Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:22:29 (3847738): wrapper (7.7.26015): starting
06:22:29 (3847738): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:22:29] Arguments: --nthreads 8
[2025-06-04 06:22:29] Threads: 8
[2025-06-04 06:22:29] Checking for CVMFS
[2025-06-04 06:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:22:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:22:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:22:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:22:30] 2.12.6.0 3074763 23406 343688 146777 0 357 17812555 32935937 12669 16776704 0 60535358 99.625 62695726 10370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:22:30] CVMFS is ok
[2025-06-04 06:22:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:22:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:22:30] Further information can be found at the LHC@home message board.
[2025-06-04 06:22:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:22:30] Checking for apptainer binary...
[2025-06-04 06:22:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:22:30] Running /usr/bin/apptainer --version
[2025-06-04 06:22:30] apptainer version 1.4.1-1.el9
[2025-06-04 06:22:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:22:31] c6-12-25-1.aglt2.org
[2025-06-04 06:22:31] apptainer works
[2025-06-04 06:22:31] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:22:31] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:22:31] Starting ATLAS job with PandaID=6678363417
[2025-06-04 06:22:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:00:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:00:21] 2025-06-04 14:00:04,968 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:00:21] 2025-06-04 14:00:04,969 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678363417/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:00:21] 2025-06-04 14:00:04,971 | INFO     | extracted standard info from prmon json
[2025-06-04 10:00:21] 2025-06-04 14:00:04,971 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:00:21] 2025-06-04 14:00:04,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:00:21] 2025-06-04 14:00:04,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:00:21] 2025-06-04 14:00:04,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:00:21] 2025-06-04 14:00:04,983 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:00:21] 2025-06-04 14:00:04,985 | INFO     | sum of square deviations: 2996460300.9952865
[2025-06-04 10:00:21] 2025-06-04 14:00:04,988 | INFO     | sum of deviations: 40651455235.97186
[2025-06-04 10:00:21] 2025-06-04 14:00:04,989 | INFO     | mean x: 1749039075.004695
[2025-06-04 10:00:21] 2025-06-04 14:00:04,989 | INFO     | mean y: 2122614.028169014
[2025-06-04 10:00:21] 2025-06-04 14:00:04,989 | INFO     | -- intersect: -23726202316.524895
[2025-06-04 10:00:21] 2025-06-04 14:00:04,989 | INFO     | intersect: -23726202316.524895
[2025-06-04 10:00:21] 2025-06-04 14:00:04,990 | INFO     | chi2: 4.81628648780606
[2025-06-04 10:00:21] 2025-06-04 14:00:04,991 | INFO     | sum of square deviations: 2790354415.9951944
[2025-06-04 10:00:21] 2025-06-04 14:00:04,995 | INFO     | sum of deviations: 50720419292.84613
[2025-06-04 10:00:21] 2025-06-04 14:00:04,995 | INFO     | mean x: 1749038922.5048077
[2025-06-04 10:00:21] 2025-06-04 14:00:04,996 | INFO     | mean y: 2129901.153846154
[2025-06-04 10:00:21] 2025-06-04 14:00:04,996 | INFO     | -- intersect: -31790242781.12138
[2025-06-04 10:00:21] 2025-06-04 14:00:04,996 | INFO     | intersect: -31790242781.12138
[2025-06-04 10:00:21] 2025-06-04 14:00:04,997 | INFO     | chi2: 4.175323801514324
[2025-06-04 10:00:21] 2025-06-04 14:00:04,997 | INFO     | current chi2=4.175323801514324 (change=13.308234215604376 %)
[2025-06-04 10:00:21] 2025-06-04 14:00:04,998 | INFO     | right removable region: 207
[2025-06-04 10:00:21] 2025-06-04 14:00:04,998 | INFO     | sum of square deviations: 2790353805.9951944
[2025-06-04 10:00:21] 2025-06-04 14:00:05,002 | INFO     | sum of deviations: -3079672943.048066
[2025-06-04 10:00:21] 2025-06-04 14:00:05,002 | INFO     | mean x: 1749039227.5048077
[2025-06-04 10:00:21] 2025-06-04 14:00:05,002 | INFO     | mean y: 2154861.048076923
[2025-06-04 10:00:21] 2025-06-04 14:00:05,003 | INFO     | -- intersect: 1932544037.3966777
[2025-06-04 10:00:21] 2025-06-04 14:00:05,003 | INFO     | intersect: 1932544037.3966777
[2025-06-04 10:00:21] 2025-06-04 14:00:05,004 | INFO     | chi2: 2.3853085677513723
[2025-06-04 10:00:21] 2025-06-04 14:00:05,004 | INFO     | current chi2=2.3853085677513723 (change=50.474113743222524 %)
[2025-06-04 10:00:21] 2025-06-04 14:00:05,005 | INFO     | sum of square deviations: 2593921910.9950833
[2025-06-04 10:00:21] 2025-06-04 14:00:05,009 | INFO     | sum of deviations: -28372192892.9064
[2025-06-04 10:00:21] 2025-06-04 14:00:05,009 | INFO     | mean x: 1749039380.0049262
[2025-06-04 10:00:21] 2025-06-04 14:00:05,009 | INFO     | mean y: 2174477.906403941
[2025-06-04 10:00:21] 2025-06-04 14:00:05,009 | INFO     | -- intersect: 19133082951.458843
[2025-06-04 10:00:21] 2025-06-04 14:00:05,010 | INFO     | intersect: 19133082951.458843
[2025-06-04 10:00:21] 2025-06-04 14:00:05,010 | INFO     | chi2: 1.5778585686142301
[2025-06-04 10:00:21] 2025-06-04 14:00:05,011 | INFO     | current chi2=1.5778585686142301 (change=33.85096628811946 %)
[2025-06-04 10:00:21] 2025-06-04 14:00:05,012 | INFO     | sum of square deviations: 2406932053.49495
[2025-06-04 10:00:21] 2025-06-04 14:00:05,015 | INFO     | sum of deviations: -43526073524.31313
[2025-06-04 10:00:21] 2025-06-04 14:00:05,015 | INFO     | mean x: 1749039532.5050504
[2025-06-04 10:00:21] 2025-06-04 14:00:05,015 | INFO     | mean y: 2186808.8131313133
[2025-06-04 10:00:21] 2025-06-04 14:00:05,015 | INFO     | -- intersect: 31631174082.551647
[2025-06-04 10:00:21] 2025-06-04 14:00:05,016 | INFO     | intersect: 31631174082.551647
[2025-06-04 10:00:21] 2025-06-04 14:00:05,017 | INFO     | chi2: 1.2324884380029175
[2025-06-04 10:00:21] 2025-06-04 14:00:05,017 | INFO     | current chi2=1.2324884380029175 (change=21.88853535299031 %)
[2025-06-04 10:00:21] 2025-06-04 14:00:05,017 | INFO     | left removable region: 30
[2025-06-04 10:00:21] 2025-06-04 14:00:05,018 | INFO     | sum of square deviations: 1719433962.9943547
[2025-06-04 10:00:21] 2025-06-04 14:00:05,021 | INFO     | sum of deviations: -13214388205.197746
[2025-06-04 10:00:21] 2025-06-04 14:00:05,021 | INFO     | mean x: 1749039807.0056498
[2025-06-04 10:00:21] 2025-06-04 14:00:05,021 | INFO     | mean y: 2177501.197740113
[2025-06-04 10:00:21] 2025-06-04 14:00:05,021 | INFO     | -- intersect: 13444095884.539972
[2025-06-04 10:00:21] 2025-06-04 14:00:05,022 | INFO     | intersect: 13444095884.539972
[2025-06-04 10:00:21] 2025-06-04 14:00:05,022 | INFO     | chi2: 0.39316829119484076
[2025-06-04 10:00:21] 2025-06-04 14:00:05,023 | INFO     | -- intersect: 13444095884.539972
[2025-06-04 10:00:21] 2025-06-04 14:00:05,023 | INFO     | current memory leak: -7.69 B/s (using 177 data points, chi2=0.39)
[2025-06-04 10:00:21] 2025-06-04 14:00:05,024 | INFO     | ..............................
[2025-06-04 10:00:21] 2025-06-04 14:00:05,025 | INFO     | . Timing measurements:
[2025-06-04 10:00:21] 2025-06-04 14:00:05,025 | INFO     | . get job = 0 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,025 | INFO     | . initial setup = 4 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,025 | INFO     | . payload setup = 11 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,026 | INFO     | . stage-in = 0 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,026 | INFO     | . payload execution = 12985 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,026 | INFO     | . stage-out = 4 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,026 | INFO     | . log creation = 0 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,026 | INFO     | ..............................
[2025-06-04 10:00:21] 2025-06-04 14:00:05,396 | INFO     | 
[2025-06-04 10:00:21] 2025-06-04 14:00:05,397 | INFO     | job summary report
[2025-06-04 10:00:21] 2025-06-04 14:00:05,397 | INFO     | --------------------------------------------------
[2025-06-04 10:00:21] 2025-06-04 14:00:05,397 | INFO     | PanDA job id: 6678363417
[2025-06-04 10:00:21] 2025-06-04 14:00:05,397 | INFO     | task id: 45006595
[2025-06-04 10:00:21] 2025-06-04 14:00:05,397 | INFO     | errors: (none)
[2025-06-04 10:00:21] 2025-06-04 14:00:05,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | pilot state: finished 
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | transexitcode: 0
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | exeerrorcode: 0
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | exeerrordiag: 
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | exitcode: 0
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | exitmsg: OK
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | cpuconsumptiontime: 91430 s
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | nevents: 400
[2025-06-04 10:00:21] 2025-06-04 14:00:05,398 | INFO     | neventsw: 0
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | pid: 3864077
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | pgrp: 3864077
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | corecount: 8
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | event service: False
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | sizes: {0: 2404357, 1: 2405042, 2: 2405241, 10: 2405447, 13: 2405475, 13001: 2435604, 13005: 2445598, 13006: 2445654, 13016: 2445824}
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | --------------------------------------------------
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | 
[2025-06-04 10:00:21] 2025-06-04 14:00:05,399 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:00:21] 2025-06-04 14:00:05,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,438 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:00:21] 2025-06-04 14:00:05,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:00:21] 2025-06-04 14:00:05,438 | INFO     | job 6678363417 has completed (purged errors)
[2025-06-04 10:00:21] 2025-06-04 14:00:05,439 | INFO     | overall cleanup function is called
[2025-06-04 10:00:21] 2025-06-04 14:00:06,448 | INFO     | --- collectZombieJob: --- 10, [3864077]
[2025-06-04 10:00:21] 2025-06-04 14:00:06,449 | INFO     | zombie collector waiting for pid 3864077
[2025-06-04 10:00:21] 2025-06-04 14:00:06,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:00:21] 2025-06-04 14:00:06,449 | INFO     | collected zombie processes
[2025-06-04 10:00:21] 2025-06-04 14:00:06,450 | INFO     | will attempt to kill all subprocesses of pid=3864077
[2025-06-04 10:00:21] 2025-06-04 14:00:07,345 | INFO     | process IDs to be killed: [3864077] (in reverse order)
[2025-06-04 10:00:21] 2025-06-04 14:00:07,593 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:00:21] 2025-06-04 14:00:07,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:00:21] 2025-06-04 14:00:07,626 | INFO     | did not find any defunct processes belonging to 3864077
[2025-06-04 10:00:21] 2025-06-04 14:00:07,657 | INFO     | did not find any defunct processes belonging to 3864077
[2025-06-04 10:00:21] 2025-06-04 14:00:07,658 | INFO     | ready for new job
[2025-06-04 10:00:21] 2025-06-04 14:00:07,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:00:21] 2025-06-04 14:00:07,662 | INFO     | **************************************
[2025-06-04 10:00:21] 2025-06-04 14:00:07,664 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:00:21] 2025-06-04 14:00:07,664 | INFO     | **************************************
[2025-06-04 10:00:21] 2025-06-04 14:00:07,664 | INFO     | 
[2025-06-04 10:00:21] 2025-06-04 14:00:07,690 | INFO     | architecture information:
[2025-06-04 10:00:21] 2025-06-04 14:00:07,692 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:00:21] 2025-06-04 14:00:07,723 | INFO     | cat /etc/os-release:
[2025-06-04 10:00:21] NAME="CentOS Linux"
[2025-06-04 10:00:21] VERSION="7 (Core)"
[2025-06-04 10:00:21] ID="centos"
[2025-06-04 10:00:21] ID_LIKE="rhel fedora"
[2025-06-04 10:00:21] VERSION_ID="7"
[2025-06-04 10:00:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:00:21] ANSI_COLOR="0;31"
[2025-06-04 10:00:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:00:21] HOME_URL="https://www.centos.org/"
[2025-06-04 10:00:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:00:21] 
[2025-06-04 10:00:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:00:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:00:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:00:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:00:21] 
[2025-06-04 10:00:21] 2025-06-04 14:00:07,724 | INFO     | **************************************
[2025-06-04 10:00:21] 2025-06-04 14:00:08,227 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:00:21] 2025-06-04 14:00:08,265 | INFO     | sufficient remaining disk space (75581358080 B)
[2025-06-04 10:00:21] 2025-06-04 14:00:08,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:00:21] 2025-06-04 14:00:08,266 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:00:21] 2025-06-04 14:00:08,267 | INFO     | update_server=False
[2025-06-04 10:00:21] 2025-06-04 14:00:08,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:00:21] 2025-06-04 14:00:08,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:00:21] 2025-06-04 14:00:08,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:00:21] 2025-06-04 14:00:08,268 | INFO     | aborting loop
[2025-06-04 10:00:21] 2025-06-04 14:00:08,473 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:00:21] 2025-06-04 14:00:08,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:00:21] 2025-06-04 14:00:08,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:00:21] 2025-06-04 14:00:08,475 | INFO     | all job control threads have been joined
[2025-06-04 10:00:21] 2025-06-04 14:00:09,054 | INFO     | all payload control threads have been joined
[2025-06-04 10:00:21] 2025-06-04 14:00:09,273 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,274 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,294 | INFO     | all data control threads have been joined
[2025-06-04 10:00:21] 2025-06-04 14:00:09,305 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,345 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,375 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,481 | INFO     | [job] control thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,503 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,645 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:09,865 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:10,060 | INFO     | [payload] control thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:10,095 | INFO     | [job] validate thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:10,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:00:21] 2025-06-04 14:00:10,271 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:10,300 | INFO     | [data] control thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:10,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:00:21] 2025-06-04 14:00:11,206 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:14,537 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:00:21] 2025-06-04 14:00:15,696 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985052452672)>', '<ExcThread(monitor, started 139984552044288)>']
[2025-06-04 10:00:21] 2025-06-04 14:00:16,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:00:21] 2025-06-04 14:00:16,515 | INFO     | [monitor] control thread has ended
[2025-06-04 10:00:21] 2025-06-04 14:00:20,721 | INFO     | all workflow threads have been joined
[2025-06-04 10:00:21] 2025-06-04 14:00:20,722 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:00:21] 2025-06-04 14:00:20,723 | INFO     | traces error code: 0
[2025-06-04 10:00:21] 2025-06-04 14:00:20,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:00:21] 2025-06-04 14:00:20,988 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:00:21] 2025-06-04 14:00:20,996 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:00:21] 2025-06-04 14:00:21,003 [wrapper] pilotpid: 3853973
[2025-06-04 10:00:21] 2025-06-04 14:00:21,008 [wrapper] Pilot exit status: 0
[2025-06-04 10:00:21] 2025-06-04 14:00:21,034 [wrapper] pandaids: 6678363417
[2025-06-04 10:00:21] 2025-06-04 14:00:21,156 [wrapper] cleanup supervisor_pilot  219433 3853974
[2025-06-04 10:00:21] 2025-06-04 14:00:21,162 [wrapper] Test setup, not cleaning
[2025-06-04 10:00:21] 2025-06-04 14:00:21,169 [wrapper] apfmon messages muted
[2025-06-04 10:00:21] 2025-06-04 14:00:21,175 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:00:21] 2025-06-04 14:00:21,182 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:00:21]  *** Error codes and diagnostics ***
[2025-06-04 10:00:21]     "exeErrorCode": 0,
[2025-06-04 10:00:21]     "exeErrorDiag": "",
[2025-06-04 10:00:21]     "pilotErrorCode": 0,
[2025-06-04 10:00:21]     "pilotErrorDiag": "",
[2025-06-04 10:00:21]  *** Listing of results directory ***
[2025-06-04 10:00:21] total 387892
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:22 queuedata.json
[2025-06-04 10:00:21] -rwx------. 1 boincer umatlas     37140 Jun  4 01:24 runpilot2-wrapper.sh
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:00:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:22 run_atlas
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:22 job.xml
[2025-06-04 10:00:21] -rw-r--r--. 2 boincer umatlas 215787374 Jun  4 06:22 EVNT.45006593._002139.pool.root.1
[2025-06-04 10:00:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:22 start_atlas.sh
[2025-06-04 10:00:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:22 shared
[2025-06-04 10:00:21] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 06:22 input.tar.gz
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:22 boinc_lockfile
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas      2526 Jun  4 06:22 pandaJob.out
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas    986812 Jun  4 06:22 agis_schedconf.cvmfs.json
[2025-06-04 10:00:21] drwx------. 4 boincer umatlas      4096 Jun  4 06:22 pilot3
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas      6858 Jun  4 09:57 init_data.xml
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas 174482039 Jun  4 09:58 HITS.45006595._053457.pool.root.1
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas       530 Jun  4 09:58 boinc_task_state.xml
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas        95 Jun  4 09:59 pilot_heartbeat.json
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas      1040 Jun  4 09:59 memory_monitor_summary.json
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas    403758 Jun  4 09:59 log.45006595._053457.job.log.tgz.1
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:59 boinc_mmap_file
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas        28 Jun  4 09:59 wrapper_checkpoint.txt
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas      7725 Jun  4 10:00 heartbeat.json
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas      4353 Jun  4 10:00 pilotlog.txt
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas   1144243 Jun  4 10:00 log.45006595._053457.job.log.1
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas       357 Jun  4 10:00 output.list
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:00 runtime_log
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas   1566720 Jun  4 10:00 result.tar.gz
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas       659 Jun  4 10:00 ywxMDmmmvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmamaKDmYjkOBo.diag
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas      8670 Jun  4 10:00 runtime_log.err
[2025-06-04 10:00:21] -rw-r--r--. 1 boincer umatlas     20918 Jun  4 10:00 stderr.txt
[2025-06-04 10:00:21] HITS file was successfully produced:
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas 174482039 Jun  4 09:58 shared/HITS.pool.root.1
[2025-06-04 10:00:21]  *** Contents of shared directory: ***
[2025-06-04 10:00:21] total 383184
[2025-06-04 10:00:21] -rw-r--r--. 2 boincer umatlas 215787374 Jun  4 06:22 ATLAS.root_0
[2025-06-04 10:00:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:22 start_atlas.sh
[2025-06-04 10:00:21] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 06:22 input.tar.gz
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas 174482039 Jun  4 09:58 HITS.pool.root.1
[2025-06-04 10:00:21] -rw-------. 1 boincer umatlas   1566720 Jun  4 10:00 result.tar.gz
10:00:22 (3847738): run_atlas exited; CPU time 92706.231492
10:00:22 (3847738): called boinc_finish(0)

</stderr_txt>
]]>

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