Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:20:39 (1333946): wrapper (7.7.26015): starting
19:20:39 (1333946): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 19:20:39] Arguments: --nthreads 12
[2025-06-06 19:20:39] Threads: 12
[2025-06-06 19:20:39] Checking for CVMFS
[2025-06-06 19:20:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 19:20:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 19:20:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 19:20:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 19:20:43] 2.12.7.0 19605 4963 56064 146873 2 15 2128164 4096001 912 130560 0 3409776 99.989 1187888 166 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 19:20:43] CVMFS is ok
[2025-06-06 19:20:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 19:20:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 19:20:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 19:20:43] Further information can be found at the LHC@home message board.
[2025-06-06 19:20:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 19:20:43] Checking for apptainer binary...
[2025-06-06 19:20:43] apptainer is not installed, using version from CVMFS
[2025-06-06 19:20:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 19:20:45] g630
[2025-06-06 19:20:45] apptainer works
[2025-06-06 19:20:45] Set ATHENA_PROC_NUMBER=12
[2025-06-06 19:20:45] Set ATHENA_CORE_NUMBER=12
[2025-06-06 19:20:45] Starting ATLAS job with PandaID=6678363372
[2025-06-06 19:20:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 01:22:37]  *** The last 200 lines of the pilot log: ***
[2025-06-07 01:22:37] 2025-06-07 01:22:14,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 01:22:37] 2025-06-07 01:22:14,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 01:22:37] 2025-06-07 01:22:14,863 | INFO     | fitting pss+swap vs Time
[2025-06-07 01:22:37] 2025-06-07 01:22:14,863 | INFO     | sum of square deviations: 13294534758.674349
[2025-06-07 01:22:37] 2025-06-07 01:22:14,865 | INFO     | sum of deviations: 83955215536.26285
[2025-06-07 01:22:37] 2025-06-07 01:22:14,865 | INFO     | mean x: 1749248598.5485713
[2025-06-07 01:22:37] 2025-06-07 01:22:14,865 | INFO     | mean y: 2650927.4257142856
[2025-06-07 01:22:37] 2025-06-07 01:22:14,865 | INFO     | -- intersect: -11043884042.279
[2025-06-07 01:22:37] 2025-06-07 01:22:14,865 | INFO     | intersect: -11043884042.279
[2025-06-07 01:22:37] 2025-06-07 01:22:14,866 | INFO     | chi2: 6.356409000488238
[2025-06-07 01:22:37] 2025-06-07 01:22:14,878 | INFO     | sum of square deviations: 12732864296.162317
[2025-06-07 01:22:37] 2025-06-07 01:22:14,880 | INFO     | sum of deviations: 106408734957.3884
[2025-06-07 01:22:37] 2025-06-07 01:22:14,880 | INFO     | mean x: 1749248446.0492754
[2025-06-07 01:22:37] 2025-06-07 01:22:14,880 | INFO     | mean y: 2656949.1536231884
[2025-06-07 01:22:37] 2025-06-07 01:22:14,880 | INFO     | -- intersect: -14615838146.752016
[2025-06-07 01:22:37] 2025-06-07 01:22:14,880 | INFO     | intersect: -14615838146.752016
[2025-06-07 01:22:37] 2025-06-07 01:22:14,881 | INFO     | chi2: 5.68838492248938
[2025-06-07 01:22:37] 2025-06-07 01:22:14,881 | INFO     | current chi2=5.68838492248938 (change=10.509457115606418 %)
[2025-06-07 01:22:37] 2025-06-07 01:22:14,881 | INFO     | right removable region: 344
[2025-06-07 01:22:37] 2025-06-07 01:22:14,881 | INFO     | sum of square deviations: 12732853926.162317
[2025-06-07 01:22:37] 2025-06-07 01:22:14,891 | INFO     | sum of deviations: -36709214276.773895
[2025-06-07 01:22:37] 2025-06-07 01:22:14,891 | INFO     | mean x: 1749248751.0492754
[2025-06-07 01:22:37] 2025-06-07 01:22:14,891 | INFO     | mean y: 2683653.104347826
[2025-06-07 01:22:37] 2025-06-07 01:22:14,891 | INFO     | -- intersect: 5045822261.150952
[2025-06-07 01:22:37] 2025-06-07 01:22:14,891 | INFO     | intersect: 5045822261.150952
[2025-06-07 01:22:37] 2025-06-07 01:22:14,892 | INFO     | chi2: 2.3513791396553376
[2025-06-07 01:22:37] 2025-06-07 01:22:14,892 | INFO     | current chi2=2.3513791396553376 (change=63.00774321673248 %)
[2025-06-07 01:22:37] 2025-06-07 01:22:14,892 | INFO     | sum of square deviations: 12187219906.150015
[2025-06-07 01:22:37] 2025-06-07 01:22:14,894 | INFO     | sum of deviations: -93003325643.0
[2025-06-07 01:22:37] 2025-06-07 01:22:14,906 | INFO     | mean x: 1749248903.55
[2025-06-07 01:22:37] 2025-06-07 01:22:14,906 | INFO     | mean y: 2699336.1764705884
[2025-06-07 01:22:37] 2025-06-07 01:22:14,906 | INFO     | -- intersect: 13351598154.80084
[2025-06-07 01:22:37] 2025-06-07 01:22:14,906 | INFO     | intersect: 13351598154.80084
[2025-06-07 01:22:37] 2025-06-07 01:22:14,907 | INFO     | chi2: 1.3431552397265345
[2025-06-07 01:22:37] 2025-06-07 01:22:14,907 | INFO     | current chi2=1.3431552397265345 (change=42.877980965527634 %)
[2025-06-07 01:22:37] 2025-06-07 01:22:14,907 | INFO     | sum of square deviations: 11657400136.137316
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | sum of deviations: -113624029287.47168
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | mean x: 1749249056.0507462
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | mean y: 2705264.0865671644
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | -- intersect: 17052538301.871466
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | intersect: 17052538301.871466
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | chi2: 1.186188543598515
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | current chi2=1.186188543598515 (change=11.686415053555365 %)
[2025-06-07 01:22:37] 2025-06-07 01:22:14,909 | INFO     | left removable region: 30
[2025-06-07 01:22:37] 2025-06-07 01:22:14,910 | INFO     | sum of square deviations: 9599691615.96182
[2025-06-07 01:22:37] 2025-06-07 01:22:14,923 | INFO     | sum of deviations: -74455330644.29951
[2025-06-07 01:22:37] 2025-06-07 01:22:14,924 | INFO     | mean x: 1749249330.5414014
[2025-06-07 01:22:37] 2025-06-07 01:22:14,924 | INFO     | mean y: 2707553.407643312
[2025-06-07 01:22:37] 2025-06-07 01:22:14,924 | INFO     | -- intersect: 13569907677.651468
[2025-06-07 01:22:37] 2025-06-07 01:22:14,924 | INFO     | intersect: 13569907677.651468
[2025-06-07 01:22:37] 2025-06-07 01:22:14,924 | INFO     | chi2: 0.37805547312327004
[2025-06-07 01:22:37] 2025-06-07 01:22:14,924 | INFO     | -- intersect: 13569907677.651468
[2025-06-07 01:22:37] 2025-06-07 01:22:14,924 | INFO     | current memory leak: -7.76 B/s (using 314 data points, chi2=0.38)
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | ..............................
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . Timing measurements:
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . get job = 0 s
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . initial setup = 10 s
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . payload setup = 107 s
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . stage-in = 0 s
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . payload execution = 21347 s
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . stage-out = 2 s
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | . log creation = 0 s
[2025-06-07 01:22:37] 2025-06-07 01:22:14,925 | INFO     | ..............................
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | 
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | job summary report
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | --------------------------------------------------
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | PanDA job id: 6678363372
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | task id: 45006595
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | errors: (none)
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | pilot state: finished 
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | transexitcode: 0
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | exeerrorcode: 0
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | exeerrordiag: 
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | exitcode: 0
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | exitmsg: OK
[2025-06-07 01:22:37] 2025-06-07 01:22:15,251 | INFO     | cpuconsumptiontime: 30977 s
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | nevents: 400
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | neventsw: 0
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | pid: 1343956
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | pgrp: 1343956
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | corecount: 12
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | event service: False
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | sizes: {0: 2396515, 1: 2397223, 2: 2397422, 3: 2397422, 13: 2397450, 24: 2397506, 35: 2397662, 44: 2397896, 46: 2397924, 21458: 2430840, 21462: 2439827, 21466: 244
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | --------------------------------------------------
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | 
[2025-06-07 01:22:37] 2025-06-07 01:22:15,252 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-07 01:22:37] 2025-06-07 01:22:15,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 01:22:37] 2025-06-07 01:22:15,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 01:22:37] 2025-06-07 01:22:15,332 | INFO     | job 6678363372 has completed (purged errors)
[2025-06-07 01:22:37] 2025-06-07 01:22:15,332 | INFO     | overall cleanup function is called
[2025-06-07 01:22:37] 2025-06-07 01:22:15,658 | INFO     | 21614s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-07 01:22:37] 2025-06-07 01:22:16,338 | INFO     | --- collectZombieJob: --- 10, [1343956]
[2025-06-07 01:22:37] 2025-06-07 01:22:16,340 | INFO     | zombie collector waiting for pid 1343956
[2025-06-07 01:22:37] 2025-06-07 01:22:16,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 01:22:37] 2025-06-07 01:22:16,340 | INFO     | collected zombie processes
[2025-06-07 01:22:37] 2025-06-07 01:22:16,340 | INFO     | will attempt to kill all subprocesses of pid=1343956
[2025-06-07 01:22:37] 2025-06-07 01:22:16,461 | INFO     | process IDs to be killed: [1343956] (in reverse order)
[2025-06-07 01:22:37] 2025-06-07 01:22:16,623 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 01:22:37] 2025-06-07 01:22:16,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 01:22:37] 2025-06-07 01:22:16,642 | INFO     | did not find any defunct processes belonging to 1343956
[2025-06-07 01:22:37] 2025-06-07 01:22:16,647 | INFO     | did not find any defunct processes belonging to 1343956
[2025-06-07 01:22:37] 2025-06-07 01:22:16,647 | INFO     | ready for new job
[2025-06-07 01:22:37] 2025-06-07 01:22:16,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 01:22:37] 2025-06-07 01:22:16,648 | INFO     | **************************************
[2025-06-07 01:22:37] 2025-06-07 01:22:16,648 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 01:22:37] 2025-06-07 01:22:16,648 | INFO     | **************************************
[2025-06-07 01:22:37] 2025-06-07 01:22:16,648 | INFO     | 
[2025-06-07 01:22:37] 2025-06-07 01:22:16,666 | INFO     | architecture information:
[2025-06-07 01:22:37] 2025-06-07 01:22:16,666 | INFO     | executing command: cat /etc/os-release
[2025-06-07 01:22:37] 2025-06-07 01:22:16,722 | INFO     | cat /etc/os-release:
[2025-06-07 01:22:37] NAME="CentOS Linux"
[2025-06-07 01:22:37] VERSION="7 (Core)"
[2025-06-07 01:22:37] ID="centos"
[2025-06-07 01:22:37] ID_LIKE="rhel fedora"
[2025-06-07 01:22:37] VERSION_ID="7"
[2025-06-07 01:22:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 01:22:37] ANSI_COLOR="0;31"
[2025-06-07 01:22:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 01:22:37] HOME_URL="https://www.centos.org/"
[2025-06-07 01:22:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 01:22:37] 
[2025-06-07 01:22:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 01:22:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 01:22:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 01:22:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 01:22:37] 
[2025-06-07 01:22:37] 2025-06-07 01:22:16,722 | INFO     | **************************************
[2025-06-07 01:22:37] 2025-06-07 01:22:17,226 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-07 01:22:37] 2025-06-07 01:22:17,302 | INFO     | sufficient remaining disk space (183707369472 B)
[2025-06-07 01:22:37] 2025-06-07 01:22:17,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 01:22:37] 2025-06-07 01:22:17,303 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 01:22:37] 2025-06-07 01:22:17,303 | INFO     | update_server=False
[2025-06-07 01:22:37] 2025-06-07 01:22:17,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 01:22:37] 2025-06-07 01:22:17,303 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-07 01:22:37] 2025-06-07 01:22:17,303 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 01:22:37] 2025-06-07 01:22:17,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 01:22:37] 2025-06-07 01:22:17,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 01:22:37] 2025-06-07 01:22:17,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 01:22:37] 2025-06-07 01:22:17,722 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-07 01:22:37] 2025-06-07 01:22:17,722 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-07 01:22:37] 2025-06-07 01:22:17,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 01:22:37] 2025-06-07 01:22:17,722 | INFO     | will abort loop
[2025-06-07 01:22:37] 2025-06-07 01:22:17,898 | INFO     | all payload control threads have been joined
[2025-06-07 01:22:37] 2025-06-07 01:22:17,982 | INFO     | all data control threads have been joined
[2025-06-07 01:22:37] 2025-06-07 01:22:18,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 01:22:37] 2025-06-07 01:22:18,306 | INFO     | [job] retrieve thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:18,382 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:18,418 | INFO     | all job control threads have been joined
[2025-06-07 01:22:37] 2025-06-07 01:22:18,538 | INFO     | [payload] failed_post thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:18,538 | INFO     | [payload] validate_post thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:18,730 | INFO     | [job] job monitor thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:18,746 | INFO     | [job] validate thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:18,902 | INFO     | [payload] control thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:18,986 | INFO     | [data] control thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:19,423 | INFO     | [job] control thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:19,638 | INFO     | [data] copytool_out thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:19,678 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:19,682 | INFO     | [data] copytool_in thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:19,694 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:20,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 01:22:37] 2025-06-07 01:22:21,278 | INFO     | [job] queue monitor thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:22,182 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:28,298 | INFO     | job.realtimelogging is not enabled
[2025-06-07 01:22:37] 2025-06-07 01:22:29,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 01:22:37] 2025-06-07 01:22:30,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374508906304)>', '<ExcThread(monitor, started 140374051890944)>']
[2025-06-07 01:22:37] 2025-06-07 01:22:31,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 01:22:37] 2025-06-07 01:22:31,358 | INFO     | [monitor] control thread has ended
[2025-06-07 01:22:37] 2025-06-07 01:22:35,966 | INFO     | all workflow threads have been joined
[2025-06-07 01:22:37] 2025-06-07 01:22:35,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 01:22:37] 2025-06-07 01:22:35,966 | INFO     | traces error code: 0
[2025-06-07 01:22:37] 2025-06-07 01:22:35,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 01:22:37] 2025-06-07 01:22:36,343 [wrapper] ==== pilot stdout END ====
[2025-06-07 01:22:37] 2025-06-07 01:22:36,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 01:22:37] 2025-06-07 01:22:36,395 [wrapper] pilotpid: 1337531
[2025-06-07 01:22:37] 2025-06-07 01:22:36,422 [wrapper] Pilot exit status: 0
[2025-06-07 01:22:37] 2025-06-07 01:22:36,534 [wrapper] pandaids: 6678363372
[2025-06-07 01:22:37] 2025-06-07 01:22:36,635 [wrapper] cleanup supervisor_pilot 1419950 1337532
[2025-06-07 01:22:37] 2025-06-07 01:22:36,674 [wrapper] Test setup, not cleaning
[2025-06-07 01:22:37] 2025-06-07 01:22:36,695 [wrapper] apfmon messages muted
[2025-06-07 01:22:37] 2025-06-07 01:22:36,723 [wrapper] ==== wrapper stdout END ====
[2025-06-07 01:22:37] 2025-06-07 01:22:36,751 [wrapper] ==== wrapper stderr END ====
[2025-06-07 01:22:37]  *** Error codes and diagnostics ***
[2025-06-07 01:22:37]     "exeErrorCode": 0,
[2025-06-07 01:22:37]     "exeErrorDiag": "",
[2025-06-07 01:22:37]     "pilotErrorCode": 0,
[2025-06-07 01:22:37]     "pilotErrorDiag": "",
[2025-06-07 01:22:37]  *** Listing of results directory ***
[2025-06-07 01:22:37] total 392176
[2025-06-07 01:22:37] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-07 01:22:37] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:22 queuedata.json
[2025-06-07 01:22:37] -rwx------ 1 boinc boinc     37140 Jun  4 05:23 runpilot2-wrapper.sh
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc       100 Jun  6 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 01:22:37] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 19:20 run_atlas
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc       105 Jun  6 19:20 job.xml
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc      9280 Jun  6 19:20 init_data.xml
[2025-06-07 01:22:37] -rw-r--r-- 2 boinc boinc 215528363 Jun  6 19:20 EVNT.45006593._002138.pool.root.1
[2025-06-07 01:22:37] -rw-r--r-- 2 boinc boinc     15093 Jun  6 19:20 start_atlas.sh
[2025-06-07 01:22:37] drwxrwx--x 2 boinc boinc      4096 Jun  6 19:20 shared
[2025-06-07 01:22:37] -rw-r--r-- 2 boinc boinc    508886 Jun  6 19:20 input.tar.gz
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc         0 Jun  6 19:20 boinc_lockfile
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc      2526 Jun  6 19:20 pandaJob.out
[2025-06-07 01:22:37] -rw------- 1 boinc boinc    985748 Jun  6 19:22 agis_schedconf.cvmfs.json
[2025-06-07 01:22:37] drwx------ 4 boinc boinc      4096 Jun  6 19:22 pilot3
[2025-06-07 01:22:37] -rw------- 1 boinc boinc 177344567 Jun  7 01:19 HITS.45006595._053412.pool.root.1
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc       530 Jun  7 01:20 boinc_task_state.xml
[2025-06-07 01:22:37] -rw------- 1 boinc boinc      1019 Jun  7 01:21 memory_monitor_summary.json
[2025-06-07 01:22:37] -rw------- 1 boinc boinc   1598969 Jun  7 01:21 agis_ddmendpoints.agis.ALL.json
[2025-06-07 01:22:37] -rw------- 1 boinc boinc    498452 Jun  7 01:21 log.45006595._053412.job.log.tgz.1
[2025-06-07 01:22:37] -rw------- 1 boinc boinc        95 Jun  7 01:21 pilot_heartbeat.json
[2025-06-07 01:22:37] -rw------- 1 boinc boinc      7653 Jun  7 01:22 heartbeat.json
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc      8192 Jun  7 01:22 boinc_mmap_file
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc        28 Jun  7 01:22 wrapper_checkpoint.txt
[2025-06-07 01:22:37] -rw------- 1 boinc boinc      4758 Jun  7 01:22 pilotlog.txt
[2025-06-07 01:22:37] -rw------- 1 boinc boinc   1940201 Jun  7 01:22 log.45006595._053412.job.log.1
[2025-06-07 01:22:37] -rw------- 1 boinc boinc       357 Jun  7 01:22 output.list
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc       620 Jun  7 01:22 runtime_log
[2025-06-07 01:22:37] -rw------- 1 boinc boinc   2457600 Jun  7 01:22 result.tar.gz
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc      8944 Jun  7 01:22 runtime_log.err
[2025-06-07 01:22:37] -rw------- 1 boinc boinc       652 Jun  7 01:22 HN0MDmbmvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOOnKDmNcDicn.diag
[2025-06-07 01:22:37] -rw-rw-r-- 1 boinc boinc     21112 Jun  7 01:22 stderr.txt
[2025-06-07 01:22:37] HITS file was successfully produced:
[2025-06-07 01:22:37] -rw------- 1 boinc boinc 177344567 Jun  7 01:19 shared/HITS.pool.root.1
[2025-06-07 01:22:37]  *** Contents of shared directory: ***
[2025-06-07 01:22:37] total 386596
[2025-06-07 01:22:37] -rw-r--r-- 2 boinc boinc 215528363 Jun  6 19:20 ATLAS.root_0
[2025-06-07 01:22:37] -rw-r--r-- 2 boinc boinc     15093 Jun  6 19:20 start_atlas.sh
[2025-06-07 01:22:37] -rw-r--r-- 2 boinc boinc    508886 Jun  6 19:20 input.tar.gz
[2025-06-07 01:22:37] -rw------- 1 boinc boinc 177344567 Jun  7 01:19 HITS.pool.root.1
[2025-06-07 01:22:37] -rw------- 1 boinc boinc   2457600 Jun  7 01:22 result.tar.gz
01:22:38 (1333946): run_atlas exited; CPU time 31085.796250
01:22:38 (1333946): called boinc_finish(0)

</stderr_txt>
]]>

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