Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:27:59 (1973891): wrapper (7.7.26015): starting
06:27:59 (1973891): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 06:27:59] Arguments: --nthreads 12
[2025-06-06 06:27:59] Threads: 12
[2025-06-06 06:27:59] Checking for CVMFS
[2025-06-06 06:27:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:27:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:27:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:28:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:28:27] 2.12.7.0 3695 1989 53100 146846 0 184 4055771 4096000 2736 130560 0 5451875 99.997 478569 128 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 0
[2025-06-06 06:28:27] CVMFS is ok
[2025-06-06 06:28:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:28:27] Checking for apptainer binary...
[2025-06-06 06:28:27] apptainer is not installed, using version from CVMFS
[2025-06-06 06:28:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:28:28] dualxeon2
[2025-06-06 06:28:28] apptainer works
[2025-06-06 06:28:28] Set ATHENA_PROC_NUMBER=12
[2025-06-06 06:28:28] Set ATHENA_CORE_NUMBER=12
[2025-06-06 06:28:28] Starting ATLAS job with PandaID=6678313950
[2025-06-06 06:28:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:07:53]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:07:53] 2025-06-06 08:06:48,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:06:51,275 | INFO     | monitor loop #433: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:06:51,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:06:53,779 | INFO     | monitor loop #434: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:06:53,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:06:56,282 | INFO     | monitor loop #435: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:06:56,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:06:58,785 | INFO     | monitor loop #436: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:06:58,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:00,160 | INFO     | PID=1977635 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 08:07:53] 2025-06-06 08:07:00,160 | INFO     | .. there are 4 such processes running
[2025-06-06 08:07:53] 2025-06-06 08:07:01,288 | INFO     | monitor loop #437: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:01,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:03,793 | INFO     | monitor loop #438: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:03,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:06,296 | INFO     | monitor loop #439: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:06,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:08,799 | INFO     | monitor loop #440: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:08,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:11,302 | INFO     | monitor loop #441: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:11,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:13,805 | INFO     | monitor loop #442: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:13,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:16,308 | INFO     | monitor loop #443: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:16,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:18,811 | INFO     | monitor loop #444: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:18,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:21,314 | INFO     | monitor loop #445: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:21,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:22,519 | INFO     | PID=1977635 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 08:07:53] 2025-06-06 08:07:22,519 | INFO     | .. there are 4 such processes running
[2025-06-06 08:07:53] 2025-06-06 08:07:23,817 | INFO     | monitor loop #446: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:23,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:26,324 | INFO     | monitor loop #447: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:26,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:28,827 | INFO     | monitor loop #448: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:28,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:31,332 | INFO     | monitor loop #449: job 0:6678313950 is in state 'finished'
[2025-06-06 08:07:53] 2025-06-06 08:07:31,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:07:53] 2025-06-06 08:07:32,761 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 08:07:53] 2025-06-06 08:07:32,765 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6678313950/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:07:53] 2025-06-06 08:07:32,766 | INFO     | extracted standard info from prmon json
[2025-06-06 08:07:53] 2025-06-06 08:07:32,766 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:07:53] 2025-06-06 08:07:32,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:07:53] 2025-06-06 08:07:32,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:07:53] 2025-06-06 08:07:32,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:07:53] 2025-06-06 08:07:32,769 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:07:53] 2025-06-06 08:07:32,770 | INFO     | sum of square deviations: 218571540.0
[2025-06-06 08:07:53] 2025-06-06 08:07:32,770 | INFO     | sum of deviations: -5450140891.999999
[2025-06-06 08:07:53] 2025-06-06 08:07:32,770 | INFO     | mean x: 1749194351.0
[2025-06-06 08:07:53] 2025-06-06 08:07:32,770 | INFO     | mean y: 2708952.775280899
[2025-06-06 08:07:53] 2025-06-06 08:07:32,770 | INFO     | -- intersect: 43619346601.21066
[2025-06-06 08:07:53] 2025-06-06 08:07:32,771 | INFO     | intersect: 43619346601.21066
[2025-06-06 08:07:53] 2025-06-06 08:07:32,771 | INFO     | chi2: 0.047689264713617216
[2025-06-06 08:07:53] 2025-06-06 08:07:32,771 | INFO     | -- intersect: 43619346601.21066
[2025-06-06 08:07:53] 2025-06-06 08:07:32,771 | INFO     | current memory leak: -24.94 B/s (using 89 data points, chi2=0.05)
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | ..............................
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | . Timing measurements:
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | . get job = 0 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | . initial setup = 3 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | . payload setup = 11 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | . stage-in = 0 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | . payload execution = 5842 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,772 | INFO     | . stage-out = 1 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,773 | INFO     | . log creation = 0 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,773 | INFO     | ..............................
[2025-06-06 08:07:53] 2025-06-06 08:07:32,925 | INFO     | 
[2025-06-06 08:07:53] 2025-06-06 08:07:32,925 | INFO     | job summary report
[2025-06-06 08:07:53] 2025-06-06 08:07:32,925 | INFO     | --------------------------------------------------
[2025-06-06 08:07:53] 2025-06-06 08:07:32,925 | INFO     | PanDA job id: 6678313950
[2025-06-06 08:07:53] 2025-06-06 08:07:32,925 | INFO     | task id: 45006595
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | errors: (none)
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | pilot state: finished 
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | transexitcode: 0
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | exeerrorcode: 0
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | exeerrordiag: 
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | exitcode: 0
[2025-06-06 08:07:53] 2025-06-06 08:07:32,926 | INFO     | exitmsg: OK
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | cpuconsumptiontime: 48415 s
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | nevents: 400
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | neventsw: 0
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | pid: 1984335
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | pgrp: 1984335
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | corecount: 12
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | event service: False
[2025-06-06 08:07:53] 2025-06-06 08:07:32,927 | INFO     | sizes: {0: 2397178, 1: 2397377, 8: 2397583, 12: 2397611, 5858: 2424194, 5860: 2433149, 5863: 2433333, 5910: 2433503}
[2025-06-06 08:07:53] 2025-06-06 08:07:32,928 | INFO     | --------------------------------------------------
[2025-06-06 08:07:53] 2025-06-06 08:07:32,928 | INFO     | 
[2025-06-06 08:07:53] 2025-06-06 08:07:32,928 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-06-06 08:07:53] 2025-06-06 08:07:32,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,957 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:07:53] 2025-06-06 08:07:32,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:07:53] 2025-06-06 08:07:32,958 | INFO     | job 6678313950 has completed (purged errors)
[2025-06-06 08:07:53] 2025-06-06 08:07:32,958 | INFO     | overall cleanup function is called
[2025-06-06 08:07:53] 2025-06-06 08:07:33,970 | INFO     | --- collectZombieJob: --- 10, [1984335]
[2025-06-06 08:07:53] 2025-06-06 08:07:33,970 | INFO     | zombie collector waiting for pid 1984335
[2025-06-06 08:07:53] 2025-06-06 08:07:33,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:07:53] 2025-06-06 08:07:33,970 | INFO     | collected zombie processes
[2025-06-06 08:07:53] 2025-06-06 08:07:33,970 | INFO     | will attempt to kill all subprocesses of pid=1984335
[2025-06-06 08:07:53] 2025-06-06 08:07:34,162 | INFO     | process IDs to be killed: [1984335] (in reverse order)
[2025-06-06 08:07:53] 2025-06-06 08:07:34,228 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:07:53] 2025-06-06 08:07:34,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:07:53] 2025-06-06 08:07:34,234 | INFO     | did not find any defunct processes belonging to 1984335
[2025-06-06 08:07:53] 2025-06-06 08:07:34,242 | INFO     | did not find any defunct processes belonging to 1984335
[2025-06-06 08:07:53] 2025-06-06 08:07:34,242 | INFO     | ready for new job
[2025-06-06 08:07:53] 2025-06-06 08:07:34,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:07:53] 2025-06-06 08:07:34,244 | INFO     | **************************************
[2025-06-06 08:07:53] 2025-06-06 08:07:34,244 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:07:53] 2025-06-06 08:07:34,244 | INFO     | **************************************
[2025-06-06 08:07:53] 2025-06-06 08:07:34,244 | INFO     | 
[2025-06-06 08:07:53] 2025-06-06 08:07:34,250 | INFO     | architecture information:
[2025-06-06 08:07:53] 2025-06-06 08:07:34,250 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:07:53] 2025-06-06 08:07:34,265 | INFO     | cat /etc/os-release:
[2025-06-06 08:07:53] NAME="CentOS Linux"
[2025-06-06 08:07:53] VERSION="7 (Core)"
[2025-06-06 08:07:53] ID="centos"
[2025-06-06 08:07:53] ID_LIKE="rhel fedora"
[2025-06-06 08:07:53] VERSION_ID="7"
[2025-06-06 08:07:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:07:53] ANSI_COLOR="0;31"
[2025-06-06 08:07:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:07:53] HOME_URL="https://www.centos.org/"
[2025-06-06 08:07:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:07:53] 
[2025-06-06 08:07:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:07:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:07:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:07:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:07:53] 
[2025-06-06 08:07:53] 2025-06-06 08:07:34,265 | INFO     | **************************************
[2025-06-06 08:07:53] 2025-06-06 08:07:34,768 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-06-06 08:07:53] 2025-06-06 08:07:34,785 | INFO     | sufficient remaining disk space (94618255360 B)
[2025-06-06 08:07:53] 2025-06-06 08:07:34,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:07:53] 2025-06-06 08:07:34,785 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:07:53] 2025-06-06 08:07:34,785 | INFO     | update_server=False
[2025-06-06 08:07:53] 2025-06-06 08:07:34,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:07:53] 2025-06-06 08:07:34,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:07:53] 2025-06-06 08:07:34,786 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 08:07:53] 2025-06-06 08:07:34,786 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:07:53] 2025-06-06 08:07:34,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:07:53] 2025-06-06 08:07:34,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:07:53] 2025-06-06 08:07:34,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:07:53] 2025-06-06 08:07:34,840 | INFO     | aborting loop
[2025-06-06 08:07:53] 2025-06-06 08:07:35,236 | INFO     | all job control threads have been joined
[2025-06-06 08:07:53] 2025-06-06 08:07:35,633 | INFO     | all data control threads have been joined
[2025-06-06 08:07:53] 2025-06-06 08:07:35,791 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:35,791 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:35,845 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:35,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:07:53] 2025-06-06 08:07:35,978 | INFO     | all payload control threads have been joined
[2025-06-06 08:07:53] 2025-06-06 08:07:36,241 | INFO     | [job] control thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:36,274 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:36,351 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:36,527 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:36,638 | INFO     | [data] control thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:36,750 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:36,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:07:53] 2025-06-06 08:07:36,983 | INFO     | [payload] control thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:37,166 | INFO     | [job] validate thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:37,232 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:37,250 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:37,873 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:40,814 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:45,290 | INFO     | job.realtimelogging is not enabled
[2025-06-06 08:07:53] 2025-06-06 08:07:46,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:07:53] 2025-06-06 08:07:47,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127444109281088)>', '<ExcThread(monitor, started 127443331434240)>']
[2025-06-06 08:07:53] 2025-06-06 08:07:47,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:07:53] 2025-06-06 08:07:47,852 | INFO     | [monitor] control thread has ended
[2025-06-06 08:07:53] 2025-06-06 08:07:52,722 | INFO     | all workflow threads have been joined
[2025-06-06 08:07:53] 2025-06-06 08:07:52,722 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:07:53] 2025-06-06 08:07:52,722 | INFO     | traces error code: 0
[2025-06-06 08:07:53] 2025-06-06 08:07:52,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:07:53] 2025-06-06 08:07:52,843 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:07:53] 2025-06-06 08:07:52,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:07:53] 2025-06-06 08:07:52,848 [wrapper] pilotpid: 1977635
[2025-06-06 08:07:53] 2025-06-06 08:07:52,853 [wrapper] Pilot exit status: 0
[2025-06-06 08:07:53] 2025-06-06 08:07:52,874 [wrapper] pandaids: 6678313950
[2025-06-06 08:07:53] 2025-06-06 08:07:52,931 [wrapper] cleanup supervisor_pilot 2073007 1977636
[2025-06-06 08:07:53] 2025-06-06 08:07:52,936 [wrapper] Test setup, not cleaning
[2025-06-06 08:07:53] 2025-06-06 08:07:52,939 [wrapper] apfmon messages muted
[2025-06-06 08:07:53] 2025-06-06 08:07:52,946 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:07:53] 2025-06-06 08:07:52,952 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:07:53]  *** Error codes and diagnostics ***
[2025-06-06 08:07:53]     "exeErrorCode": 0,
[2025-06-06 08:07:53]     "exeErrorDiag": "",
[2025-06-06 08:07:53]     "pilotErrorCode": 0,
[2025-06-06 08:07:53]     "pilotErrorDiag": "",
[2025-06-06 08:07:53]  *** Listing of results directory ***
[2025-06-06 08:07:53] total 392372
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 08:07:53] -rwx------ 1 boinc boinc     37140 Jun  4 05:01 runpilot2-wrapper.sh
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:01 queuedata.json
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc       100 Jun  6 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:07:53] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 06:27 run_atlas
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc       105 Jun  6 06:27 job.xml
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc      6557 Jun  6 06:27 init_data.xml
[2025-06-06 08:07:53] -rw-r--r-- 2 boinc boinc 215731164 Jun  6 06:27 EVNT.45006593._002116.pool.root.1
[2025-06-06 08:07:53] drwxrwx--x 2 boinc boinc      4096 Jun  6 06:27 shared
[2025-06-06 08:07:53] -rw-r--r-- 2 boinc boinc    508883 Jun  6 06:27 input.tar.gz
[2025-06-06 08:07:53] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:27 start_atlas.sh
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc         0 Jun  6 06:27 boinc_lockfile
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc      2525 Jun  6 06:28 pandaJob.out
[2025-06-06 08:07:53] -rw------- 1 boinc boinc    988117 Jun  6 06:28 agis_schedconf.cvmfs.json
[2025-06-06 08:07:53] -rw------- 1 boinc boinc   1598969 Jun  6 06:28 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:07:53] drwx------ 4 boinc boinc      4096 Jun  6 06:28 pilot3
[2025-06-06 08:07:53] -rw------- 1 boinc boinc 180339185 Jun  6 08:06 HITS.45006595._052835.pool.root.1
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc       530 Jun  6 08:06 boinc_task_state.xml
[2025-06-06 08:07:53] -rw------- 1 boinc boinc      1021 Jun  6 08:06 memory_monitor_summary.json
[2025-06-06 08:07:53] -rw------- 1 boinc boinc    368470 Jun  6 08:06 log.45006595._052835.job.log.tgz.1
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc      8192 Jun  6 08:07 boinc_mmap_file
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc        27 Jun  6 08:07 wrapper_checkpoint.txt
[2025-06-06 08:07:53] -rw------- 1 boinc boinc        95 Jun  6 08:07 pilot_heartbeat.json
[2025-06-06 08:07:53] -rw------- 1 boinc boinc      7672 Jun  6 08:07 heartbeat.json
[2025-06-06 08:07:53] -rw------- 1 boinc boinc      4555 Jun  6 08:07 pilotlog.txt
[2025-06-06 08:07:53] -rw------- 1 boinc boinc    572931 Jun  6 08:07 log.45006595._052835.job.log.1
[2025-06-06 08:07:53] -rw------- 1 boinc boinc       357 Jun  6 08:07 output.list
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc       620 Jun  6 08:07 runtime_log
[2025-06-06 08:07:53] -rw------- 1 boinc boinc    962560 Jun  6 08:07 result.tar.gz
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc      8726 Jun  6 08:07 runtime_log.err
[2025-06-06 08:07:53] -rw------- 1 boinc boinc       646 Jun  6 08:07 PdoNDmcQvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7iaKDmMFWIKn.diag
[2025-06-06 08:07:53] -rw-r--r-- 1 boinc boinc     22162 Jun  6 08:07 stderr.txt
[2025-06-06 08:07:53] HITS file was successfully produced:
[2025-06-06 08:07:53] -rw------- 1 boinc boinc 180339185 Jun  6 08:06 shared/HITS.pool.root.1
[2025-06-06 08:07:53]  *** Contents of shared directory: ***
[2025-06-06 08:07:53] total 388256
[2025-06-06 08:07:53] -rw-r--r-- 2 boinc boinc 215731164 Jun  6 06:27 ATLAS.root_0
[2025-06-06 08:07:53] -rw-r--r-- 2 boinc boinc    508883 Jun  6 06:27 input.tar.gz
[2025-06-06 08:07:53] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:27 start_atlas.sh
[2025-06-06 08:07:53] -rw------- 1 boinc boinc 180339185 Jun  6 08:06 HITS.pool.root.1
[2025-06-06 08:07:53] -rw------- 1 boinc boinc    962560 Jun  6 08:07 result.tar.gz
08:07:54 (1973891): run_atlas exited; CPU time 48492.030489
08:07:54 (1973891): called boinc_finish(0)

</stderr_txt>
]]>

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