Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 12:37:25 (55752): Detected: vboxwrapper 26206
2025-06-04 12:37:25 (55752): Detected: BOINC client v8.2.1
2025-06-04 12:37:25 (55752): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-06-04 12:37:25 (55752): Detected: Sandbox Configuration Enabled
2025-06-04 12:37:25 (55752): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 12:37:25 (55752): Create VM. (boinc_cc0e1be6526e720d, slot#2)
2025-06-04 12:37:25 (55752): Setting Memory Size for VM. (4300MB)
2025-06-04 12:37:25 (55752): Setting CPU Count for VM. (3)
2025-06-04 12:37:25 (55752): Setting Chipset Options for VM.
2025-06-04 12:37:26 (55752): Setting Graphics Controller Options for VM.
2025-06-04 12:37:26 (55752): Setting Boot Options for VM.
2025-06-04 12:37:26 (55752): Setting Network Configuration for NAT.
2025-06-04 12:37:26 (55752): Enabling VM Network Access.
2025-06-04 12:37:26 (55752): Disabling USB Support for VM.
2025-06-04 12:37:26 (55752): Disabling COM Port Support for VM.
2025-06-04 12:37:26 (55752): Disabling Audio Support for VM.
2025-06-04 12:37:26 (55752): Disabling Clipboard Support for VM.
2025-06-04 12:37:26 (55752): Disabling Drag and Drop Support for VM.
2025-06-04 12:37:26 (55752): Adding storage controller(s) to VM.
2025-06-04 12:37:26 (55752): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 12:37:27 (55752): Adding VirtualBox Guest Additions to VM.
2025-06-04 12:37:27 (55752): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 12:37:27 (55752): forwarding host port 51894 to guest port 80
2025-06-04 12:37:27 (55752): Enabling remote desktop for VM.
2025-06-04 12:37:27 (55752): Required extension pack not installed, remote desktop not enabled.
2025-06-04 12:37:27 (55752): Enabling shared directory for VM.
2025-06-04 12:37:27 (55752): Starting VM using VBoxManage interface. (boinc_cc0e1be6526e720d, slot#2)
2025-06-04 12:37:30 (55752): Successfully started VM. (PID = '55823')
2025-06-04 12:37:30 (55752): Reporting VM Process ID to BOINC.
2025-06-04 12:37:30 (55752): Guest Log: BIOS: VirtualBox 7.1.6
2025-06-04 12:37:30 (55752): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 12:37:30 (55752): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 12:37:30 (55752): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 12:37:30 (55752): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 12:37:30 (55752): Detected: Web Application Enabled (http://localhost:51894)
2025-06-04 12:37:30 (55752): Preference change detected
2025-06-04 12:37:30 (55752): Setting CPU throttle for VM. (60%)
2025-06-04 12:37:30 (55752): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 12:37:32 (55752): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 12:37:32 (55752): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 12:37:35 (55752): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 12:37:35 (55752): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 12:37:35 (55752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 12:37:41 (55752): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 12:37:41 (55752): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 12:37:50 (55752): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.000139 main     Log opened 2025-06-04T11:37:47.991738000Z
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.000226 main     OS Product: Linux
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.000265 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.000301 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.000338 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.000339 main     Process ID: 1284
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.000340 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 12:37:50 (55752): Guest Log: 00:00:00.001620 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 12:38:10 (55752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 12:38:10 (55752): Guest Log: [INFO] Mounting shared directory
2025-06-04 12:38:10 (55752): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 12:39:13 (55752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 12:39:13 (55752): Guest Log: [INFO] Detected branch: prod
2025-06-04 12:39:18 (55752): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 12:39:18 (55752): Guest Log: Copying input files
2025-06-04 12:39:21 (55752): Guest Log: Copied input files into RunAtlas.
2025-06-04 12:39:21 (55752): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 12:39:21 (55752): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 12:39:21 (55752): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 12:39:21 (55752): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 12:40:24 (55752): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 12:40:30 (55752): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 12:40:30 (55752): Guest Log: 2.6.3.0 1605 1 30120 146779 4 1 3117617 4096000 0 65024 0 0 n/a 1 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 12:40:31 (55752): Guest Log: copied the webapp to /var/www
2025-06-04 12:40:31 (55752): Guest Log: ATHENA_PROC_NUMBER=3
2025-06-04 12:40:31 (55752): Guest Log: ATHENA_CORE_NUMBER=3
2025-06-04 12:40:36 (55752): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 12:40:36 (55752): Guest Log:  *** Starting ATLAS job. (PandaID=6678363431 taskID=45006595) ***
2025-06-04 14:17:07 (55752): Status Report: Elapsed Time: '6000.000000'
2025-06-04 14:17:07 (55752): Status Report: CPU Time: '14053.670000'
2025-06-04 14:55:11 (55752): Guest Log:  *** Job finished ***
2025-06-04 14:55:11 (55752): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:20,210 | INFO     | [data] copytool_out thread has finished
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:20,943 | INFO     | [job] queue monitor thread has finished
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:21,527 | INFO     | [data] queue_monitor thread has finished
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:22,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525110544192)>', '<ExcThread(monitor, started 140524509964032)>']
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:23,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:23,227 | INFO     | [monitor] control thread has ended
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,727 | INFO     | all workflow threads have been joined
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,727 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,727 | INFO     | traces error code: 0
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,838 [wrapper] ==== pilot stdout END ====
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,844 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,861 [wrapper] pilotpid: 5954
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:27,869 [wrapper] Pilot exit status: 0
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:28,080 [wrapper] pandaids: 6678363431
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:28,190 [wrapper] cleanup supervisor_pilot  4881 5955
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:28,200 [wrapper] Test setup, not cleaning
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:28,281 [wrapper] apfmon messages muted
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:28,287 [wrapper] ==== wrapper stdout END ====
2025-06-04 14:55:11 (55752): Guest Log: 2025-06-04 13:55:28,293 [wrapper] ==== wrapper stderr END ====
2025-06-04 14:55:11 (55752): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 14:55:11 (55752): Guest Log:     "exeErrorCode": 0,
2025-06-04 14:55:11 (55752): Guest Log:     "exeErrorDiag": "",
2025-06-04 14:55:11 (55752): Guest Log:     "pilotErrorCode": 0,
2025-06-04 14:55:11 (55752): Guest Log:     "pilotErrorDiag": "",
2025-06-04 14:55:11 (55752): Guest Log:  *** Listing of results directory ***
2025-06-04 14:55:11 (55752): Guest Log: total 179620
2025-06-04 14:55:11 (55752): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:58 pilot3.tar.gz
2025-06-04 14:55:11 (55752): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 05:22 queuedata.json
2025-06-04 14:55:11 (55752): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 05:24 runpilot2-wrapper.sh
2025-06-04 14:55:11 (55752): Guest Log: -rw-r-----. 1 atlas atlas     15093 Jun  4 11:39 start_atlas.sh
2025-06-04 14:55:11 (55752): Guest Log: -rw-r-----. 1 atlas atlas    508883 Jun  4 11:39 input.tar.gz
2025-06-04 14:55:11 (55752): Guest Log: -rw-r--r--. 1 atlas atlas      7588 Jun  4 11:39 init_data.xml
2025-06-04 14:55:11 (55752): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 11:39 EVNT.45006593._002140.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 14:55:11 (55752): Guest Log: -rw-r--r--. 1 atlas atlas      2526 Jun  4 11:40 pandaJob.out
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas    986812 Jun  4 11:43 agis_schedconf.cvmfs.json
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 11:43 agis_ddmendpoints.agis.ALL.json
2025-06-04 14:55:11 (55752): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 11:43 pilot3
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas 178466992 Jun  4 13:52 HITS.45006595._053471.pool.root.1
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  4 13:52 memory_monitor_summary.json
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas    246047 Jun  4 13:53 log.45006595._053471.job.log.tgz.1
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 13:55 pilot_heartbeat.json
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas      7692 Jun  4 13:55 heartbeat.json
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  4 13:55 pilotlog.txt
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas    604758 Jun  4 13:55 log.45006595._053471.job.log.1
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 13:55 output.list
2025-06-04 14:55:11 (55752): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 13:55 runtime_log
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas    870400 Jun  4 13:55 result.tar.gz
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas       658 Jun  4 13:55 eTENDmmmvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnmaKDm1XYA7m.diag
2025-06-04 14:55:11 (55752): Guest Log: -rw-r--r--. 1 atlas atlas      8597 Jun  4 13:55 runtime_log.err
2025-06-04 14:55:11 (55752): Guest Log: Looking for outputfile HITS.45006595._053471.pool.root.1
2025-06-04 14:55:11 (55752): Guest Log: HITS file was successfully produced
2025-06-04 14:55:11 (55752): Guest Log: -rw-------. 1 atlas atlas 178466992 Jun  4 13:52 /home/atlas/RunAtlas/HITS.45006595._053471.pool.root.1
2025-06-04 14:55:11 (55752): Guest Log: Successfully finished the ATLAS job!
2025-06-04 14:55:11 (55752): Guest Log: Copying the results back to the shared directory!
2025-06-04 14:55:12 (55752): Guest Log:  *** Contents of shared directory: ***
2025-06-04 14:55:12 (55752): Guest Log: total 214152
2025-06-04 14:55:12 (55752): Guest Log: -rw-rw----. 1 root root 217880206 Jun  4 11:37 ATLAS.root_0
2025-06-04 14:55:12 (55752): Guest Log: -rw-rw-r--. 1 root root      7588 Jun  4 11:37 init_data.xml
2025-06-04 14:55:12 (55752): Guest Log: -rw-rw----. 1 root root    508883 Jun  4 11:37 input.tar.gz
2025-06-04 14:55:12 (55752): Guest Log: -rw-r--r--. 1 root root    870400 Jun  4 13:55 result.tar.gz
2025-06-04 14:55:12 (55752): Guest Log: -rw-rw----. 1 root root     15093 Jun  4 11:37 start_atlas.sh
2025-06-04 14:55:12 (55752): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 14:55:12 (55752): VM Completion File Detected.
2025-06-04 14:55:12 (55752): Powering off VM.
2025-06-04 14:55:12 (55752): Successfully stopped VM.
2025-06-04 14:55:12 (55752): Deregistering VM. (boinc_cc0e1be6526e720d, slot#2)
2025-06-04 14:55:12 (55752): Removing network bandwidth throttle group from VM.
2025-06-04 14:55:12 (55752): Removing VM from VirtualBox.
14:55:17 (55752): called boinc_finish(0)

</stderr_txt>
]]>

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