Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:23:46 (8890): wrapper (7.7.26015): starting
06:23:46 (8890): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:23:46] Arguments: --nthreads 8
[2025-06-04 06:23:46] Threads: 8
[2025-06-04 06:23:46] Checking for CVMFS
[2025-06-04 06:23:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:23:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:23:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:23:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:23:47] 2.11.2.0 3213 440494 241692 146777 3 56 14679325 20275201 917 130560 0 130017267 99.991 19303304 18161 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:23:47] CVMFS is ok
[2025-06-04 06:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:23:47] Further information can be found at the LHC@home message board.
[2025-06-04 06:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:23:47] Checking for apptainer binary...
[2025-06-04 06:23:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:23:47] Running /usr/bin/apptainer --version
[2025-06-04 06:23:47] apptainer version 1.3.2-1.el7
[2025-06-04 06:23:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:23:47] c-205-38.aglt2.org
[2025-06-04 06:23:47] apptainer works
[2025-06-04 06:23:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:23:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:23:47] Starting ATLAS job with PandaID=6678363289
[2025-06-04 06:23:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:12:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:12:59]  lfn=log.45006595._053329.job.log.tgz.1
[2025-06-04 07:12:59]  mtime=0
[2025-06-04 07:12:59]  protocol_id=None
[2025-06-04 07:12:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:12:59]  replicas=None
[2025-06-04 07:12:59]  scope=mc23_13p6TeV
[2025-06-04 07:12:59]  status=None
[2025-06-04 07:12:59]  status_code=0
[2025-06-04 07:12:59]  storage_token=
[2025-06-04 07:12:59]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678363289/log.45006595._053329.job.log.tgz.1
[2025-06-04 07:12:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/94/log.45006595._053329.job.log.tgz.1
[2025-06-04 07:12:59]  workdir=None
[2025-06-04 07:12:59] ]
[2025-06-04 07:12:59] 2025-06-04 11:12:39,911 | INFO     | transferring file log.45006595._053329.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678363289/log.45006595._053329.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:12:59] 2025-06-04 11:12:39,911 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678363289/log.45006595._053329.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._053329.job
[2025-06-04 07:12:59] 2025-06-04 11:12:39,929 | INFO     | adding to output.list: log.45006595._053329.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/94/log.45006595._053329.job.log.tg
[2025-06-04 07:12:59] 2025-06-04 11:12:39,930 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:12:59] 2025-06-04 11:12:39,930 | INFO     | summary of transferred files:
[2025-06-04 07:12:59] 2025-06-04 11:12:39,930 | INFO     |  -- lfn=log.45006595._053329.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:12:59] 2025-06-04 11:12:39,931 | INFO     | stage-out finished correctly
[2025-06-04 07:12:59] 2025-06-04 11:12:41,177 | INFO     | monitor loop #226: job 0:6678363289 is in state 'finished'
[2025-06-04 07:12:59] 2025-06-04 11:12:41,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:12:59] 2025-06-04 11:12:41,466 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:12:59] 2025-06-04 11:12:42,323 | INFO     | PID=12497 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 07:12:59] 2025-06-04 11:12:42,323 | INFO     | .. there are 2 such processes running
[2025-06-04 07:12:59] 2025-06-04 11:12:43,498 | INFO     | job 6678363289 has state=finished
[2025-06-04 07:12:59] 2025-06-04 11:12:43,499 | INFO     | preparing for final server update for job 6678363289 in state='finished'
[2025-06-04 07:12:59] 2025-06-04 11:12:43,500 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:12:59] 2025-06-04 11:12:43,500 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:12:59] 2025-06-04 11:12:43,500 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:12:59] 2025-06-04 11:12:43,500 | INFO     | job 6678363289 has finished - writing final server update
[2025-06-04 07:12:59] 2025-06-04 11:12:43,501 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:12:59] 2025-06-04 11:12:43,503 | INFO     | executing command: lscpu
[2025-06-04 07:12:59] 2025-06-04 11:12:43,535 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:12:59] 2025-06-04 11:12:43,680 | INFO     | monitor loop #227: job 0:6678363289 is in state 'finished'
[2025-06-04 07:12:59] 2025-06-04 11:12:43,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:12:59] 2025-06-04 11:12:46,183 | INFO     | monitor loop #228: job 0:6678363289 is in state 'finished'
[2025-06-04 07:12:59] 2025-06-04 11:12:46,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:12:59] 2025-06-04 11:12:46,649 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:12:59] 2025-06-04 11:12:46,649 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678363289/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:12:59] 2025-06-04 11:12:46,650 | INFO     | extracted standard info from prmon json
[2025-06-04 07:12:59] 2025-06-04 11:12:46,650 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:12:59] 2025-06-04 11:12:46,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:12:59] 2025-06-04 11:12:46,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:12:59] 2025-06-04 11:12:46,651 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:12:59] 2025-06-04 11:12:46,652 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:12:59] 2025-06-04 11:12:46,652 | INFO     | sum of square deviations: 21358540.0
[2025-06-04 07:12:59] 2025-06-04 11:12:46,652 | INFO     | sum of deviations: -2054742117.0000007
[2025-06-04 07:12:59] 2025-06-04 11:12:46,653 | INFO     | mean x: 1749034180.0
[2025-06-04 07:12:59] 2025-06-04 11:12:46,653 | INFO     | mean y: 2728175.512195122
[2025-06-04 07:12:59] 2025-06-04 11:12:46,653 | INFO     | -- intersect: 168263957347.47623
[2025-06-04 07:12:59] 2025-06-04 11:12:46,653 | INFO     | intersect: 168263957347.47623
[2025-06-04 07:12:59] 2025-06-04 11:12:46,653 | INFO     | chi2: 0.013597244740198008
[2025-06-04 07:12:59] 2025-06-04 11:12:46,653 | INFO     | -- intersect: 168263957347.47623
[2025-06-04 07:12:59] 2025-06-04 11:12:46,653 | INFO     | current memory leak: -96.20 B/s (using 41 data points, chi2=0.01)
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | ..............................
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . Timing measurements:
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . get job = 0 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . initial setup = 2 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . payload setup = 4 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . stage-in = 0 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . payload execution = 2903 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . stage-out = 0 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | . log creation = 0 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,654 | INFO     | ..............................
[2025-06-04 07:12:59] 2025-06-04 11:12:46,722 | INFO     | 
[2025-06-04 07:12:59] 2025-06-04 11:12:46,722 | INFO     | job summary report
[2025-06-04 07:12:59] 2025-06-04 11:12:46,722 | INFO     | --------------------------------------------------
[2025-06-04 07:12:59] 2025-06-04 11:12:46,722 | INFO     | PanDA job id: 6678363289
[2025-06-04 07:12:59] 2025-06-04 11:12:46,722 | INFO     | task id: 45006595
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | errors: (none)
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | pilot state: finished 
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | transexitcode: 0
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | exeerrorcode: 0
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | exeerrordiag: 
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | exitcode: 0
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | exitmsg: OK
[2025-06-04 07:12:59] 2025-06-04 11:12:46,723 | INFO     | cpuconsumptiontime: 21576 s
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | nevents: 400
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | neventsw: 0
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | pid: 18992
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | pgrp: 18992
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | corecount: 8
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | event service: False
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | sizes: {0: 2405013, 1: 2405212, 3: 2405418, 11: 2405446, 2911: 2430803, 2912: 2439744, 2913: 2439928, 2918: 2440098}
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | --------------------------------------------------
[2025-06-04 07:12:59] 2025-06-04 11:12:46,724 | INFO     | 
[2025-06-04 07:12:59] 2025-06-04 11:12:46,725 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 07:12:59] 2025-06-04 11:12:46,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:12:59] 2025-06-04 11:12:46,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,747 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:12:59] 2025-06-04 11:12:46,747 | INFO     | job 6678363289 has completed (purged errors)
[2025-06-04 07:12:59] 2025-06-04 11:12:46,748 | INFO     | overall cleanup function is called
[2025-06-04 07:12:59] 2025-06-04 11:12:47,755 | INFO     | --- collectZombieJob: --- 10, [18992]
[2025-06-04 07:12:59] 2025-06-04 11:12:47,755 | INFO     | zombie collector waiting for pid 18992
[2025-06-04 07:12:59] 2025-06-04 11:12:47,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:12:59] 2025-06-04 11:12:47,756 | INFO     | collected zombie processes
[2025-06-04 07:12:59] 2025-06-04 11:12:47,756 | INFO     | will attempt to kill all subprocesses of pid=18992
[2025-06-04 07:12:59] 2025-06-04 11:12:47,829 | INFO     | process IDs to be killed: [18992] (in reverse order)
[2025-06-04 07:12:59] 2025-06-04 11:12:47,869 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:12:59] 2025-06-04 11:12:47,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:12:59] 2025-06-04 11:12:47,871 | INFO     | did not find any defunct processes belonging to 18992
[2025-06-04 07:12:59] 2025-06-04 11:12:47,873 | INFO     | did not find any defunct processes belonging to 18992
[2025-06-04 07:12:59] 2025-06-04 11:12:47,873 | INFO     | ready for new job
[2025-06-04 07:12:59] 2025-06-04 11:12:47,873 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:12:59] 2025-06-04 11:12:47,875 | INFO     | **************************************
[2025-06-04 07:12:59] 2025-06-04 11:12:47,875 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:12:59] 2025-06-04 11:12:47,875 | INFO     | **************************************
[2025-06-04 07:12:59] 2025-06-04 11:12:47,875 | INFO     | 
[2025-06-04 07:12:59] 2025-06-04 11:12:47,876 | INFO     | architecture information:
[2025-06-04 07:12:59] 2025-06-04 11:12:47,877 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:12:59] 2025-06-04 11:12:47,887 | INFO     | cat /etc/os-release:
[2025-06-04 07:12:59] NAME="CentOS Linux"
[2025-06-04 07:12:59] VERSION="7 (Core)"
[2025-06-04 07:12:59] ID="centos"
[2025-06-04 07:12:59] ID_LIKE="rhel fedora"
[2025-06-04 07:12:59] VERSION_ID="7"
[2025-06-04 07:12:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:12:59] ANSI_COLOR="0;31"
[2025-06-04 07:12:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:12:59] HOME_URL="https://www.centos.org/"
[2025-06-04 07:12:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:12:59] 
[2025-06-04 07:12:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:12:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:12:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:12:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:12:59] 
[2025-06-04 07:12:59] 2025-06-04 11:12:47,887 | INFO     | **************************************
[2025-06-04 07:12:59] 2025-06-04 11:12:48,391 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 07:12:59] 2025-06-04 11:12:48,406 | INFO     | sufficient remaining disk space (32801554432 B)
[2025-06-04 07:12:59] 2025-06-04 11:12:48,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:12:59] 2025-06-04 11:12:48,407 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:12:59] 2025-06-04 11:12:48,407 | INFO     | update_server=False
[2025-06-04 07:12:59] 2025-06-04 11:12:48,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:12:59] 2025-06-04 11:12:48,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:12:59] 2025-06-04 11:12:48,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:12:59] 2025-06-04 11:12:48,408 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:12:59] 2025-06-04 11:12:48,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:12:59] 2025-06-04 11:12:48,409 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:12:59] 2025-06-04 11:12:48,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:12:59] 2025-06-04 11:12:48,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:12:59] 2025-06-04 11:12:48,686 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:12:59] 2025-06-04 11:12:48,687 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:12:59] 2025-06-04 11:12:48,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:12:59] 2025-06-04 11:12:48,687 | INFO     | will abort loop
[2025-06-04 07:12:59] 2025-06-04 11:12:48,941 | INFO     | all data control threads have been joined
[2025-06-04 07:12:59] 2025-06-04 11:12:49,412 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:49,413 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:49,456 | INFO     | all job control threads have been joined
[2025-06-04 07:12:59] 2025-06-04 11:12:49,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:49,692 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:49,842 | INFO     | all payload control threads have been joined
[2025-06-04 07:12:59] 2025-06-04 11:12:49,867 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:49,901 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:49,947 | INFO     | [data] control thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:49,972 | INFO     | [job] validate thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:50,266 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:50,414 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:50,418 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:50,457 | INFO     | [job] control thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:50,679 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:50,731 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:50,847 | INFO     | [payload] control thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:52,414 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:12:59] 2025-06-04 11:12:54,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139808979617600)>', '<ExcThread(monitor, started 139808559064832)>']
[2025-06-04 07:12:59] 2025-06-04 11:12:54,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:12:59] 2025-06-04 11:12:54,438 | INFO     | [monitor] control thread has ended
[2025-06-04 07:12:59] 2025-06-04 11:12:59,087 | INFO     | all workflow threads have been joined
[2025-06-04 07:12:59] 2025-06-04 11:12:59,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:12:59] 2025-06-04 11:12:59,088 | INFO     | traces error code: 0
[2025-06-04 07:12:59] 2025-06-04 11:12:59,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:12:59] 2025-06-04 11:12:59,203 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:12:59] 2025-06-04 11:12:59,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:12:59] 2025-06-04 11:12:59,209 [wrapper] pilotpid: 12497
[2025-06-04 07:12:59] 2025-06-04 11:12:59,212 [wrapper] Pilot exit status: 0
[2025-06-04 07:12:59] 2025-06-04 11:12:59,222 [wrapper] pandaids: 6678363289
[2025-06-04 07:12:59] 2025-06-04 11:12:59,253 [wrapper] cleanup supervisor_pilot 25430 12498
[2025-06-04 07:12:59] 2025-06-04 11:12:59,256 [wrapper] Test setup, not cleaning
[2025-06-04 07:12:59] 2025-06-04 11:12:59,258 [wrapper] apfmon messages muted
[2025-06-04 07:12:59] 2025-06-04 11:12:59,260 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:12:59] 2025-06-04 11:12:59,263 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:12:59]  *** Error codes and diagnostics ***
[2025-06-04 07:12:59]     "exeErrorCode": 0,
[2025-06-04 07:12:59]     "exeErrorDiag": "",
[2025-06-04 07:12:59]     "pilotErrorCode": 0,
[2025-06-04 07:12:59]     "pilotErrorDiag": "",
[2025-06-04 07:12:59]  *** Listing of results directory ***
[2025-06-04 07:12:59] total 396620
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:19 queuedata.json
[2025-06-04 07:12:59] -rwx------ 1 boincer umatlas     37140 Jun  4 01:20 runpilot2-wrapper.sh
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:12:59] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:23 run_atlas
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:23 job.xml
[2025-06-04 07:12:59] -rw-r--r-- 2 boincer umatlas 217519320 Jun  4 06:23 EVNT.45006593._002134.pool.root.1
[2025-06-04 07:12:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:23 start_atlas.sh
[2025-06-04 07:12:59] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:23 shared
[2025-06-04 07:12:59] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 06:23 input.tar.gz
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:23 boinc_lockfile
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:23 pandaJob.out
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas    986812 Jun  4 06:23 agis_schedconf.cvmfs.json
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas   1603667 Jun  4 06:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:12:59] drwx------ 4 boincer umatlas      4096 Jun  4 06:23 pilot3
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas      6051 Jun  4 07:09 init_data.xml
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas 183551110 Jun  4 07:12 HITS.45006595._053329.pool.root.1
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas        95 Jun  4 07:12 pilot_heartbeat.json
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas      1046 Jun  4 07:12 memory_monitor_summary.json
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:12 boinc_task_state.xml
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas    299758 Jun  4 07:12 log.45006595._053329.job.log.tgz.1
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas      7736 Jun  4 07:12 heartbeat.json
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:12 boinc_mmap_file
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:12 wrapper_checkpoint.txt
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas      4662 Jun  4 07:12 pilotlog.txt
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas    313449 Jun  4 07:12 log.45006595._053329.job.log.1
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas       357 Jun  4 07:12 output.list
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:12 runtime_log
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas    634880 Jun  4 07:12 result.tar.gz
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 07:12 runtime_log.err
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas       656 Jun  4 07:12 BtOKDmgjvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1MnKDmSuqHCn.diag
[2025-06-04 07:12:59] -rw-r--r-- 1 boincer umatlas     21650 Jun  4 07:12 stderr.txt
[2025-06-04 07:12:59] HITS file was successfully produced:
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas 183551110 Jun  4 07:12 shared/HITS.pool.root.1
[2025-06-04 07:12:59]  *** Contents of shared directory: ***
[2025-06-04 07:12:59] total 392820
[2025-06-04 07:12:59] -rw-r--r-- 2 boincer umatlas 217519320 Jun  4 06:23 ATLAS.root_0
[2025-06-04 07:12:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:23 start_atlas.sh
[2025-06-04 07:12:59] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 06:23 input.tar.gz
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas 183551110 Jun  4 07:12 HITS.pool.root.1
[2025-06-04 07:12:59] -rw------- 1 boincer umatlas    634880 Jun  4 07:12 result.tar.gz
07:13:00 (8890): run_atlas exited; CPU time 21542.288631
07:13:00 (8890): called boinc_finish(0)

</stderr_txt>
]]>

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