Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 17:10:01 (25652): Detected: vboxwrapper 26206
2025-06-04 17:10:01 (25652): Detected: BOINC client v8.0.2
2025-06-04 17:10:02 (25652): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-04 17:10:02 (25652): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 17:10:03 (25652): Create VM. (boinc_3e37f95a8ec99e0d, slot#2)
2025-06-04 17:10:03 (25652): Setting Memory Size for VM. (4800MB)
2025-06-04 17:10:04 (25652): Setting CPU Count for VM. (8)
2025-06-04 17:10:04 (25652): Setting Chipset Options for VM.
2025-06-04 17:10:04 (25652): Setting Graphics Controller Options for VM.
2025-06-04 17:10:05 (25652): Setting Boot Options for VM.
2025-06-04 17:10:05 (25652): Setting Network Configuration for NAT.
2025-06-04 17:10:05 (25652): Enabling VM Network Access.
2025-06-04 17:10:05 (25652): Disabling USB Support for VM.
2025-06-04 17:10:06 (25652): Disabling COM Port Support for VM.
2025-06-04 17:10:06 (25652): Disabling LPT Port Support for VM.
2025-06-04 17:10:06 (25652): Disabling Audio Support for VM.
2025-06-04 17:10:06 (25652): Disabling Clipboard Support for VM.
2025-06-04 17:10:07 (25652): Disabling Drag and Drop Support for VM.
2025-06-04 17:10:07 (25652): Adding storage controller(s) to VM.
2025-06-04 17:10:07 (25652): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 17:10:08 (25652): Adding VirtualBox Guest Additions to VM.
2025-06-04 17:10:08 (25652): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 17:10:08 (25652): forwarding host port 14359 to guest port 80
2025-06-04 17:10:08 (25652): Enabling remote desktop for VM.
2025-06-04 17:10:09 (25652): Required extension pack not installed, remote desktop not enabled.
2025-06-04 17:10:09 (25652): Enabling shared directory for VM.
2025-06-04 17:10:09 (25652): Starting VM using VBoxManage interface. (boinc_3e37f95a8ec99e0d, slot#2)
2025-06-04 17:10:19 (25652): Successfully started VM. (PID = '16212')
2025-06-04 17:10:19 (25652): Reporting VM Process ID to BOINC.
2025-06-04 17:10:19 (25652): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-04 17:10:19 (25652): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 17:10:19 (25652): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 17:10:19 (25652): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 17:10:19 (25652): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 17:10:19 (25652): Detected: Web Application Enabled (http://localhost:14359)
2025-06-04 17:10:20 (25652): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 17:10:29 (25652): Preference change detected
2025-06-04 17:10:29 (25652): Setting CPU throttle for VM. (25%)
2025-06-04 17:10:30 (25652): Setting checkpoint interval to 10000 seconds. (Higher value of (Preference: 10000 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 17:10:30 (25652): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 17:10:31 (25652): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 17:10:31 (25652): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 17:10:39 (25652): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 17:10:39 (25652): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 17:10:39 (25652): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 17:10:54 (25652): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 17:10:54 (25652): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 17:11:19 (25652): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.000253 main     Log opened 2025-06-04T17:11:06.969709000Z
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.000492 main     OS Product: Linux
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.000586 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.000686 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.000828 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.000831 main     Process ID: 1388
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.000833 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 17:11:19 (25652): Guest Log: 00:00:00.002641 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 17:11:19 (25652): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 17:11:19 (25652): Guest Log: [INFO] Mounting shared directory
2025-06-04 17:11:19 (25652): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 17:11:28 (25652): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 17:11:28 (25652): Guest Log: [INFO] Detected branch: prod
2025-06-04 17:11:29 (25652): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 17:11:29 (25652): Guest Log: Copying input files
2025-06-04 17:11:29 (25652): Guest Log: 00:00:10.005938 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 621 842 055 000ns (GuestNow=1 749 078 688 816 698 000 ns GuestLast=1 749 057 066 974 643 000 ns fSetTimeLastLoop=true )
2025-06-04 17:11:33 (25652): Guest Log: Copied input files into RunAtlas.
2025-06-04 17:11:33 (25652): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 17:11:33 (25652): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 17:11:33 (25652): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 17:11:33 (25652): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 17:11:45 (25652): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 17:11:45 (25652): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 17:11:45 (25652): Guest Log: 2.6.3.0 1674 0 30192 146797 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 17:11:47 (25652): Guest Log: copied the webapp to /var/www
2025-06-04 17:11:47 (25652): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 17:11:47 (25652): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 17:11:47 (25652): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 17:11:47 (25652): Guest Log:  *** Starting ATLAS job. (PandaID=6678314019 taskID=45006595) ***
2025-06-04 18:50:34 (25652): Status Report: Elapsed Time: '6000.000000'
2025-06-04 18:50:34 (25652): Status Report: CPU Time: '7305.171875'
2025-06-04 19:56:26 (25652): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 19:56:47 (25652): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 20:31:01 (25652): Status Report: Elapsed Time: '12000.000000'
2025-06-04 20:31:01 (25652): Status Report: CPU Time: '21403.109375'
2025-06-04 20:41:03 (25652): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 20:41:24 (25652): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 21:38:53 (25652): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 21:39:13 (25652): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 22:11:49 (25652): Status Report: Elapsed Time: '18000.000000'
2025-06-04 22:11:49 (25652): Status Report: CPU Time: '35549.437500'
2025-06-04 22:18:53 (25652): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 22:19:14 (25652): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 23:52:36 (25652): Status Report: Elapsed Time: '24000.000000'
2025-06-04 23:52:36 (25652): Status Report: CPU Time: '49825.031250'
2025-06-05 01:33:05 (25652): Status Report: Elapsed Time: '30000.000000'
2025-06-05 01:33:05 (25652): Status Report: CPU Time: '64175.015625'
2025-06-05 03:13:33 (25652): Status Report: Elapsed Time: '36000.000000'
2025-06-05 03:13:33 (25652): Status Report: CPU Time: '78508.781250'
2025-06-05 04:01:37 (25652): Guest Log:  *** Job finished ***
2025-06-05 04:01:37 (25652): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:15,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:16,361 | INFO     | [job] queue monitor thread has finished
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:19,701 | INFO     | [data] queue_monitor thread has finished
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:21,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104764892992)>', '<ExcThread(monitor, started 140104098109184)>']
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:21,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:21,920 | INFO     | [monitor] control thread has ended
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:26,540 | INFO     | all workflow threads have been joined
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:26,541 | INFO     | end of generic workflow (traces error code: 0)
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:26,541 | INFO     | traces error code: 0
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:26,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:26,989 [wrapper] ==== pilot stdout END ====
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:26,998 [wrapper] ==== wrapper stdout RESUME ====
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,007 [wrapper] pilotpid: 6025
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,016 [wrapper] Pilot exit status: 0
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,305 [wrapper] pandaids: 6678314019
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,396 [wrapper] cleanup supervisor_pilot  4054 6026
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,405 [wrapper] Test setup, not cleaning
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,415 [wrapper] apfmon messages muted
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,423 [wrapper] ==== wrapper stdout END ====
2025-06-05 04:01:37 (25652): Guest Log: 2025-06-05 10:00:27,432 [wrapper] ==== wrapper stderr END ====
2025-06-05 04:01:37 (25652): Guest Log:  *** Error codes and diagnostics ***
2025-06-05 04:01:37 (25652): Guest Log:     "exeErrorCode": 0,
2025-06-05 04:01:37 (25652): Guest Log:     "exeErrorDiag": "",
2025-06-05 04:01:37 (25652): Guest Log:     "pilotErrorCode": 0,
2025-06-05 04:01:37 (25652): Guest Log:     "pilotErrorDiag": "",
2025-06-05 04:01:37 (25652): Guest Log:  *** Listing of results directory ***
2025-06-05 04:01:37 (25652): Guest Log: total 187796
2025-06-05 04:01:37 (25652): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:58 pilot3.tar.gz
2025-06-05 04:01:37 (25652): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 05:09 queuedata.json
2025-06-05 04:01:37 (25652): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 05:09 runpilot2-wrapper.sh
2025-06-05 04:01:37 (25652): Guest Log: -rwxr-xr-x. 1 atlas atlas      9041 Jun  4 23:11 init_data.xml
2025-06-05 04:01:37 (25652): Guest Log: -rwxr-xr-x. 1 atlas atlas    508882 Jun  4 23:11 input.tar.gz
2025-06-05 04:01:37 (25652): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 23:11 start_atlas.sh
2025-06-05 04:01:37 (25652): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 23:11 EVNT.45006593._002119.pool.root.1 -> /data/./ATLAS.root_0
2025-06-05 04:01:37 (25652): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Jun  4 23:11 pandaJob.out
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas    987032 Jun  4 23:13 agis_schedconf.cvmfs.json
2025-06-05 04:01:37 (25652): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 23:13 pilot3
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas 183623507 Jun  5 09:56 HITS.45006595._052904.pool.root.1
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas        95 Jun  5 09:59 pilot_heartbeat.json
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas      1032 Jun  5 09:59 memory_monitor_summary.json
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 09:59 agis_ddmendpoints.agis.ALL.json
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas    490458 Jun  5 09:59 log.45006595._052904.job.log.tgz.1
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas      7735 Jun  5 10:00 heartbeat.json
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  5 10:00 pilotlog.txt
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas   1968816 Jun  5 10:00 log.45006595._052904.job.log.1
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 10:00 output.list
2025-06-05 04:01:37 (25652): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 10:00 runtime_log
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas   2478080 Jun  5 10:00 result.tar.gz
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas       670 Jun  5 10:00 XonMDmwYvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0JnKDm1ymhLm.diag
2025-06-05 04:01:37 (25652): Guest Log: -rw-r--r--. 1 atlas atlas      8623 Jun  5 10:00 runtime_log.err
2025-06-05 04:01:37 (25652): Guest Log: Looking for outputfile HITS.45006595._052904.pool.root.1
2025-06-05 04:01:37 (25652): Guest Log: HITS file was successfully produced
2025-06-05 04:01:37 (25652): Guest Log: -rw-------. 1 atlas atlas 183623507 Jun  5 09:56 /home/atlas/RunAtlas/HITS.45006595._052904.pool.root.1
2025-06-05 04:01:41 (25652): Guest Log: Successfully finished the ATLAS job!
2025-06-05 04:01:41 (25652): Guest Log: Copying the results back to the shared directory!
2025-06-05 04:01:41 (25652): Guest Log:  *** Contents of shared directory: ***
2025-06-05 04:01:41 (25652): Guest Log: total 391736
2025-06-05 04:01:41 (25652): Guest Log: -rwxrwxrwx. 1 root root 214492542 Jun  4 23:10 ATLAS.root_0
2025-06-05 04:01:41 (25652): Guest Log: -rwxrwxrwx. 1 root root 183623507 Jun  5  2025 HITS.pool.root.1
2025-06-05 04:01:41 (25652): Guest Log: -rwxrwxrwx. 1 root root      9041 Jun  4 23:10 init_data.xml
2025-06-05 04:01:41 (25652): Guest Log: -rwxrwxrwx. 1 root root    508882 Jun  4 10:30 input.tar.gz
2025-06-05 04:01:41 (25652): Guest Log: -rwxrwxrwx. 1 root root   2478080 Jun  5  2025 result.tar.gz
2025-06-05 04:01:41 (25652): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 10:30 start_atlas.sh
2025-06-05 04:01:41 (25652): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-05 04:01:41 (25652): VM Completion File Detected.
2025-06-05 04:01:41 (25652): Powering off VM.
2025-06-05 04:01:42 (25652): Successfully stopped VM.
2025-06-05 04:01:42 (25652): Deregistering VM. (boinc_3e37f95a8ec99e0d, slot#2)
2025-06-05 04:01:42 (25652): Removing network bandwidth throttle group from VM.
2025-06-05 04:01:42 (25652): Removing VM from VirtualBox.
04:01:47 (25652): called boinc_finish(0)

</stderr_txt>
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