Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:28:28 (119108): wrapper (7.7.26015): starting
06:28:28 (119108): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:28:28] Arguments: --nthreads 8
[2025-06-04 06:28:28] Threads: 8
[2025-06-04 06:28:28] Checking for CVMFS
[2025-06-04 06:28:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:28:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:28:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:28:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:28:29] 2.12.6.0 1132244 23178 138744 146777 3 198 24595509 40960000 24659 16776704 0 277586010 99.774 164146586 36659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:28:29] CVMFS is ok
[2025-06-04 06:28:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:28:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:28:29] Further information can be found at the LHC@home message board.
[2025-06-04 06:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:28:29] Checking for apptainer binary...
[2025-06-04 06:28:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:28:29] Running /usr/bin/apptainer --version
[2025-06-04 06:28:29] apptainer version 1.4.1-1.el9
[2025-06-04 06:28:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:28:29] c8-7-3.aglt2.org
[2025-06-04 06:28:29] apptainer works
[2025-06-04 06:28:29] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:28:29] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:28:29] Starting ATLAS job with PandaID=6678363428
[2025-06-04 06:28:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:16:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:16:14]  protocol_id=None
[2025-06-04 07:16:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:16:14]  replicas=None
[2025-06-04 07:16:14]  scope=mc23_13p6TeV
[2025-06-04 07:16:14]  status=None
[2025-06-04 07:16:14]  status_code=0
[2025-06-04 07:16:14]  storage_token=
[2025-06-04 07:16:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678363428/log.45006595._053468.job.log.tgz.1
[2025-06-04 07:16:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/18/log.45006595._053468.job.log.tgz.1
[2025-06-04 07:16:14]  workdir=None
[2025-06-04 07:16:14] ]
[2025-06-04 07:16:14] 2025-06-04 11:15:49,276 | INFO     | transferring file log.45006595._053468.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678363428/log.45006595._053468.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:16:14] 2025-06-04 11:15:49,276 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678363428/log.45006595._053468.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053468.job
[2025-06-04 07:16:14] 2025-06-04 11:15:49,287 | INFO     | adding to output.list: log.45006595._053468.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/18/log.45006595._053468.job.log.tg
[2025-06-04 07:16:14] 2025-06-04 11:15:49,287 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:16:14] 2025-06-04 11:15:49,288 | INFO     | summary of transferred files:
[2025-06-04 07:16:14] 2025-06-04 11:15:49,288 | INFO     |  -- lfn=log.45006595._053468.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:16:14] 2025-06-04 11:15:49,288 | INFO     | stage-out finished correctly
[2025-06-04 07:16:14] 2025-06-04 11:15:50,226 | INFO     | monitor loop #211: job 0:6678363428 is in state 'finished'
[2025-06-04 07:16:14] 2025-06-04 11:15:50,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:16:14] 2025-06-04 11:15:51,476 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:16:14] 2025-06-04 11:15:51,569 | INFO     | 2835s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 07:16:14] 2025-06-04 11:15:52,729 | INFO     | monitor loop #212: job 0:6678363428 is in state 'finished'
[2025-06-04 07:16:14] 2025-06-04 11:15:52,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:16:14] 2025-06-04 11:15:54,494 | INFO     | job 6678363428 has state=finished
[2025-06-04 07:16:14] 2025-06-04 11:15:54,494 | INFO     | preparing for final server update for job 6678363428 in state='finished'
[2025-06-04 07:16:14] 2025-06-04 11:15:54,495 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:16:14] 2025-06-04 11:15:54,495 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:16:14] 2025-06-04 11:15:54,495 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:16:14] 2025-06-04 11:15:54,495 | INFO     | job 6678363428 has finished - writing final server update
[2025-06-04 07:16:14] 2025-06-04 11:15:54,495 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:16:14] 2025-06-04 11:15:54,512 | INFO     | executing command: lscpu
[2025-06-04 07:16:14] 2025-06-04 11:15:54,671 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:16:14] 2025-06-04 11:15:55,231 | INFO     | monitor loop #213: job 0:6678363428 is in state 'finished'
[2025-06-04 07:16:14] 2025-06-04 11:15:55,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:16:14] 2025-06-04 11:15:57,734 | INFO     | monitor loop #214: job 0:6678363428 is in state 'finished'
[2025-06-04 07:16:14] 2025-06-04 11:15:57,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:16:14] 2025-06-04 11:15:59,032 | INFO     | PID=123146 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 07:16:14] 2025-06-04 11:15:59,032 | INFO     | .. there are 25 such processes running
[2025-06-04 07:16:14] 2025-06-04 11:16:00,233 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:16:14] 2025-06-04 11:16:00,233 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678363428/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:16:14] 2025-06-04 11:16:00,234 | INFO     | extracted standard info from prmon json
[2025-06-04 07:16:14] 2025-06-04 11:16:00,234 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:16:14] 2025-06-04 11:16:00,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:16:14] 2025-06-04 11:16:00,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:16:14] 2025-06-04 11:16:00,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | sum of square deviations: 18381740.0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | sum of deviations: 3151093348.0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | mean x: 1749034407.0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | mean y: 2525782.769230769
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | -- intersect: -299826036982.28046
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | intersect: -299826036982.28046
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | chi2: 0.7117256764632628
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | -- intersect: -299826036982.28046
[2025-06-04 07:16:14] 2025-06-04 11:16:00,235 | INFO     | current memory leak: 171.43 B/s (using 39 data points, chi2=0.71)
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | ..............................
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . Timing measurements:
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . get job = 0 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . initial setup = 2 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . payload setup = 5 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . stage-in = 0 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . payload execution = 2802 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . stage-out = 3 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | . log creation = 1 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,236 | INFO     | ..............................
[2025-06-04 07:16:14] 2025-06-04 11:16:00,285 | INFO     | 
[2025-06-04 07:16:14] 2025-06-04 11:16:00,285 | INFO     | job summary report
[2025-06-04 07:16:14] 2025-06-04 11:16:00,285 | INFO     | --------------------------------------------------
[2025-06-04 07:16:14] 2025-06-04 11:16:00,285 | INFO     | PanDA job id: 6678363428
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | task id: 45006595
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | errors: (none)
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | pilot state: finished 
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | transexitcode: 0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | exeerrorcode: 0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | exeerrordiag: 
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | exitcode: 0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | exitmsg: OK
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | cpuconsumptiontime: 17606 s
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | nevents: 400
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | neventsw: 0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | pid: 132622
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | pgrp: 132622
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | corecount: 8
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | event service: False
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | sizes: {0: 2405185, 4: 2405391, 10: 2405419, 2812: 2430750, 2816: 2439691, 2819: 2439747, 2827: 2440045}
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | --------------------------------------------------
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | 
[2025-06-04 07:16:14] 2025-06-04 11:16:00,286 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:16:14] 2025-06-04 11:16:00,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:16:14] 2025-06-04 11:16:00,306 | INFO     | job 6678363428 has completed (purged errors)
[2025-06-04 07:16:14] 2025-06-04 11:16:00,306 | INFO     | overall cleanup function is called
[2025-06-04 07:16:14] 2025-06-04 11:16:01,312 | INFO     | --- collectZombieJob: --- 10, [132622]
[2025-06-04 07:16:14] 2025-06-04 11:16:01,312 | INFO     | zombie collector waiting for pid 132622
[2025-06-04 07:16:14] 2025-06-04 11:16:01,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:16:14] 2025-06-04 11:16:01,313 | INFO     | collected zombie processes
[2025-06-04 07:16:14] 2025-06-04 11:16:01,313 | INFO     | will attempt to kill all subprocesses of pid=132622
[2025-06-04 07:16:14] 2025-06-04 11:16:01,655 | INFO     | process IDs to be killed: [132622] (in reverse order)
[2025-06-04 07:16:14] 2025-06-04 11:16:01,785 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:16:14] 2025-06-04 11:16:01,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:16:14] 2025-06-04 11:16:01,804 | INFO     | did not find any defunct processes belonging to 132622
[2025-06-04 07:16:14] 2025-06-04 11:16:01,821 | INFO     | did not find any defunct processes belonging to 132622
[2025-06-04 07:16:14] 2025-06-04 11:16:01,821 | INFO     | ready for new job
[2025-06-04 07:16:14] 2025-06-04 11:16:01,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:16:14] 2025-06-04 11:16:01,823 | INFO     | **************************************
[2025-06-04 07:16:14] 2025-06-04 11:16:01,823 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:16:14] 2025-06-04 11:16:01,823 | INFO     | **************************************
[2025-06-04 07:16:14] 2025-06-04 11:16:01,823 | INFO     | 
[2025-06-04 07:16:14] 2025-06-04 11:16:01,840 | INFO     | architecture information:
[2025-06-04 07:16:14] 2025-06-04 11:16:01,841 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:16:14] 2025-06-04 11:16:01,855 | INFO     | cat /etc/os-release:
[2025-06-04 07:16:14] NAME="CentOS Linux"
[2025-06-04 07:16:14] VERSION="7 (Core)"
[2025-06-04 07:16:14] ID="centos"
[2025-06-04 07:16:14] ID_LIKE="rhel fedora"
[2025-06-04 07:16:14] VERSION_ID="7"
[2025-06-04 07:16:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:16:14] ANSI_COLOR="0;31"
[2025-06-04 07:16:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:16:14] HOME_URL="https://www.centos.org/"
[2025-06-04 07:16:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:16:14] 
[2025-06-04 07:16:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:16:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:16:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:16:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:16:14] 
[2025-06-04 07:16:14] 2025-06-04 11:16:01,856 | INFO     | **************************************
[2025-06-04 07:16:14] 2025-06-04 11:16:02,356 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:16:14] 2025-06-04 11:16:02,380 | INFO     | sufficient remaining disk space (171986386944 B)
[2025-06-04 07:16:14] 2025-06-04 11:16:02,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:16:14] 2025-06-04 11:16:02,380 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:16:14] 2025-06-04 11:16:02,380 | INFO     | update_server=False
[2025-06-04 07:16:14] 2025-06-04 11:16:02,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:16:14] 2025-06-04 11:16:02,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:16:14] 2025-06-04 11:16:02,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:16:14] 2025-06-04 11:16:02,654 | INFO     | all data control threads have been joined
[2025-06-04 07:16:14] 2025-06-04 11:16:02,745 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:16:14] 2025-06-04 11:16:02,746 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:16:14] 2025-06-04 11:16:02,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:16:14] 2025-06-04 11:16:02,746 | INFO     | will abort loop
[2025-06-04 07:16:14] 2025-06-04 11:16:02,782 | INFO     | all payload control threads have been joined
[2025-06-04 07:16:14] 2025-06-04 11:16:03,043 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:16:14] 2025-06-04 11:16:03,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:16:14] 2025-06-04 11:16:03,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:16:14] 2025-06-04 11:16:03,386 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:03,504 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:03,508 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:03,591 | INFO     | all job control threads have been joined
[2025-06-04 07:16:14] 2025-06-04 11:16:03,655 | INFO     | [data] control thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:03,749 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:03,757 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:03,788 | INFO     | [payload] control thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:04,364 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:04,385 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:04,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:04,523 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:04,597 | INFO     | [job] control thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:04,854 | INFO     | [job] validate thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:04,953 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:05,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:16:14] 2025-06-04 11:16:06,299 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:06,386 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:16:14] 2025-06-04 11:16:08,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946805233472)>', '<ExcThread(monitor, started 139946308384512)>']
[2025-06-04 07:16:14] 2025-06-04 11:16:09,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:16:14] 2025-06-04 11:16:09,064 | INFO     | [monitor] control thread has ended
[2025-06-04 07:16:14] 2025-06-04 11:16:13,517 | INFO     | all workflow threads have been joined
[2025-06-04 07:16:14] 2025-06-04 11:16:13,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:16:14] 2025-06-04 11:16:13,518 | INFO     | traces error code: 0
[2025-06-04 07:16:14] 2025-06-04 11:16:13,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:16:14] 2025-06-04 11:16:13,768 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:16:14] 2025-06-04 11:16:13,771 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:16:14] 2025-06-04 11:16:13,773 [wrapper] pilotpid: 123146
[2025-06-04 07:16:14] 2025-06-04 11:16:13,775 [wrapper] Pilot exit status: 0
[2025-06-04 07:16:14] 2025-06-04 11:16:13,823 [wrapper] pandaids: 6678363428
[2025-06-04 07:16:14] 2025-06-04 11:16:13,915 [wrapper] cleanup supervisor_pilot  589762 123147
[2025-06-04 07:16:14] 2025-06-04 11:16:13,918 [wrapper] Test setup, not cleaning
[2025-06-04 07:16:14] 2025-06-04 11:16:13,921 [wrapper] apfmon messages muted
[2025-06-04 07:16:14] 2025-06-04 11:16:13,923 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:16:14] 2025-06-04 11:16:13,925 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:16:14]  *** Error codes and diagnostics ***
[2025-06-04 07:16:14]     "exeErrorCode": 0,
[2025-06-04 07:16:14]     "exeErrorDiag": "",
[2025-06-04 07:16:14]     "pilotErrorCode": 0,
[2025-06-04 07:16:14]     "pilotErrorDiag": "",
[2025-06-04 07:16:14]  *** Listing of results directory ***
[2025-06-04 07:16:14] total 388996
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:22 queuedata.json
[2025-06-04 07:16:14] -rwx------. 1 boincer umatlas     37140 Jun  4 01:24 runpilot2-wrapper.sh
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:16:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:28 run_atlas
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:28 job.xml
[2025-06-04 07:16:14] -rw-r--r--. 2 boincer umatlas 217880206 Jun  4 06:28 EVNT.45006593._002140.pool.root.1
[2025-06-04 07:16:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:28 start_atlas.sh
[2025-06-04 07:16:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:28 shared
[2025-06-04 07:16:14] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 06:28 input.tar.gz
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:28 boinc_lockfile
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas      2526 Jun  4 06:28 pandaJob.out
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas    986812 Jun  4 06:28 agis_schedconf.cvmfs.json
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:16:14] drwx------. 4 boincer umatlas      4096 Jun  4 06:28 pilot3
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 07:10 init_data.xml
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas 175449270 Jun  4 07:15 HITS.45006595._053468.pool.root.1
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:15 boinc_task_state.xml
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas      1045 Jun  4 07:15 memory_monitor_summary.json
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas        95 Jun  4 07:15 pilot_heartbeat.json
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas    282546 Jun  4 07:15 log.45006595._053468.job.log.tgz.1
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas      7707 Jun  4 07:16 heartbeat.json
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:16 wrapper_checkpoint.txt
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas      4540 Jun  4 07:16 pilotlog.txt
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:16 boinc_mmap_file
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas    299477 Jun  4 07:16 log.45006595._053468.job.log.1
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas       357 Jun  4 07:16 output.list
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:16 runtime_log
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas    604160 Jun  4 07:16 result.tar.gz
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 07:16 runtime_log.err
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas       653 Jun  4 07:16 icANDmmmvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkmaKDmR8vQJm.diag
[2025-06-04 07:16:14] -rw-r--r--. 1 boincer umatlas     21805 Jun  4 07:16 stderr.txt
[2025-06-04 07:16:14] HITS file was successfully produced:
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas 175449270 Jun  4 07:15 shared/HITS.pool.root.1
[2025-06-04 07:16:14]  *** Contents of shared directory: ***
[2025-06-04 07:16:14] total 385228
[2025-06-04 07:16:14] -rw-r--r--. 2 boincer umatlas 217880206 Jun  4 06:28 ATLAS.root_0
[2025-06-04 07:16:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:28 start_atlas.sh
[2025-06-04 07:16:14] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 06:28 input.tar.gz
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas 175449270 Jun  4 07:15 HITS.pool.root.1
[2025-06-04 07:16:14] -rw-------. 1 boincer umatlas    604160 Jun  4 07:16 result.tar.gz
07:16:15 (119108): run_atlas exited; CPU time 17628.060826
07:16:15 (119108): called boinc_finish(0)

</stderr_txt>
]]>

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