Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:48:08 (1266881): wrapper (7.7.26015): starting
13:48:08 (1266881): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 13:48:08] Arguments: --nthreads 12
[2025-06-06 13:48:08] Threads: 12
[2025-06-06 13:48:08] Checking for CVMFS
[2025-06-06 13:48:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 13:48:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 13:48:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 13:48:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 13:48:11] 2.12.7.0 19605 4630 55640 146860 2 56 3911510 4096001 912 130560 0 3242362 99.989 1106056 175 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 13:48:11] CVMFS is ok
[2025-06-06 13:48:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 13:48:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 13:48:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 13:48:11] Further information can be found at the LHC@home message board.
[2025-06-06 13:48:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 13:48:11] Checking for apptainer binary...
[2025-06-06 13:48:11] apptainer is not installed, using version from CVMFS
[2025-06-06 13:48:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 13:48:13] g630
[2025-06-06 13:48:13] apptainer works
[2025-06-06 13:48:14] Set ATHENA_PROC_NUMBER=12
[2025-06-06 13:48:14] Set ATHENA_CORE_NUMBER=12
[2025-06-06 13:48:14] Starting ATLAS job with PandaID=6678363276
[2025-06-06 13:48:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 20:24:27]  *** The last 200 lines of the pilot log: ***
[2025-06-06 20:24:27] 2025-06-06 20:24:14,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 20:24:27] 2025-06-06 20:24:14,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 20:24:27] 2025-06-06 20:24:14,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 20:24:27] 2025-06-06 20:24:14,587 | INFO     | fitting pss+swap vs Time
[2025-06-06 20:24:27] 2025-06-06 20:24:14,588 | INFO     | sum of square deviations: 17420801609.916443
[2025-06-06 20:24:27] 2025-06-06 20:24:14,593 | INFO     | sum of deviations: 250906422100.88522
[2025-06-06 20:24:27] 2025-06-06 20:24:14,593 | INFO     | mean x: 1749229672.4308095
[2025-06-06 20:24:27] 2025-06-06 20:24:14,593 | INFO     | mean y: 2599920.4673629245
[2025-06-06 20:24:27] 2025-06-06 20:24:14,593 | INFO     | -- intersect: -25191014493.49203
[2025-06-06 20:24:27] 2025-06-06 20:24:14,593 | INFO     | intersect: -25191014493.49203
[2025-06-06 20:24:27] 2025-06-06 20:24:14,594 | INFO     | chi2: 5.519097177694801
[2025-06-06 20:24:27] 2025-06-06 20:24:14,602 | INFO     | sum of square deviations: 16747434656.476254
[2025-06-06 20:24:27] 2025-06-06 20:24:14,604 | INFO     | sum of deviations: 273084846031.00027
[2025-06-06 20:24:27] 2025-06-06 20:24:14,605 | INFO     | mean x: 1749229519.936508
[2025-06-06 20:24:27] 2025-06-06 20:24:14,605 | INFO     | mean y: 2604881.0
[2025-06-06 20:24:27] 2025-06-06 20:24:14,605 | INFO     | -- intersect: -28520454556.047527
[2025-06-06 20:24:27] 2025-06-06 20:24:14,605 | INFO     | intersect: -28520454556.047527
[2025-06-06 20:24:27] 2025-06-06 20:24:14,605 | INFO     | chi2: 4.822580808593566
[2025-06-06 20:24:27] 2025-06-06 20:24:14,605 | INFO     | current chi2=4.822580808593566 (change=12.620114244702494 %)
[2025-06-06 20:24:27] 2025-06-06 20:24:14,605 | INFO     | right removable region: 377
[2025-06-06 20:24:27] 2025-06-06 20:24:14,606 | INFO     | sum of square deviations: 16747334006.476242
[2025-06-06 20:24:27] 2025-06-06 20:24:14,624 | INFO     | sum of deviations: 123819755637.66675
[2025-06-06 20:24:27] 2025-06-06 20:24:14,624 | INFO     | mean x: 1749229824.936508
[2025-06-06 20:24:27] 2025-06-06 20:24:14,624 | INFO     | mean y: 2628665.4444444445
[2025-06-06 20:24:27] 2025-06-06 20:24:14,624 | INFO     | -- intersect: -12930128834.585192
[2025-06-06 20:24:27] 2025-06-06 20:24:14,624 | INFO     | intersect: -12930128834.585192
[2025-06-06 20:24:27] 2025-06-06 20:24:14,625 | INFO     | chi2: 1.794515961230974
[2025-06-06 20:24:27] 2025-06-06 20:24:14,625 | INFO     | current chi2=1.794515961230974 (change=67.48533494783467 %)
[2025-06-06 20:24:27] 2025-06-06 20:24:14,625 | INFO     | sum of square deviations: 16091448128.010761
[2025-06-06 20:24:27] 2025-06-06 20:24:14,639 | INFO     | sum of deviations: 67813599841.2064
[2025-06-06 20:24:27] 2025-06-06 20:24:14,639 | INFO     | mean x: 1749229977.4423592
[2025-06-06 20:24:27] 2025-06-06 20:24:14,639 | INFO     | mean y: 2641651.2654155497
[2025-06-06 20:24:27] 2025-06-06 20:24:14,639 | INFO     | -- intersect: -7369074105.878362
[2025-06-06 20:24:27] 2025-06-06 20:24:14,640 | INFO     | intersect: -7369074105.878362
[2025-06-06 20:24:27] 2025-06-06 20:24:14,640 | INFO     | chi2: 1.0435170536990395
[2025-06-06 20:24:27] 2025-06-06 20:24:14,640 | INFO     | current chi2=1.0435170536990395 (change=41.849664408489076 %)
[2025-06-06 20:24:27] 2025-06-06 20:24:14,640 | INFO     | sum of square deviations: 15452911412.019009
[2025-06-06 20:24:27] 2025-06-06 20:24:14,652 | INFO     | sum of deviations: 48911165303.749954
[2025-06-06 20:24:27] 2025-06-06 20:24:14,652 | INFO     | mean x: 1749230129.9483695
[2025-06-06 20:24:27] 2025-06-06 20:24:14,652 | INFO     | mean y: 2646158.25
[2025-06-06 20:24:27] 2025-06-06 20:24:14,652 | INFO     | -- intersect: -5533972913.652531
[2025-06-06 20:24:27] 2025-06-06 20:24:14,652 | INFO     | intersect: -5533972913.652531
[2025-06-06 20:24:27] 2025-06-06 20:24:14,653 | INFO     | chi2: 0.9774754731067657
[2025-06-06 20:24:27] 2025-06-06 20:24:14,653 | INFO     | current chi2=0.9774754731067657 (change=6.328749526245956 %)
[2025-06-06 20:24:27] 2025-06-06 20:24:14,653 | INFO     | left removable region: 30
[2025-06-06 20:24:27] 2025-06-06 20:24:14,653 | INFO     | sum of square deviations: 12955403840.48981
[2025-06-06 20:24:27] 2025-06-06 20:24:14,675 | INFO     | sum of deviations: 28932237981.256485
[2025-06-06 20:24:27] 2025-06-06 20:24:14,675 | INFO     | mean x: 1749230404.4726224
[2025-06-06 20:24:27] 2025-06-06 20:24:14,675 | INFO     | mean y: 2663187.553314121
[2025-06-06 20:24:27] 2025-06-06 20:24:14,675 | INFO     | -- intersect: -3903749223.0024686
[2025-06-06 20:24:27] 2025-06-06 20:24:14,675 | INFO     | intersect: -3903749223.0024686
[2025-06-06 20:24:27] 2025-06-06 20:24:14,676 | INFO     | chi2: 0.005857427156719045
[2025-06-06 20:24:27] 2025-06-06 20:24:14,676 | INFO     | -- intersect: -3903749223.0024686
[2025-06-06 20:24:27] 2025-06-06 20:24:14,676 | INFO     | current memory leak: 2.23 B/s (using 347 data points, chi2=0.01)
[2025-06-06 20:24:27] 2025-06-06 20:24:14,676 | INFO     | ..............................
[2025-06-06 20:24:27] 2025-06-06 20:24:14,676 | INFO     | . Timing measurements:
[2025-06-06 20:24:27] 2025-06-06 20:24:14,676 | INFO     | . get job = 0 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,677 | INFO     | . initial setup = 10 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,677 | INFO     | . payload setup = 123 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,677 | INFO     | . stage-in = 0 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,677 | INFO     | . payload execution = 23395 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,677 | INFO     | . stage-out = 2 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,677 | INFO     | . log creation = 0 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,677 | INFO     | ..............................
[2025-06-06 20:24:27] 2025-06-06 20:24:14,938 | INFO     | 
[2025-06-06 20:24:27] 2025-06-06 20:24:14,938 | INFO     | job summary report
[2025-06-06 20:24:27] 2025-06-06 20:24:14,938 | INFO     | --------------------------------------------------
[2025-06-06 20:24:27] 2025-06-06 20:24:14,938 | INFO     | PanDA job id: 6678363276
[2025-06-06 20:24:27] 2025-06-06 20:24:14,938 | INFO     | task id: 45006595
[2025-06-06 20:24:27] 2025-06-06 20:24:14,938 | INFO     | errors: (none)
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | pilot state: finished 
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | transexitcode: 0
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | exeerrorcode: 0
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | exeerrordiag: 
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | exitcode: 0
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | exitmsg: OK
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | cpuconsumptiontime: 30299 s
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | nevents: 400
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | neventsw: 0
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | pid: 1276901
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | pgrp: 1276901
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | corecount: 12
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | event service: False
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | sizes: {0: 2396514, 1: 2397222, 2: 2397421, 13: 2397421, 24: 2397477, 35: 2397505, 41: 2397867, 46: 2397895, 23523: 2431399, 23527: 2440442, 23603: 2440556}
[2025-06-06 20:24:27] 2025-06-06 20:24:14,939 | INFO     | --------------------------------------------------
[2025-06-06 20:24:27] 2025-06-06 20:24:14,940 | INFO     | 
[2025-06-06 20:24:27] 2025-06-06 20:24:14,940 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 20:24:27] 2025-06-06 20:24:15,278 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 20:24:27] 2025-06-06 20:24:15,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 20:24:27] 2025-06-06 20:24:15,280 | INFO     | job 6678363276 has completed (purged errors)
[2025-06-06 20:24:27] 2025-06-06 20:24:15,280 | INFO     | overall cleanup function is called
[2025-06-06 20:24:27] 2025-06-06 20:24:16,286 | INFO     | --- collectZombieJob: --- 10, [1276901]
[2025-06-06 20:24:27] 2025-06-06 20:24:16,286 | INFO     | zombie collector waiting for pid 1276901
[2025-06-06 20:24:27] 2025-06-06 20:24:16,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 20:24:27] 2025-06-06 20:24:16,286 | INFO     | collected zombie processes
[2025-06-06 20:24:27] 2025-06-06 20:24:16,286 | INFO     | will attempt to kill all subprocesses of pid=1276901
[2025-06-06 20:24:27] 2025-06-06 20:24:16,512 | INFO     | process IDs to be killed: [1276901] (in reverse order)
[2025-06-06 20:24:27] 2025-06-06 20:24:16,567 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 20:24:27] 2025-06-06 20:24:16,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 20:24:27] 2025-06-06 20:24:16,569 | INFO     | did not find any defunct processes belonging to 1276901
[2025-06-06 20:24:27] 2025-06-06 20:24:16,583 | INFO     | did not find any defunct processes belonging to 1276901
[2025-06-06 20:24:27] 2025-06-06 20:24:16,583 | INFO     | ready for new job
[2025-06-06 20:24:27] 2025-06-06 20:24:16,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 20:24:27] 2025-06-06 20:24:16,584 | INFO     | **************************************
[2025-06-06 20:24:27] 2025-06-06 20:24:16,585 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 20:24:27] 2025-06-06 20:24:16,585 | INFO     | **************************************
[2025-06-06 20:24:27] 2025-06-06 20:24:16,585 | INFO     | 
[2025-06-06 20:24:27] 2025-06-06 20:24:16,606 | INFO     | architecture information:
[2025-06-06 20:24:27] 2025-06-06 20:24:16,662 | INFO     | executing command: cat /etc/os-release
[2025-06-06 20:24:27] 2025-06-06 20:24:16,746 | INFO     | cat /etc/os-release:
[2025-06-06 20:24:27] NAME="CentOS Linux"
[2025-06-06 20:24:27] VERSION="7 (Core)"
[2025-06-06 20:24:27] ID="centos"
[2025-06-06 20:24:27] ID_LIKE="rhel fedora"
[2025-06-06 20:24:27] VERSION_ID="7"
[2025-06-06 20:24:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 20:24:27] ANSI_COLOR="0;31"
[2025-06-06 20:24:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 20:24:27] HOME_URL="https://www.centos.org/"
[2025-06-06 20:24:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 20:24:27] 
[2025-06-06 20:24:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 20:24:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 20:24:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 20:24:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 20:24:27] 
[2025-06-06 20:24:27] 2025-06-06 20:24:16,746 | INFO     | **************************************
[2025-06-06 20:24:27] 2025-06-06 20:24:17,250 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 20:24:27] 2025-06-06 20:24:17,286 | INFO     | sufficient remaining disk space (183844732928 B)
[2025-06-06 20:24:27] 2025-06-06 20:24:17,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 20:24:27] 2025-06-06 20:24:17,287 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 20:24:27] 2025-06-06 20:24:17,287 | INFO     | update_server=False
[2025-06-06 20:24:27] 2025-06-06 20:24:17,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 20:24:27] 2025-06-06 20:24:17,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 20:24:27] 2025-06-06 20:24:17,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 20:24:27] 2025-06-06 20:24:17,398 | INFO     | all job control threads have been joined
[2025-06-06 20:24:27] 2025-06-06 20:24:17,558 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 20:24:27] 2025-06-06 20:24:17,558 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 20:24:27] 2025-06-06 20:24:17,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:24:27] 2025-06-06 20:24:17,558 | INFO     | will abort loop
[2025-06-06 20:24:27] 2025-06-06 20:24:17,690 | INFO     | all payload control threads have been joined
[2025-06-06 20:24:27] 2025-06-06 20:24:17,847 | INFO     | PID=1270466 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 20:24:27] 2025-06-06 20:24:17,847 | INFO     | .. there are 2 such processes running
[2025-06-06 20:24:27] 2025-06-06 20:24:17,847 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 20:24:27] 2025-06-06 20:24:17,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 20:24:27] 2025-06-06 20:24:17,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 20:24:27] 2025-06-06 20:24:17,930 | INFO     | all data control threads have been joined
[2025-06-06 20:24:27] 2025-06-06 20:24:18,290 | INFO     | [job] retrieve thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:18,406 | INFO     | [job] control thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:18,562 | INFO     | [job] job monitor thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:18,570 | INFO     | [job] validate thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:18,574 | INFO     | [payload] validate_post thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:18,698 | INFO     | [payload] control thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:18,942 | INFO     | [data] control thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,050 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,066 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,066 | INFO     | [data] copytool_in thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,098 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,266 | INFO     | [payload] failed_post thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,294 | INFO     | [data] copytool_out thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:19,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:24:27] 2025-06-06 20:24:20,970 | INFO     | [job] queue monitor thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:21,302 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 20:24:27] 2025-06-06 20:24:21,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234483996480)>', '<ExcThread(monitor, started 140233819543296)>']
[2025-06-06 20:24:27] 2025-06-06 20:24:21,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 20:24:27] 2025-06-06 20:24:21,862 | INFO     | [monitor] control thread has ended
[2025-06-06 20:24:27] 2025-06-06 20:24:26,386 | INFO     | all workflow threads have been joined
[2025-06-06 20:24:27] 2025-06-06 20:24:26,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 20:24:27] 2025-06-06 20:24:26,386 | INFO     | traces error code: 0
[2025-06-06 20:24:27] 2025-06-06 20:24:26,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 20:24:27] 2025-06-06 20:24:27,078 [wrapper] ==== pilot stdout END ====
[2025-06-06 20:24:27] 2025-06-06 20:24:27,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 20:24:27] 2025-06-06 20:24:27,242 [wrapper] pilotpid: 1270466
[2025-06-06 20:24:27] 2025-06-06 20:24:27,252 [wrapper] Pilot exit status: 0
[2025-06-06 20:24:27] 2025-06-06 20:24:27,304 [wrapper] pandaids: 6678363276
[2025-06-06 20:24:27] 2025-06-06 20:24:27,363 [wrapper] cleanup supervisor_pilot 1357560 1270467
[2025-06-06 20:24:27] 2025-06-06 20:24:27,371 [wrapper] Test setup, not cleaning
[2025-06-06 20:24:27] 2025-06-06 20:24:27,383 [wrapper] apfmon messages muted
[2025-06-06 20:24:27] 2025-06-06 20:24:27,394 [wrapper] ==== wrapper stdout END ====
[2025-06-06 20:24:27] 2025-06-06 20:24:27,403 [wrapper] ==== wrapper stderr END ====
[2025-06-06 20:24:27]  *** Error codes and diagnostics ***
[2025-06-06 20:24:27]     "exeErrorCode": 0,
[2025-06-06 20:24:27]     "exeErrorDiag": "",
[2025-06-06 20:24:27]     "pilotErrorCode": 0,
[2025-06-06 20:24:27]     "pilotErrorDiag": "",
[2025-06-06 20:24:27]  *** Listing of results directory ***
[2025-06-06 20:24:27] total 394872
[2025-06-06 20:24:27] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 20:24:27] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:19 queuedata.json
[2025-06-06 20:24:27] -rwx------ 1 boinc boinc     37140 Jun  4 05:20 runpilot2-wrapper.sh
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc       100 Jun  6 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 20:24:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 13:48 run_atlas
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc       105 Jun  6 13:48 job.xml
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc      9280 Jun  6 13:48 init_data.xml
[2025-06-06 20:24:27] -rw-r--r-- 2 boinc boinc 217519320 Jun  6 13:48 EVNT.45006593._002134.pool.root.1
[2025-06-06 20:24:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 13:48 start_atlas.sh
[2025-06-06 20:24:27] drwxrwx--x 2 boinc boinc      4096 Jun  6 13:48 shared
[2025-06-06 20:24:27] -rw-r--r-- 2 boinc boinc    508883 Jun  6 13:48 input.tar.gz
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc         0 Jun  6 13:48 boinc_lockfile
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 13:48 pandaJob.out
[2025-06-06 20:24:27] -rw------- 1 boinc boinc    985728 Jun  6 13:49 agis_schedconf.cvmfs.json
[2025-06-06 20:24:27] drwx------ 4 boinc boinc      4096 Jun  6 13:49 pilot3
[2025-06-06 20:24:27] -rw------- 1 boinc boinc 177766943 Jun  6 20:21 HITS.45006595._053316.pool.root.1
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc       530 Jun  6 20:21 boinc_task_state.xml
[2025-06-06 20:24:27] -rw------- 1 boinc boinc      1018 Jun  6 20:22 memory_monitor_summary.json
[2025-06-06 20:24:27] -rw------- 1 boinc boinc   1598969 Jun  6 20:22 agis_ddmendpoints.agis.ALL.json
[2025-06-06 20:24:27] -rw------- 1 boinc boinc    519490 Jun  6 20:22 log.45006595._053316.job.log.tgz.1
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 20:24 boinc_mmap_file
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc        28 Jun  6 20:24 wrapper_checkpoint.txt
[2025-06-06 20:24:27] -rw------- 1 boinc boinc      7656 Jun  6 20:24 heartbeat.json
[2025-06-06 20:24:27] -rw------- 1 boinc boinc        95 Jun  6 20:24 pilot_heartbeat.json
[2025-06-06 20:24:27] -rw------- 1 boinc boinc      4957 Jun  6 20:24 pilotlog.txt
[2025-06-06 20:24:27] -rw------- 1 boinc boinc   2090160 Jun  6 20:24 log.45006595._053316.job.log.1
[2025-06-06 20:24:27] -rw------- 1 boinc boinc       357 Jun  6 20:24 output.list
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc       620 Jun  6 20:24 runtime_log
[2025-06-06 20:24:27] -rw------- 1 boinc boinc   2631680 Jun  6 20:24 result.tar.gz
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc      8944 Jun  6 20:24 runtime_log.err
[2025-06-06 20:24:27] -rw------- 1 boinc boinc       651 Jun  6 20:24 RnEODmfjvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoMnKDmfQPqfm.diag
[2025-06-06 20:24:27] -rw-rw-r-- 1 boinc boinc     21151 Jun  6 20:24 stderr.txt
[2025-06-06 20:24:27] HITS file was successfully produced:
[2025-06-06 20:24:27] -rw------- 1 boinc boinc 177766943 Jun  6 20:21 shared/HITS.pool.root.1
[2025-06-06 20:24:27]  *** Contents of shared directory: ***
[2025-06-06 20:24:27] total 389124
[2025-06-06 20:24:27] -rw-r--r-- 2 boinc boinc 217519320 Jun  6 13:48 ATLAS.root_0
[2025-06-06 20:24:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 13:48 start_atlas.sh
[2025-06-06 20:24:27] -rw-r--r-- 2 boinc boinc    508883 Jun  6 13:48 input.tar.gz
[2025-06-06 20:24:27] -rw------- 1 boinc boinc 177766943 Jun  6 20:21 HITS.pool.root.1
[2025-06-06 20:24:27] -rw------- 1 boinc boinc   2631680 Jun  6 20:24 result.tar.gz
20:24:29 (1266881): run_atlas exited; CPU time 30414.315012
20:24:29 (1266881): called boinc_finish(0)

</stderr_txt>
]]>

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