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . payload setup = 3 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . stage-in = 0 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . payload execution = 2192 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . stage-out = 0 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | . log creation = 0 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,279 | INFO     | ..............................
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | 
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | job summary report
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | --------------------------------------------------
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | PanDA job id: 6678363403
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | task id: 45006595
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | errors: (none)
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | pilot state: finished 
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | transexitcode: 0
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | exeerrorcode: 0
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | exeerrordiag: 
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | exitcode: 0
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | exitmsg: OK
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | cpuconsumptiontime: 13442 s
[2025-06-04 06:59:18] 2025-06-04 10:59:00,310 | INFO     | nevents: 400
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | neventsw: 0
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | pid: 3982456
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | pgrp: 3982456
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | corecount: 8
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | event service: False
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | sizes: {0: 2405185, 3: 2405391, 11: 2405419, 2199: 2430465, 2200: 2439461, 2204: 2439461, 2206: 2439759}
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | --------------------------------------------------
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | 
[2025-06-04 06:59:18] 2025-06-04 10:59:00,311 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:59:18] 2025-06-04 10:59:00,327 | INFO     | job 6678363403 has completed (purged errors)
[2025-06-04 06:59:18] 2025-06-04 10:59:00,328 | INFO     | overall cleanup function is called
[2025-06-04 06:59:18] 2025-06-04 10:59:01,334 | INFO     | --- collectZombieJob: --- 10, [3982456]
[2025-06-04 06:59:18] 2025-06-04 10:59:01,334 | INFO     | zombie collector waiting for pid 3982456
[2025-06-04 06:59:18] 2025-06-04 10:59:01,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:59:18] 2025-06-04 10:59:01,335 | INFO     | collected zombie processes
[2025-06-04 06:59:18] 2025-06-04 10:59:01,335 | INFO     | will attempt to kill all subprocesses of pid=3982456
[2025-06-04 06:59:18] 2025-06-04 10:59:01,522 | INFO     | process IDs to be killed: [3982456] (in reverse order)
[2025-06-04 06:59:18] 2025-06-04 10:59:01,611 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:59:18] 2025-06-04 10:59:01,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:59:18] 2025-06-04 10:59:01,625 | INFO     | did not find any defunct processes belonging to 3982456
[2025-06-04 06:59:18] 2025-06-04 10:59:01,636 | INFO     | did not find any defunct processes belonging to 3982456
[2025-06-04 06:59:18] 2025-06-04 10:59:01,636 | INFO     | ready for new job
[2025-06-04 06:59:18] 2025-06-04 10:59:01,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:59:18] 2025-06-04 10:59:01,637 | INFO     | **************************************
[2025-06-04 06:59:18] 2025-06-04 10:59:01,637 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:59:18] 2025-06-04 10:59:01,637 | INFO     | **************************************
[2025-06-04 06:59:18] 2025-06-04 10:59:01,637 | INFO     | 
[2025-06-04 06:59:18] 2025-06-04 10:59:01,642 | INFO     | architecture information:
[2025-06-04 06:59:18] 2025-06-04 10:59:01,642 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:59:18] 2025-06-04 10:59:01,654 | INFO     | cat /etc/os-release:
[2025-06-04 06:59:18] NAME="CentOS Linux"
[2025-06-04 06:59:18] VERSION="7 (Core)"
[2025-06-04 06:59:18] ID="centos"
[2025-06-04 06:59:18] ID_LIKE="rhel fedora"
[2025-06-04 06:59:18] VERSION_ID="7"
[2025-06-04 06:59:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:59:18] ANSI_COLOR="0;31"
[2025-06-04 06:59:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:59:18] HOME_URL="https://www.centos.org/"
[2025-06-04 06:59:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:59:18] 
[2025-06-04 06:59:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:59:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:59:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:59:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:59:18] 
[2025-06-04 06:59:18] 2025-06-04 10:59:01,654 | INFO     | **************************************
[2025-06-04 06:59:18] 2025-06-04 10:59:02,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 06:59:18] 2025-06-04 10:59:02,170 | INFO     | sufficient remaining disk space (74902929408 B)
[2025-06-04 06:59:18] 2025-06-04 10:59:02,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:59:18] 2025-06-04 10:59:02,170 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:59:18] 2025-06-04 10:59:02,170 | INFO     | update_server=False
[2025-06-04 06:59:18] 2025-06-04 10:59:02,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:59:18] 2025-06-04 10:59:02,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:59:18] 2025-06-04 10:59:02,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:59:18] 2025-06-04 10:59:02,171 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:59:18] 2025-06-04 10:59:02,171 | INFO     | aborting loop
[2025-06-04 06:59:18] 2025-06-04 10:59:02,172 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:59:18] 2025-06-04 10:59:02,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:59:18] 2025-06-04 10:59:02,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:59:18] 2025-06-04 10:59:02,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:59:18] 2025-06-04 10:59:02,480 | INFO     | all data control threads have been joined
[2025-06-04 06:59:18] 2025-06-04 10:59:03,175 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,177 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,177 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,333 | INFO     | all payload control threads have been joined
[2025-06-04 06:59:18] 2025-06-04 10:59:03,343 | INFO     | all job control threads have been joined
[2025-06-04 06:59:18] 2025-06-04 10:59:03,363 | INFO     | [job] validate thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,486 | INFO     | [data] control thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,486 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,490 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:59:18] 2025-06-04 10:59:03,531 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:03,924 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:04,338 | INFO     | [payload] control thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:04,339 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:04,348 | INFO     | [job] control thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:04,468 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:04,591 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:07,501 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:12,479 | INFO     | job.realtimelogging is not enabled
[2025-06-04 06:59:18] 2025-06-04 10:59:13,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:59:18] 2025-06-04 10:59:13,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074326280000)>', '<ExcThread(monitor, started 140073681008384)>']
[2025-06-04 06:59:18] 2025-06-04 10:59:14,232 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:59:18] 2025-06-04 10:59:14,232 | INFO     | [monitor] control thread has ended
[2025-06-04 06:59:18] 2025-06-04 10:59:18,713 | INFO     | all workflow threads have been joined
[2025-06-04 06:59:18] 2025-06-04 10:59:18,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:59:18] 2025-06-04 10:59:18,714 | INFO     | traces error code: 0
[2025-06-04 06:59:18] 2025-06-04 10:59:18,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:59:18] 2025-06-04 10:59:18,770 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:59:18] 2025-06-04 10:59:18,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:59:18] 2025-06-04 10:59:18,774 [wrapper] pilotpid: 3969887
[2025-06-04 06:59:18] 2025-06-04 10:59:18,775 [wrapper] Pilot exit status: 0
[2025-06-04 06:59:18] 2025-06-04 10:59:18,782 [wrapper] pandaids: 6678363403
[2025-06-04 06:59:18] 2025-06-04 10:59:18,838 [wrapper] cleanup supervisor_pilot 4094118 3969889
[2025-06-04 06:59:18] 2025-06-04 10:59:18,840 [wrapper] Test setup, not cleaning
[2025-06-04 06:59:18] 2025-06-04 10:59:18,842 [wrapper] apfmon messages muted
[2025-06-04 06:59:18] 2025-06-04 10:59:18,843 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:59:18] 2025-06-04 10:59:18,845 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:59:18]  *** Error codes and diagnostics ***
[2025-06-04 06:59:18]     "exeErrorCode": 0,
[2025-06-04 06:59:18]     "exeErrorDiag": "",
[2025-06-04 06:59:18]     "pilotErrorCode": 0,
[2025-06-04 06:59:18]     "pilotErrorDiag": "",
[2025-06-04 06:59:18]  *** Listing of results directory ***
[2025-06-04 06:59:18] total 389652
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:22 queuedata.json
[2025-06-04 06:59:18] -rwx------. 1 boincer umatlas     37140 Jun  4 01:24 runpilot2-wrapper.sh
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:59:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:21 run_atlas
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:21 job.xml
[2025-06-04 06:59:18] -rw-r--r--. 2 boincer umatlas 215787374 Jun  4 06:21 EVNT.45006593._002139.pool.root.1
[2025-06-04 06:59:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:21 start_atlas.sh
[2025-06-04 06:59:18] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:21 shared
[2025-06-04 06:59:18] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 06:21 input.tar.gz
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:21 boinc_lockfile
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas      2526 Jun  4 06:21 pandaJob.out
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas    986812 Jun  4 06:21 agis_schedconf.cvmfs.json
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:59:18] drwx------. 4 boincer umatlas      4096 Jun  4 06:22 pilot3
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 06:54 init_data.xml
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas 178334536 Jun  4 06:58 HITS.45006595._053443.pool.root.1
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas       529 Jun  4 06:58 boinc_task_state.xml
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas        95 Jun  4 06:58 pilot_heartbeat.json
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas      1027 Jun  4 06:58 memory_monitor_summary.json
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas    277753 Jun  4 06:58 log.45006595._053443.job.log.tgz.1
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas      7684 Jun  4 06:59 heartbeat.json
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 06:59 boinc_mmap_file
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas        27 Jun  4 06:59 wrapper_checkpoint.txt
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas      4548 Jun  4 06:59 pilotlog.txt
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas    247725 Jun  4 06:59 log.45006595._053443.job.log.1
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas       357 Jun  4 06:59 output.list
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas       620 Jun  4 06:59 runtime_log
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas    542720 Jun  4 06:59 result.tar.gz
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas       645 Jun  4 06:59 y0dMDmmmvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMmaKDmtrXIYn.diag
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 06:59 runtime_log.err
[2025-06-04 06:59:18] -rw-r--r--. 1 boincer umatlas     21427 Jun  4 06:59 stderr.txt
[2025-06-04 06:59:18] HITS file was successfully produced:
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas 178334536 Jun  4 06:58 shared/HITS.pool.root.1
[2025-06-04 06:59:18]  *** Contents of shared directory: ***
[2025-06-04 06:59:18] total 385940
[2025-06-04 06:59:18] -rw-r--r--. 2 boincer umatlas 215787374 Jun  4 06:21 ATLAS.root_0
[2025-06-04 06:59:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:21 start_atlas.sh
[2025-06-04 06:59:18] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 06:21 input.tar.gz
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas 178334536 Jun  4 06:58 HITS.pool.root.1
[2025-06-04 06:59:18] -rw-------. 1 boincer umatlas    542720 Jun  4 06:59 result.tar.gz
06:59:20 (3963500): run_atlas exited; CPU time 13478.105921
06:59:20 (3963500): called boinc_finish(0)

</stderr_txt>
]]>

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